ライフサイエンスコーパス: whole-genome sequence

1 pe similarity >90% (>84% for HDV-1) over the whole genome sequence.

2 uinolone susceptibility were determined from whole genome sequences.

3 in all key measures of performance on human whole-genome sequences.

4 time polymerase chain reaction (rt-PCR), and whole genome sequencing.

5 s opportunities and challenges introduced by whole-genome sequencing.

6 hybrid population over the past decade using whole-genome sequencing.

7 reaction analysis, slide agglutination, and whole-genome sequencing.

8 of closely-related bacteria on the basis of whole-genome sequencing.

9 and we characterized this interaction using whole-genome sequencing.

10 Serotype was determined by whole-genome sequencing.

11 o recurrent MDD was partitioned using sparse whole-genome sequencing.

12 n yaks using high-density SNP genotyping and whole-genome sequencing.

13 rom individual Drosophila melanogaster using whole-genome sequencing.

14 d using standard microbiological methods and whole-genome sequencing.

15 hism analysis, targeted gene sequencing, and whole-genome sequencing.

16 have opened new possibilities for 'benchtop' whole-genome sequencing.

17 , 2008-2013, using both long- and short-read whole-genome sequencing.

18 rganoids, followed by delayed subcloning and whole-genome sequencing.

19 eight drugs, confirmatory Wayne's assay, and whole-genome sequencing.

20 in mutDNA using Tagged-Amplicon- and shallow Whole Genome- Sequencing.

21 By combining very deep whole genome sequencing ( 1000-fold genome-wide coverage

22 We whole genome sequenced 223 randomly selected M. tubercul

23 Whole genome sequencing a collection of the first MRSA i

24 data analysis from targeted, whole-exome, or whole-genome sequencing a wellspring to identify new SNP

25 Using whole-genome sequence analysis and clinically relevant m

26 We conducted whole-genome sequence analysis on C. trachomatis isolate

27 Whole-genome sequence analysis showed that most of the B

28 Whole-genome sequence analysis was used to assess the ph

29 Comparative whole-genome sequencing analysis of emm32.2 iGAS and non

30 Whole-genome sequencing analysis of lung adenocarcinomas

31 Whole genome sequence and phylogenetic analyses of selec

32 Evolved strains can be analyzed by whole genome sequencing and an array of omics technologi

33 diagnostic samples were characterized using whole genome sequencing and combined with epidemiologica

34 We also did whole genome sequencing and core genome multilocus seque

35 To achieve this, we conducted whole genome sequencing and lung function tests in 19 Ar

36 Whole genome sequencing and quantitative real-time polym

37 combination of resistant mutant generation, whole genome sequencing and recombineering to identify t

38 ene expression as a quantitative trait using whole genome-sequencing and transcriptome analysis allow

39 were identified and renamed based on cassava whole-genome sequence and their sequence similarity with

40 ates of H. parasuis that had previously been whole-genome sequenced and a further 84 isolates from th

41 aweeds is slower despite the availability of whole-genome sequences and model organisms for the major

42 antiviral RNAi in Arabidopsis thaliana Using whole-genome sequencing and a computational pipeline, we

43 Whole-genome sequencing and a genome-wide association st

44 in Brassicaceae and pave the way for future whole-genome sequencing and assembly efforts in this as

45 s with the blaOXA-232 gene were subjected to whole-genome sequencing and chromosome single-nucleotide

46 ypic diversity and characterize clones using whole-genome sequencing and doubling time measurements.

