ライフサイエンスコーパス: vertices

1 decorated by large spikes around the 5-fold vertices.

2 tment necessary for hydroxylation of the B-H vertices.

3 with the formation of holes at the five-fold vertices.

4 ted with the magnetic frustration at the bar vertices.

5 on of contents by tightly sealing the capsid vertices.

6 the pentameric protein forming the fivefold vertices.

7 on, and can be readily functionalized at its vertices.

8 heterodimer are found at each of the capsid vertices.

9 ed pore that surrounds each of the 12 5-fold vertices.

10 yed in five copies around each of the capsid vertices.

11 membrane protrusions extending from the cell vertices.

12 capsids) had tufts of protein located at the vertices.

13 o individual pathways with approximately 100 vertices.

14 er domains present in Sec13 and Sec31 at the vertices.

15 unicated across polyhedral faces, edges, and vertices.

16 in which back-mutations occur only at hybrid vertices.

17 py to be located predominantly at the capsid vertices.

18 e symmetric Yfh1 trimer at each of its eight vertices.

19 other locations, including the remaining 11 vertices.

20 en individuals place offspring into adjacent vertices.

21 borhoods and short average distances between vertices.

22 which we call the core, having n(clog log n) vertices.

23 long simple paths are compacted into single vertices.

24 ke depression around each of the 12 fivefold vertices.

25 ing the two capsid layers at the icosahedral vertices.

26 l clique problem for a simple graph with six vertices.

27 attached gold label, at one of the 12 capsid vertices.

28 dimers, probably by completion of hexameric vertices.

29 ell decorated with spikes at its icosahedral vertices.

30 id lattices and attachment proteins at their vertices.

31 t encircles each of the icosahedral fivefold vertices.

32 ng may occur at one or more of the 12 virion vertices.

33 2 molecules are located near the icosahedral vertices.

34 9 kDa) but none on the 12 VP5 pentons at its vertices.

35 th alternating UPy and B21C7 groups at their vertices.

36 ferromagnetic domain walls through Y-shaped vertices.

37 y representing the drugs and side effects as vertices.

38 tric FXN(42-210) trimer at each of its eight vertices.

39 edges and the B-box and RING domains at the vertices.

40 at contain exclusively mer-coordinated metal vertices.

41 modified with 10nm Au NPs at the other three vertices.

42 ormation to identify the neighborhood of the vertices.

43 r), while networks allow for multiple parent vertices.

44 quired to stabilize the capsid shells at the vertices.

45 ks in the cell polarity protein Par3 at cell vertices.

46 iates, which become the capsid's icosahedral vertices.

47 es epitaxially growing out of the cubic core vertices.

48 or the removal of an edge between a pair of vertices.

49 re ultimately occupied by 5-fold icosahedral vertices.

50 Fullerene cages have n trivalent vertices, 12 pentagonal faces, and (n-20)/2 hexagonal fa

51 classified RNA structures as graphs up to 10 vertices (~200 nucleotides) into three classes: existing

52 RAG resource for large tree graphs up to 13 vertices (~260 nucleotides), thereby cataloging more tha

53 n of fullerene cages (with n three connected vertices, 3n/2 edges, 12 pentagonal faces, and (n-20)/2

54 ed trees and studies the distribution of the vertices according to their altitude.

55 n procapsid has 30A wide pores at the 3-fold vertices and 20A wide gaps between F pentamers as a resu

56 erene with adjacent pentagons is one with 60 vertices and a ring of interleaved hexagons and pentagon

57 9 small clathrin cage isomers with n< or =60 vertices and adjacent pentagons, the Rule permits just 1

58 computing the spherical coordinates of their vertices and calculating the solid angle subtended, and

59 ce of the pipeline for its ability to detect vertices and cell-cell contacts, track cells, and identi

60 We identify the vertices and centers of the pentagons forming the pentil

61 an octahedron, or an icosahedron with the T vertices and connecting edges of a "Goldberg triangle."

62 vesicle coats, is composed of polygons with vertices and edges forming a membrane-proximal lattice t

63 space O(E), where V and E are the number of vertices and edges in the network, respectively.

64 or layer that is well positioned beneath the vertices and edges of the Sec13-31 lattice.

