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1 of the loop E motif of Potato spindle tuber viroid.
2 nd replication cycle resemble those of plant viroids.
3 dulate the hammerhead cleavage properties in viroids.
4 utations in loop E motifs of PSTVd and other viroids.
5 cally favored for the vast majority of these viroids.
6 me is structurally related to those of plant viroids.
7 ion of AGO1, AGO2, AGO4, and AGO5 attenuated viroid accumulation, supporting their role in antiviroid
8 usly were found in satellite RNAs from plant viroids and in repetitive DNA from certain species of ne
9 ion regarding the pathogenesis mechanisms of viroids and perhaps other infectious RNAs.IMPORTANCE Num
10 ne extended hammerheads derived from natural viroids and satellite RNAs were constructed with the goa
11 d, information for all sequences of viruses, viroids and satellites of plants, fungi and protozoa tha
12 central source of information about viruses, viroids and satellites of plants, fungi and protozoa.
13 This CCC RNA is the smallest among all known viroids and virusoids and the only one that codes protei
22 s) supports the notion that DCLs also target viroids but does not clarify whether vd-sRNAs activate o
23 small RNAs in infected plants suggests that viroids can trigger RNA silencing in a host, raising the
25 treme case, pathogenic ncRNAs alone (such as viroids) can infect eukaryotic organisms, leading to dis
26 based on complementary Coconut Cadang-Cadang Viroid (CCCVd) RNA sequence, was covalently bonded onto
29 accumulation in these plants of 21- to 24-nt viroid-derived small RNAs (vd-sRNAs) supports the notion
35 ystem, resemble the plant pathogens known as viroids in their structure, mode of generation and funct
36 processes, and developmental patterns makes viroid infection a valuable system in which to investiga
39 ar activities underlying nuclear-replicating viroid infection processes in plants, including effects
40 ed RNA replication is essential for viral or viroid infection, as well as for regulation of cellular
41 to 24 nucleotides (nt) in plants infected by viroids (infectious non-protein-coding RNAs of just 250
42 comprehensive genome-wide analyses of plant-viroid interactions and discover several novel molecular
48 l principles and offer perspectives on using viroid models to continue advancing some frontiers of li
56 larly, rod-like RNAs of potato spindle tuber viroid (PSTVd) and avocado sunblotch viroid (ASBVd) were
57 presumably cleavage of Potato spindle tuber viroid (PSTVd) and closely related members of the family
58 folding pathways of the potato spindle tuber viroid (PSTVd) and the host killing mechanism of Escheri
60 omain (T(L)) of the potato spindle tuber RNA viroid (PSTVd) constitutes one of its five structural el
65 tion of an RNA motif in Potato spindle tuber viroid (PSTVd) required for trafficking from palisade me
66 benthamiana infected by potato spindle tuber viroid (PSTVd) were agroinfiltrated with plasmids expres
67 nstrated that like with Potato spindle tuber viroid (PSTVd), a satRNA associated with Cucumber Mosaic
68 inia virus (TYLCSV) and potato spindle tuber viroid (PSTVd), co-infect their common host tomato, we o
69 , as represented by the Potato spindle tuber viroid (PSTVd), replicate in the nucleus by utilizing DN
74 a remarkable example of parasitic strategy, viroids reprogram for their replication the template and
75 examples of groundbreaking contributions of viroid research to the development of new biological pri
76 le-stranded (ss) DNA geminiviruses and ssRNA viroids, respectively, but both pathogens can counteract
77 RNAs, the predicted secondary structure of a viroid RNA contains many loops and bulges flanked by dou
78 otif that the noncoding Potato spindle tuber viroid RNA evolved to potentiate its efficient trafficki
81 sm consisting of transcription of oligomeric viroid RNA intermediates, cleavage to unit-length strand
85 genetic evidence for the essential role of a viroid RNA three-dimensional motif in rolling-circle rep
86 assays with an analogous tomato planta macho viroid (-)RNA resulted in a much larger fraction of infe
88 f a complex mixture of coconut cadang-cadang viroid RNAs revealed the presence of relatively large am
89 cally the infectivity of monomeric (-)strand viroid RNAs, we have developed a ribozyme-based expressi
93 uction of small RNAs of Potato spindle tuber viroid (srPSTVds) and investigating how PSTVd responds t
94 rize recent advances in the understanding of viroid structures and cellular factors enabling these fu
95 RNA transcripts of the potato spindle tuber viroid, suggesting that RIPs may target invading nucleic
98 benthamiana infected by potato spindle tuber viroid, the endogenous AGO1 and distinct AGOs from Arabi
99 For potato spindle tuber (PSTVd) and related viroids, the possible role of a circular (-)strand RNA a
101 Selected endogenous RNAs, viral RNAs, and viroids traffic between specific cells or organs via thi
102 ated upon infection of a nuclear-replicating viroid, which is a new concept that helps to understand
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