47 We subjected these strains to whole-genome sequencing and evolutionary convergence ana

48 mprised 95 primary PDAC cases that underwent whole-genome sequencing and expression microarray on bul

49 In this study, we used whole-genome sequencing and gene expression profiling of

50 cal immunology, as well as new approaches of whole-genome sequencing and genes newly reported to be a

51 e genomic approach includes a combination of whole-genome sequencing and genome-wide microarray techn

52 In this study, whole-genome sequencing and high-resolution (13)C-metabo

53 allele for rs74315329 were identified using whole-genome sequencing and imputation data (based on 10

54 Whole-genome sequencing and induced pluripotent stem cel

55 We used whole-genome sequencing and phylogenetic analysis to inv

56 We tested this hypothesis using whole-genome sequencing and transcriptomic data, and we

57 Isolates were cultured and their whole genome sequenced, and we used the threshold of 40

58 ncluding molecular tests and next-generation whole-genome sequencing, and their potential for clinica

59 tro for 4 years, with 279 clones sampled for whole genome sequencing at different time points.

60 icient way, with the single goal of enabling whole-genome sequencing at scale.

61 Using a whole genome sequencing-based approach, we developed two

62 ogy via large-scale imputation and exome and whole-genome sequence-based association studies.

63 imputing from denser reference panels, until whole-genome sequencing becomes feasible in large sample

64 We determined whole-genome sequences by Illumina paired-reads sequenci

65 Whole-genome sequences can be used to improve viral clas

66 Whole-genome sequencing can measure of the heterogeneity

67 Ninety-four whole genome sequenced "CF negative" isolates were searc

68 collected during a 9-month period, including whole genome sequences; clinical tests, metabolomes, pro

69 al xenografts and spheroids by high-coverage whole-genome sequencing, clustering of genetic aberratio

70 Whole genome sequencing, conducted on two unaffected par

71 Whole genome sequencing confirmed the ocular vOka strain

72 a large number of synthetic whole exome and whole genome sequences, covering a wide range of disease

73 We accessed whole genome sequence data for 2,283 MRSA isolates from

74 l swab data, and combined these results with whole genome sequence data.

75 In the tests with whole genome sequencing data from 1000 Genomes Project,

76 or several RNA-Seq data sets, as well as the whole genome sequencing data that was used in the constr

77 Whole genome sequencing data were analyzed for rare pLoF

78 With the availability of massive whole genome sequencing data, it becomes practical to mi

79 PennCNV original algorithm for array data in whole genome sequencing data, we processed mapping (BAM)

80 ntegrating downstream analysis functions for whole genome sequencing data.

81 ve associations impacted by batch effects in whole genome sequencing data.

82 ls to identify and mitigate batch effects in whole genome sequencing data.

83 Here, we queried whole-genome sequence data from 1,916 patients across 24

84 We analyzed whole-genome sequence data from families affected by Alz

85 14,255 AF cases and 374,939 controls, using whole-genome sequence data from the Icelandic population

86 rsatility and speed of SEQSpark, we analyzed whole-genome sequence data from the UK10K, testing for a

87 We generated deep, whole-genome sequence data of 17 individuals in a three-

88 election operating on IGRs in bacteria using whole-genome sequence data sets.

89 tive forces operating on bacterial IGRs from whole-genome sequence data, and suggests that our curren

90 ionships among closely-related bacteria from whole-genome sequence data.

91 We present deep whole-genome sequencing data ( approximately 38x) from 2

92 Here using a large whole-genome sequencing data bank, cancer registry and c

93 Using whole-genome sequencing data from 163 vervets sampled fr

94 We used whole-genome sequencing data from 2,619 individuals thro

95 We have applied BeviMed to whole-genome sequencing data from 6,586 individuals with

96 reads - on simulated sequencing data and 10X whole-genome sequencing data from the NA12878 human geno

97 This study compares whole-genome sequencing data obtained from chemo-naive a

98 The analysis of human whole-genome sequencing data presents significant comput

99 However, whole-genome sequencing data revealed at least five inde

100 es tumor content in cfDNA from 0.1x coverage whole-genome sequencing data without prior knowledge of

101 increasingly available genotyping tools and whole-genome sequencing data, and argue for a better int

102 tationally fast, enabling the application to whole-genome sequencing data, and straightforward to imp

103 mbining high-coverage exome and low-coverage whole-genome sequencing data, utilizing information from

104 and on hundreds of thousands of samples with whole-genome sequencing data.