65 al is incorporated into one of the 12 capsid vertices and excluded from all other locations, includin

66 complex, the structure located at the capsid vertices and involved in host receptor binding.

67 capsid and tegument is limited to the capsid vertices and involves two minor capsid proteins, pUL17 a

68 ons and thus isolated from each other has 60 vertices and is shaped like a soccer ball.

69 Scaffold strands are used to integrate the vertices and lines into fully assembled structures displ

70 meworks comprising metal-carboxylate cluster vertices and long, branched organic linkers are the most

71 ret-like densities were found on icosahedral vertices and may represent a unique adaptation similar t

72 rks on the order of hundreds of thousands of vertices and millions of edges.

73 Both the vertices and the walls are complex chiral objects with w

74 s expand continuously by the addition of new vertices, and (ii) new vertices attach preferentially to

75 ls have complex cages that contain up to 264 vertices, and are constructed from as many as 7,524 atom

76 in which protein domains are represented as vertices, and domain combinations, defined as instances

77 kaging ATPase P4 are mounted over the 5-fold vertices, and monomers of the RNA-dependent RNA polymera

78 eled sites (71% in C capsids) were at capsid vertices, and most stained C capsids had label at more t

79 ded RNA molecules via channels on the 5-fold vertices, and transcripts probably exit the mature capsi

80 gument is known to contact the capsid at its vertices, and two proteins, UL36 and UL37, have been ide

81 ial structures are described by graphs where vertices are connected with their nearest neighbours.

82 reas in the other class, termed type II, the vertices are essentially eclipsed.

83 in phase space forms a convex polytope whose vertices are indicative of the dominant underlying react

84 capsids show that CTDs at five-fold symmetry vertices are most protected.

85 olygons of finite size, and in which all the vertices are related to one another by symmetry operatio

86 In our approach, the vertices are represented by n x 4 multi-arm junctions (n

87 Vertices are selectively enriched in the Rab GTPase Ypt7

88 d polytopes) in gene expression space, whose vertices are the expression profiles optimal for each ta

89 ected behaviours when the signal between the vertices are time delayed.

90 Almost all vertices are within distance log log n of the core altho

91 We identified the tricellular vertices as a specialized membrane domain marked by the

92 pUL25 is found at each of the capsid vertices as part of the capsid vertex-specific component

93 ducts from chlorination of the unsubstituted vertices as well as sigma-bonds of the cluster framework

94 incorporate six electroactive groups at its vertices, as exemplified by a facile synthesis of a repr

95 , the distribution function of the number of vertices at a given altitude and the distribution functi

96 nce log log n of the core although there are vertices at distance log n from the core.

97 Label was not observed at multiple vertices, at nonvertex sites, or in capsids lacking pUL6

98 y the addition of new vertices, and (ii) new vertices attach preferentially to sites that are already

99 tex, the median age by which 50% of cortical vertices attained peak area was 14.6 years (SE = .03) in

100 ertex to 'ankles' of triskelions centred two vertices away.

101 formation of B-O and B-N bonds at all boron vertices (B(2), B(4), B(5), and B(9)) of meta-carborane.

102 Gaussian curvature gets concentrated in the vertices, being zero elsewhere.

103 l models only take into account the matching vertices between two sites that are defined by a fixed n

104 ral-like arrangement: pure oils being at the vertices, binary mixtures at the edges, and ternary mixt

105 coat protein nucleates at each of the 5-fold vertices, but not at the stargate, and then spreads outw

106 The v-SNARE Vti1p is enriched at vertices by a distinct pathway that is independent of th

107 ssemble in vitro into procapsids with vacant vertices called "whiffleballs".

108 of the local strain thus imposed at multiple vertices can then lead to disassembly.

109 -) anions form a polydeltahedron that has 78 vertices [Cd(II) or NO(3)(-)] (V), 228 edges (E), and 15

110 the data to shapes with different numbers of vertices, compute their statistical significance, and in

111 In particular, the frequency of vertices connected to exactly k other vertices follows a

112 fs, which are planar and flexible, such that vertices connecting simultaneously trigonal and square p

113 xample of a three-membered ring with all the vertices constituted by pentacoordinate phosphorus.