105 germline structural variation breakpoints in whole-genome sequencing data.

106 and ten other statistics are applied to the whole genome sequencing dataset from the TwinsUK study.

107 tifies causative variants in whole exome and whole genome sequencing datasets and provides a powerful

108 Lep-MAP3, capable of mapping high-throughput whole genome sequencing datasets.

109 ell suited for large, possible low-coverage, whole genome sequencing datasets.

110 r and prioritize variants in whole exome and whole genome sequencing datasets.

111 ype-based genomic identification, we applied whole-genome sequencing, detailed phenotyping, and stati

112 An analysis of whole genome sequence diversity among 153 A:cc5 isolates

113 C biopsy specimens in this region, revealing whole-genome sequence diversity.

114 typing assay based on target enrichment and whole-genome sequencing (eWGS).

115 cation tolerance, we produced a high-quality whole-genome sequence for the resurrection plant Xerophy

116 The reduced costs of sequencing have led to whole-genome sequences for a large number of microorgani

117 scribing data (1998-2014) were combined with whole genome sequences from 4045 national and internatio

118 he shift in the host preference, we analyzed whole genome sequences from laboratory and natural popul

119 Population genomic analyses of whole-genome sequences from 32 individuals showed that g

120 Here we examined a data set of whole-genome sequences from 5,310 M. tuberculosis isolat

121 Here we report analysis of whole-genome sequences from cutaneous, acral and mucosal

122 gation using 3,059 newly generated low-depth whole-genome sequences from eight European isolates and

123 105X mean physical coverage and linked-read whole-genome sequencing from 10X Genomics, we document s

124 umannii isolates previously characterized by whole-genome sequencing from the CDC-FDA Antibiotic Resi

125 Whole-genome sequencing gives unprecedented power to det

126 generation of resistant mutants followed by whole genome sequencing has often been successful in unc

127 More recently, M. tuberculosis whole-genome sequencing has been used to estimate popula

128 A deluge of whole-genome sequencing has begun to give insights into

129 l tools for copy-number variation calling in whole genome sequencing have been published, the noisy n

130 Whole-exome and whole-genome sequencing have facilitated the large-scale

131 Whole genome sequencing identified a highly expressed FG

132 Whole genome sequencing identified a likely pair of bios

133 Whole-genome sequencing identified a premature stop codo

134 Whole-genome sequencing identified common blaNDM-positiv

135 In addition, whole-genome sequencing identified mutations enriched in

136 Whole-genome sequencing identified specific genes associ

137 Whole-exome sequencing and whole-genome sequencing identified the same homozygous S

138 Whole genome sequencing in 98 Hutterites, a founder popu

139 mportance and power of strain validation and whole genome sequencing in this context.

140 Here, we describe the utility of whole-genome sequencing in defining nosocomial VREfm tra

141 ive South African families and SNP array and whole-genome sequencing in two Norwegian families, we id

142 ucture to facilitate the analysis of related whole genome sequences, in both a population and compara

143 However, the whole-genome sequence is sometimes needed for higher res

144 Whole-genome sequencing is an increasingly important com

145 Whole genome sequencing mixes the signals of sampled pop

146 with inherited retinal disease, who have had whole-genome sequencing (n = 605), whole-exome sequencin

147 We report the approximately 1.79 Gb draft whole genome sequence of reference genotype Tift 23D2B1-

148 The whole genome sequence of six isolates of this collection

149 We analyzed whole genome sequences of 1,680 Streptococcus pneumoniae

150 We used whole genome sequences of 469 B. pseudomallei isolates f

151 Whole genome sequencing of CFW-passaged strains showed n

152 de of inhibition of these compounds based on whole genome sequencing of spontaneous resistant mutants

153 Whole genome sequencing of UNG/SMUG1-deficient tumours r

154 Here we use whole-genome sequences of normal blood from 241 adults t

155 Whole-genome sequences of representative highly pathogen

156 Phylogenomic analysis using whole-genome sequences of STEC strains available in the

157 We performed whole-genome sequencing of 102 primary PanNETs and defin

158 Using whole-genome sequencing of 11 262 Icelanders, we found 1

159 ally multi-allelic clusters, identified from whole-genome sequencing of 228 DO mice.