114 CLAN vertices contained the actin-binding proteins alpha-acti

115 ne tasks: cells fill out a tetrahedron whose vertices correspond to key tasks related to maturation,

116 dges consist of double helical DNA and whose vertices correspond to the branch points.

117 this family can be described by tilings with vertices corresponding to subsets of a quasi-lattice tha

118 consider the genome as a weighted graph with vertices defined by loci on a chromosome and the edge we

119 ises an interesting question: how are portal vertices defined during morphogenesis if their incorpora

120 ecifically in the cells around multicellular vertices, disrupted the rate and directionality of new i

121 exhibit hierarchical organization, in which vertices divide into groups that further subdivide into

122 d protein phosphatase 1) accumulate at these vertices during docking.

123 rbon atoms self-assemble into larger (n > 60 vertices) empty cages as well-but only the few that obey

124 In accord with this cooperativity, vertices enriched in one fusion catalyst are enriched in

125 ally symmetric particle with deeply recessed vertices, expands to the spherical mature capsid, increa

126 the DNA-assisted binding properties of their vertices, facilitate the well-defined topological connec

127 ncy of vertices connected to exactly k other vertices follows a power-law distribution.

128 An iterative selection of vertices for consideration based on non-decreasing commo

129 uses a molecular frame designed with encoded vertices for particle placement.

130 pectral data are represented in a graph with vertices for putative residues (of unknown relation to t

131 by removing three adjacent high-connectivity vertices from the eleven-vertex closo polyhedron.

132 (k) approximately k(-3/2), for the number of vertices (genes) with k connections was observed for thr

133 ity for the sides and tuned directed organic vertices has opened the door to other types of novel mat

134 Edges connect vertices if their corresponding genotypes differ in a si

135 and 3- and 4-phosphoinositides accumulate at vertices in a mutually interdependent manner.

136 Sungear represents multiple datasets as vertices in a polygon.

137 e and shape are compatible with formation of vertices in an icosahedral shell.

138 e P22 scaffold protein may define the portal vertices in an indirect manner, possibly by regulating t

139 The central vertices in complex networks are of particular interest

140 ffold strand can traverse through individual vertices in multiple directions.

141 of those that have no adjacent unsubstituted vertices in positions 7-12; three others showed some ind

142 This effect favors spatial proximity of vertices in the dense colloidal crystal and may be consi

143 with ripening time and the number of protein vertices in the microscopy images declined, indicative o

144 rarily designed connections between selected vertices in three-dimensional space remains a challenge.

145 ork in order to generate coordinates for the vertices in two or three dimensions, which are subsequen

146 ich consists of determining a minimal set of vertices in which removal leaves the network broken into

147 A base-set X for N is a subset of vertices including the root (or outgroup), all leaves, a

148 hedral capsids exhibited distinct facets and vertices, indicating that they are icosahedral like the

149 se data suggest that incorporation of portal vertices into heads occurs during growth of the coat lat

150 rhombus tiling in which an ordered array of vertices is embedded within a nonperiodic framework with

151 tion patterns (including Si, SiR, and SiR(2) vertices) is reported.

152 tices, each featuring basic zinc carboxylate vertices joined by trans-stilbene, analogous to the isor

153 ted to the decycling problem (the removal of vertices, leaving the graph acyclic).

154 ivity information is taken into account, and vertices may appear in none or several of the subnetwork

155 In trees, vertices may have only a single parent (ancestor), while

156 hat allow gp23 to substitute for gp24 at the vertices modify the interactions between monomers within

157 outwardly k-neighborly if every subset of k vertices not including 0 spans a face of P.

158 ge turret-like appendages at the icosahedral vertices, observed heterogeneous glycosylation of the ca

159 ertex of DNA parallelograms, to two or three vertices of 3D-DX DNA triangle motifs, and to every vert

160 solid-state structure, the two unsubstituted vertices of 9 strongly interact in a staggered propellan

161 we take up the case in which X is the set of vertices of a convex polygon in.

162 tion of the C-terminal I domain of E2 at the vertices of a dodecahedron.

163 equatorial oxygen atoms are shared with the vertices of a FeO6 octahedron and of a phosphate tetrahe

164 by cryo-electron tomography showed that all vertices of a given capsid were either in a compact or a

165 Trimers of receptor dimers lie at the vertices of a hexagonal lattice in a "two-facing-two" co

166 Deep learning reveals features of vertices of a large network that can be adapted in accom

167 which the TNF-receptor dimer-sitting at the vertices of a large supramolecular receptor network of l

168 id cells in parahippocampal cortices fire at vertices of a periodic triangular grid that spans the en

169 4 discrete and unique objects placed at the vertices of a rectangle.

170 n approach--encoding of DNA sequences as the vertices of a regular simplex--that allows simultaneous

171 fields spread across the environment on the vertices of a regular tessellating triangular grid.

172 ioxane (POSS) molecular nanoparticles at the vertices of a rigid tetrahedral framework.

173 dissociation or a rapid exchange between the vertices of a tetrameric core and free THF molecules.

174 gold atoms); (b) 12 gold atoms that form the vertices of an icosahedron around the central atom, whos

175 induced substitution reactions on the boron vertices of carboranes and boranes is noted.

176 wer law random graphs in which the number of vertices of degree k is proportional to 1kbeta for some

177 virus protein UL25 attaches to the external vertices of herpes simplex virus type 1 capsids and is r

178 lates Src/cortactin/F-actin complexes at the vertices of hexagonal equatorial cells for cell-to-cell

179 cluster, points of extension matching the 12 vertices of hexagonal-prism d6R, with 4-connected (4-c)

180 r coalescence of individual plaques into the vertices of multicell contacts.

181 the root (or outgroup), all leaves, and all vertices of outdegree 1.

182 rtex whose firing fields are arranged at the vertices of tessellating equilateral triangles [1].

183 structural protein located underneath the 12 vertices of the adenoviral capsid.

184 Pentameric vertices of the capsid are occupied by complexes compose

185 to pU(L)31 protein bind to densities at the vertices of the capsid, a location consistent with that

186 24 of bacteriophage T4 forms the pentameric vertices of the capsid.

187 cluster, points of extension matching the 12 vertices of the cuboctahedron (cuo), with 3-connected or

188 varied both the metal ions presented at the vertices of the ferritin nodes (Zn(II), Ni(II), and Co(I

189 bubbles: one occupies positions beneath the vertices of the icosahedral surface shell, and the other

190 ounced dependency on the number of edges and vertices of the networks being considered.

191 o be due to the sticking of particles at the vertices of the oppositely charged polymer networks.

192 organized in sets of three at each of the 20 vertices of the pentagonal dodecahedral core.

193 In one, designated type I, the vertices of the two hexagonal layers are partially stagg

194 atenin had a distinctive localization to the vertices of these hexagonally shaped differentiating len

195 The four vertices of this tetrahedron are each enriched with gene

196 Superior kinetics of (100) facets at the vertices of truncated octahedral particles promote prefe

197 sembling a hollow skewed cube with node-like vertices of two sizes.

198 rtactin-Y466, actin and EphA2 cluster at the vertices of wild-type hexagonal epithelial cells in orga

199 The RAG update here up to 13 vertices offers a useful graph-based tool for exploring

200 ion in graphs, where sequences are viewed as vertices on a weighted graph, each pair of sequences is

201 f the CCSC are located at each of the capsid vertices on DNA-containing capsids.

202 tegy to differentiate at least one of the 12 vertices on the B12(2-) core.

203 ragment interacts with three of the [BCH(3)] vertices on the lower surface of the cage, similar to th

204 e that the products no longer exchange their vertices once they have formed.

205 the 216,739 large cages with 60 < n <or= 84 vertices, only the 50 IPR ones.

206 The stochastic addition of either vertices or connections in a network leads to the observ

207 ial clusters as a two-dimensional network of vertices or stochastic interacting particles and follow

208 stargate, and then spreads outward from the vertices over the surface, merging seamlessly to complet

209 e fibers contacted both fivefold symmetrical vertices (pentons) and sixfold symmetrical faces (hexons

210 cells and in vitro, vacuole fusion occurs at vertices rather than from a central pore expanding radia

211 a transoid sandwich with two pairs of carbon vertices reflected through a center of symmetry, but tha

212 We build a graph where the vertices represent all k-mers in the input sequences, an

213 A genotype network is a graph in which vertices represent genotypes that have the same phenotyp

214 ariety of weighted, directed, random graphs; vertices represent individuals and edges interactions be

215 of states within a polyhedron, in which the vertices represent specialists at key tasks.