160 Phylogenetic analysis based on whole-genome sequencing of 250 isolates revealed two maj

161 To address this issue, we carried out 60x whole-genome sequencing of 26 metastases from four patie

162 mutations in an additional 182 families, and whole-genome sequencing of 4 of the remaining 242 famili

163 Whole-genome sequencing of all patients allowed exclusio

164 We used comparative whole-genome sequencing of chemically mutagenized and na

165 er controlled laboratory conditions; and (4) whole-genome sequencing of clinical and environmental is

166 Here, we show whole-genome sequencing of DNA and RNA in 94 Chinese ind

167 We are performing whole-genome sequencing of families with autism spectrum

168 Based on whole-genome sequencing of four parents and 12 offspring

169 iable-number-of-tandem-repeat genotyping and whole-genome sequencing of isolates.

170 er with in vitro microbiology approaches and whole-genome sequencing of Methanomicrobium mobile, a ke

171 We used whole-genome sequencing of multiple isogenic chicken DT4

172 We further performed whole-genome sequencing of nosocomial MDRPa strains to e

173 Whole-genome sequencing of pathogens from host samples b

174 In conclusion, whole-genome sequencing of samples obtained following ne

175 SNPs, with SNP calls closely concordant with whole-genome sequencing of selected lines.

176 ely to contribute to susceptibility, we used whole-genome sequencing of subjects with clinically extr

177 rtants, vaccine strains, and field isolates, whole-genome sequencing of the M. gallisepticum vaccine

178 Here we used whole-genome sequencing of the proposed serovar 16 refer

179 Whole-genome sequencing of three mangrove species furthe

180 Here, we performed whole genome sequencing on DNA from two affected individ

181 ycoplasma hominis isolates were subjected to whole-genome sequencing on the Illumina NextSeq platform

182 es individual-level phenotypes and realistic whole-genome sequence or SNP data.

183 al isolates previously characterized through whole-genome sequencing or targeted PCR as to the presen

184 Molecular analyses were performed using whole-genome sequencing or whole-exome sequencing.

185 Recently, a whole-genome sequencing project was launched on the wild

186 In this study, we optimized whole-genome sequencing protocols for poliovirus isolate

187 lenged by screening on admission studies and whole-genome sequencing, providing evidence for an endog

188 We filtered whole-genome sequencing results to include only rare var

189 Whole genome sequencing revealed little to no off-target

190 Surprisingly, whole genome sequencing revealed that the coastal region

191 Whole genome sequencing revealed that the strain carried

192 the outbreak strains from flour samples, and whole-genome sequencing revealed that the isolates from

193 Whole-genome sequencing revealed the deletion of uhpT en

194 olony mutants were subjected to MIC testing, whole-genome sequencing, reverse transcription-quantitat

195 Whole-genome sequencing revised 93% of karyotypes and de

196 y of data types, including exome sequencing, whole-genome sequencing, RNA-seq, ChIP-seq, targeted seq

197 genetics tool for analysing large cohorts of whole-genome sequenced samples.

198 Whole-genome sequencing showed close relationships betwe

199 A whole-genome sequence signature analysis identified 3 am

200 (PTC), applying a combined linkage-based and whole-genome sequencing strategy and identified an in-fr

201 We performed whole-genome sequencing, structural modelling and cytoge

202 genes from publicly available whole-exome or whole-genome sequencing studies (4167 probands plus 1786

203 riants of unknown significance identified in whole-genome sequencing studies.