216 ismal Protein Domain Universe Graph (oPDUG); vertices represent types of structural domains and edges

217 circle is determined by the position of the vertices represented in the intersection and the area of

218 omers affect the positions of the pentameric vertices, resulting in different triangulation numbers i

219 o a curtailed sphere; and finally moving the vertices so as to minimise a physically-inspired deforma

220 ture, show how pentamers are accommodated at vertices, support the inference that nucleation is a cru

221 n icosahedral procapsid with recessed 5-fold vertices that subsequently undergoes major structural ch

222 ilize the hexon shell, thus rendering penton vertices the weakest links of the adenovirus capsid.

223 Considering the geometry of the vertices, the C termini must be more crowded at the five

224 reinforcing the mechanical sturdiness of the vertices, the most stressed part of the capsids.IMPORTAN

225 ime-consistency and separation of the hybrid vertices, the network itself can also be reconstructed f

226 iding the stitched outline into a mesh whose vertices then are mapped onto a curtailed sphere; and fi

227 hosen at random with an increasing number of vertices, then, by a suitable normalization, the distrib

228 rotein was found to underlie the icosahedral vertices: this is tentatively assigned as a storage form

229 of portal protein at one of the icosahedral vertices through which the DNA enters, and approximately

230 ortal situated beneath one of the pentameric vertices, thus removing uncertainty over the location an

231 ual to the number of shortest paths from all vertices to all others that pass through that node.

232 particular zinc-adeninate building units, as vertices to construct bio-MOF-100, an exclusively mesopo

233 By using two vertices to encode each logical bit, we obtain universal

234 fold vertices to open, and the quasi-sixfold vertices to flatten, explaining the effects of HAP1 on a

235 Nb bonds, that are linked through shared O/F vertices to form a 3D structure configurationally isotyp

236 O(12) trioctahedra) that are linked by their vertices to form columns parallel to the c-axis with a s

237 rude from the liganded capsid, the threefold vertices to open, and the quasi-sixfold vertices to flat

238 The observed movements cause the fivefold vertices to protrude from the liganded capsid, the three

239 ta-sheets) within a graph and by mapping the vertices to the primary sequence.

240 the network by probabilistically coalescing vertices, using vertex attributes to determine the proba

241 s equilateral pentagons and the angle at the vertices was 110 degrees.

242 transfer of chiral information between metal vertices were analyzed, and the general principles under

243 Only mer vertices were observed, as opposed to the statistical fa

244 line segments, consistent with a shape whose vertices were occluded.

245 AREs, whereas both t-SNAREs will localize to vertices when trans-pairing of SNAREs is blocked.

246 r epithelium but only insert apically at the vertices where multiple outer cells make contact.

247 o occupy positions closer to adjacent 5-fold vertices where they conduct replication and transcriptio

248 ic capsomers is greatest around the fivefold vertices, where there is the largest deviation from a pl

249 ules are found at or near each of the capsid vertices, where they are exposed on the capsid surface.

250 mbrane that contacts adjacent vacuoles, and "vertices," where boundary and outside membrane meet.

251 s by converging into transient multicellular vertices which resolve through the assembly of new cell

252 Moreover, it can find the key vertices which, when immunized, can effectively reduce t

253 tion of connections between existing pair of vertices, while others capture deletion; the removal of

254 ssembly hierarchy, is most enriched at those vertices with abundant Ypt7p, which is at the start of t

255 persistence in amine cages by tying the cage vertices with carbonyls such as formaldehyde.

256 that lack translational symmetry and contain vertices with different numbers of interacting elements.

257 are regular polygons with eight, nine or ten vertices with each edge bridged by an oxide and two piva

258 hrin heavy chains continue inwards under the vertices with local 3-fold symmetry, the terminal domain

259 rritin nodes decorated on their C3 symmetric vertices with Zn coordination sites were connected via a

260 ng the 5,769 possible small cages (n <or= 60 vertices) with adjacent pentagons, only 15; the soccer b

261 A series of four-arm junctions are used as vertices within a network of double-helical DNA fragment

262 e network is mediated by protein IIIa at the vertices, within group-of-six (GOS) tiles--a penton base