204 We used a novel HPV whole-genome sequencing technique to evaluate an excepti

205 So, with the increasing popularity of whole genome sequencing, the need has emerged for a fast

206 Here, we make use of worldwide whole-genome sequences to assess the impact of processes

207 Specifically, we utilize 7,444 whole-genome sequences to examine the effect of variants

208 Here we use whole-genome sequences to examine the origin and adaptat

209 ychotic illness and herald the importance of whole-genome sequencing to appreciate the overall genomi

210 We used whole-genome sequencing to characterize cholera across t

211 applied molecular genetics, proteomics, and whole-genome sequencing to demonstrate that the MMAR_003

212 he need for prescreening of patients through whole-genome sequencing to ensure safety.

213 We used whole-genome sequencing to investigate intrafamilial spr

214 We used single-cell whole-genome sequencing to perform genome-wide somatic s

215 Here, we used whole-genome sequencing to scan high-altitude Andeans fo

216 We used whole-genome sequencing to show that Tomelo does not car

217 Whole-genome sequencing uncovered a catastrophic genome

218 both feeding tubes and faecal samples, were whole genome sequenced using Illumina, Mi-Seq, which rev

219 Isolates were analysed by next-generation whole-genome sequencing using Illumina and Pacific Biosc

220 Progress in whole-genome sequencing using short-read (e.g., <150 bp)

221 Whole-genome sequencing was applied to investigate the g

222 Whole-genome sequencing was performed on all isolates, a

223 Shallow whole-genome sequencing was performed on an Illumina pla

224 Whole-genome sequencing was performed on DNA from patien

225 Whole-genome sequencing was performed on human and fish

226 Whole-genome sequencing was performed on isolates from c

227 Whole-genome sequencing was performed on study isolates

228 Whole-genome sequencing was performed, and using single

229 Here, whole-genome sequencing was used to demonstrate nosocomi

230 Whole-exome sequencing or whole-genome sequencing was used to identify the causati

231 Whole-genome sequencing was used to perform multilocus s

232 With the advent of whole genome sequencing we are in the midst of a paradig

233 Using exome and whole genome sequencing, we identified recurrent mutatio

234 genotyping and dense imputation mapping from whole-genome sequencing, we tested almost nine million g

235 Spoligotyping and whole-genome sequencing were performed to ascertain homo

236 l-time polymerase chain reaction (qPCR), and whole-genome sequencing were performed.

237 However, compared to whole genome sequencing, WES introduces more biases and

238 iew of the literature we included 65 E. coli whole genome sequences (WGS), adding 6 recently sequence

239 Deep whole genome sequencing (WGS) allows for the comprehensi

240 Whole exome sequencing and whole genome sequencing (WGS) are entering clinical use,

241 Whole genome sequencing (WGS) can refine our understandi

242 Whole genome sequencing (WGS) confirmed that the A. gamb

243 netic and phylodynamic analyses to bacterial whole genome sequencing (WGS) data have become essential

244 Whole genome sequencing (WGS) is a promising strategy to

245 ong with other forms of genetic variation in whole genome sequencing (WGS) projects involving populat

246 Microbial whole genome sequencing (WGS) provides a potential solut

247 olates (LHL and LGL) were subjected to three whole genome sequencing (WGS) runs with different device

248 We further performed a whole genome sequencing (WGS) scan for Alzherimer's dise

249 To obtain a more complete view, whole genome sequencing (WGS) was analyzed in a large co

250 Whole genome sequencing (WGS) was performed to produce a

251 Whole genome sequencing (WGS) was performed to produce a

252 ty using agar dilution, and characterised by whole genome sequencing (WGS).

253 e-wide Analysis of Palindrome Formation) and whole genome sequencing (WGS).

254 g a discovery population of individuals with whole-genome sequence (WGS) data from the UK10K project

255 Based on high-depth whole-genome sequence (WGS) from 265 individuals, the AG

256 Recently, whole-genome sequences (WGS) of many human and animal pa

257 Whole-genome sequencing (WGS) allows for a comprehensive

258 ciated with these outbreaks were analyzed by whole-genome sequencing (WGS) analysis.

259 We applied a hybrid whole-genome sequencing (WGS) and deep imputation approa

260 Whole-genome sequencing (WGS) can generate antibiotic su

261 Whole-genome sequencing (WGS) can help by providing comp

262 Whole-genome sequencing (WGS) can provide excellent reso

263 ocomial cases, we aimed to determine whether whole-genome sequencing (WGS) could be used to support o

264 Whole-genome sequencing (WGS) could offer significant ad

265 Whole-genome sequencing (WGS) data are being generated a

266 Whole-genome sequencing (WGS) data enable the improvemen

267 Using simulations and whole-genome sequencing (WGS) data from multiple differe

268 le X syndrome, is challenging for short-read whole-genome sequencing (WGS) data.

269 The application of whole-genome sequencing (WGS) has become routine for tra

270 Whole-genome sequencing (WGS) has the potential to accel

271 Whole-genome sequencing (WGS) identified a homozygous de

272 We performed whole-genome sequencing (WGS) in 197 individuals with un

273 n-based Estonian Biobank using high-coverage whole-genome sequencing (WGS) in 2,284 samples and SNP g

274 Whole-genome sequencing (WGS) in asymptomatic adults mig

275 Whole-genome sequencing (WGS) is a newer alternative for

276 Whole-genome sequencing (WGS) is an emerging and powerfu

277 Whole-genome sequencing (WGS) makes it possible to deter

278 million sequence variants identified through whole-genome sequencing (WGS) of 15,220 Icelanders for a

279 port approximately 9.5 million variants from whole-genome sequencing (WGS) of a Cretan-isolated popul

280 Whole-genome sequencing (WGS) of clinical bacterial isol

281 We used whole-genome sequencing (WGS) of consecutive C. difficil

282 serotyping, multilocus sequence typing, and whole-genome sequencing (WGS) of selected strains, we st

283 e performed whole-exome sequencing (WES) and whole-genome sequencing (WGS) on AVM tissue from affecte

284 A viral whole-genome sequencing (WGS) strategy, based on PCR amp

285 This study used whole-genome sequencing (WGS) to determine strain relate

286 ureus bloodstream infections (BSIs) and used whole-genome sequencing (WGS) to identify factors associ

287 otransposon capture sequencing (mRC-seq) and whole-genome sequencing (WGS) to pedigrees of C57BL/6J a

288 The organism-specific bioinformatics whole-genome sequencing (WGS) typing pipelines at Public

289 ive NPCs, with 15 cases subjected to further whole-genome sequencing (WGS), to determine its mutation

290 robiology laboratories underwent culture and whole-genome sequencing (WGS), using WGS to identify tox

291 e using pulsed-field gel electrophoresis and whole-genome sequencing (WGS).

292 ducted antifungal susceptibility testing and whole-genome sequencing (WGS).

293 nsertion/deletion (indel) variants from deep whole-genome sequencing (WGS).

294 tection, and outbreak investigation by using whole-genome sequencing (WGS).

295 bset of patients from the Western Cape using whole-genome sequencing (WGS; n=149), a cough aerosol sa

296 ements, based on variants identified through whole-genome sequencing, which included 4,657 Icelandic

297 cotton, and a new-generation approach to the whole-genome sequencing, which will lead to the referenc

298 Large sample sets of whole genome sequencing with deep coverage are being gen

299 hIP-seq, targeted sequencing and single-cell whole-genome sequencing, with a minimal requirement for

300 MRSA isolates underwent whole-genome sequencing, with a pairwise single-nucleoti