ライフサイエンスコーパス: whole-genome sequencing

1 time polymerase chain reaction (rt-PCR), and whole genome sequencing.

2 s opportunities and challenges introduced by whole-genome sequencing.

3 hybrid population over the past decade using whole-genome sequencing.

4 reaction analysis, slide agglutination, and whole-genome sequencing.

5 and we characterized this interaction using whole-genome sequencing.

6 of closely-related bacteria on the basis of whole-genome sequencing.

7 Serotype was determined by whole-genome sequencing.

8 o recurrent MDD was partitioned using sparse whole-genome sequencing.

9 n yaks using high-density SNP genotyping and whole-genome sequencing.

10 rom individual Drosophila melanogaster using whole-genome sequencing.

11 d using standard microbiological methods and whole-genome sequencing.

12 hism analysis, targeted gene sequencing, and whole-genome sequencing.

13 MRSA isolate from each individual underwent whole-genome sequencing.

14 thousands of generations were determined by whole-genome sequencing.

15 y the genomes of neurons from adult mice for whole-genome sequencing.

16 tic landscape of aggressive tumors via deep, whole-genome sequencing.

17 have opened new possibilities for 'benchtop' whole-genome sequencing.

18 , 2008-2013, using both long- and short-read whole-genome sequencing.

19 rganoids, followed by delayed subcloning and whole-genome sequencing.

20 eight drugs, confirmatory Wayne's assay, and whole-genome sequencing.

21 in mutDNA using Tagged-Amplicon- and shallow Whole Genome- Sequencing.

22 By combining very deep whole genome sequencing ( 1000-fold genome-wide coverage

23 Whole genome sequencing a collection of the first MRSA i

24 data analysis from targeted, whole-exome, or whole-genome sequencing a wellspring to identify new SNP

25 Comparative whole-genome sequencing analysis of emm32.2 iGAS and non

26 Whole-genome sequencing analysis of lung adenocarcinomas

27 extend the use of mutation accumulation and whole-genome sequencing analysis to define DNA repair me

28 Evolved strains can be analyzed by whole genome sequencing and an array of omics technologi

29 diagnostic samples were characterized using whole genome sequencing and combined with epidemiologica

30 We also did whole genome sequencing and core genome multilocus seque

31 To achieve this, we conducted whole genome sequencing and lung function tests in 19 Ar

32 Whole genome sequencing and quantitative real-time polym

33 combination of resistant mutant generation, whole genome sequencing and recombineering to identify t

34 Whole genome sequencing and transcriptome profiling, in

35 ene expression as a quantitative trait using whole genome-sequencing and transcriptome analysis allow

36 antiviral RNAi in Arabidopsis thaliana Using whole-genome sequencing and a computational pipeline, we

37 Whole-genome sequencing and a genome-wide association st

38 Whole-genome sequencing and additional PCR testing demon

39 in Brassicaceae and pave the way for future whole-genome sequencing and assembly efforts in this as

40 s with the blaOXA-232 gene were subjected to whole-genome sequencing and chromosome single-nucleotide

41 With whole-genome sequencing and differential proteomics, we

42 ypic diversity and characterize clones using whole-genome sequencing and doubling time measurements.

43 We subjected these strains to whole-genome sequencing and evolutionary convergence ana

44 mprised 95 primary PDAC cases that underwent whole-genome sequencing and expression microarray on bul

45 In this study, we used whole-genome sequencing and gene expression profiling of

46 cal immunology, as well as new approaches of whole-genome sequencing and genes newly reported to be a

47 e genomic approach includes a combination of whole-genome sequencing and genome-wide microarray techn

48 In this study, whole-genome sequencing and high-resolution (13)C-metabo

49 allele for rs74315329 were identified using whole-genome sequencing and imputation data (based on 10

50 Whole-genome sequencing and induced pluripotent stem cel

51 We performed whole-genome sequencing and phylogenetic analysis of 108

52 We used whole-genome sequencing and phylogenetic analysis to inv

53 We tested this hypothesis using whole-genome sequencing and transcriptomic data, and we

54 ncluding molecular tests and next-generation whole-genome sequencing, and their potential for clinica

55 tro for 4 years, with 279 clones sampled for whole genome sequencing at different time points.

56 icient way, with the single goal of enabling whole-genome sequencing at scale.

57 ain insights into its genetics, we performed whole-genome sequencing at very deep coverage of tumor-c

58 Using a whole genome sequencing-based approach, we developed two

59 imputing from denser reference panels, until whole-genome sequencing becomes feasible in large sample

60 Whole-genome sequencing can be applied across geographic

61 Whole-genome sequencing can measure of the heterogeneity

62 al xenografts and spheroids by high-coverage whole-genome sequencing, clustering of genetic aberratio

63 Whole genome sequencing, conducted on two unaffected par

64 Whole genome sequencing confirmed the ocular vOka strain

65 Whole-genome sequencing confirmed that the isolates were

66 as re-isolated and its identity confirmed by whole genome sequencing, confirming Koch's third and fou

67 d software tool for assembling plasmids from whole genome sequencing data and benchmark its performan

68 In the tests with whole genome sequencing data from 1000 Genomes Project,

69 We analyzed whole genome sequencing data from 680 cases of TCGA inva

70 STRScan was tested on the whole genome sequencing data from Venter genome sequenci

71 Here, we analyse whole genome sequencing data of 769 individuals from 250

72 or several RNA-Seq data sets, as well as the whole genome sequencing data that was used in the constr

73 Whole genome sequencing data were analyzed for rare pLoF

74 With the availability of massive whole genome sequencing data, it becomes practical to mi

75 PennCNV original algorithm for array data in whole genome sequencing data, we processed mapping (BAM)

76 ntegrating downstream analysis functions for whole genome sequencing data.

77 ve associations impacted by batch effects in whole genome sequencing data.

78 ls to identify and mitigate batch effects in whole genome sequencing data.

79 We present deep whole-genome sequencing data ( approximately 38x) from 2

80 Here using a large whole-genome sequencing data bank, cancer registry and c

81 Using whole-genome sequencing data from 163 vervets sampled fr

82 We used whole-genome sequencing data from 2,619 individuals thro

83 We have applied BeviMed to whole-genome sequencing data from 6,586 individuals with

84 reads - on simulated sequencing data and 10X whole-genome sequencing data from the NA12878 human geno

85 This study compares whole-genome sequencing data obtained from chemo-naive a

86 The analysis of human whole-genome sequencing data presents significant comput

87 However, whole-genome sequencing data revealed at least five inde

88 Here, we harnessed whole-genome sequencing data to estimate the mutation ra

89 es tumor content in cfDNA from 0.1x coverage whole-genome sequencing data without prior knowledge of

90 increasingly available genotyping tools and whole-genome sequencing data, and argue for a better int

91 tationally fast, enabling the application to whole-genome sequencing data, and straightforward to imp

92 Through the analysis of whole-genome sequencing data, our findings shed new ligh

93 mbining high-coverage exome and low-coverage whole-genome sequencing data, utilizing information from

94 and on hundreds of thousands of samples with whole-genome sequencing data.

95 germline structural variation breakpoints in whole-genome sequencing data.

96 and ten other statistics are applied to the whole genome sequencing dataset from the TwinsUK study.

97 tifies causative variants in whole exome and whole genome sequencing datasets and provides a powerful

98 Lep-MAP3, capable of mapping high-throughput whole genome sequencing datasets.

99 ell suited for large, possible low-coverage, whole genome sequencing datasets.

100 r and prioritize variants in whole exome and whole genome sequencing datasets.

101 antage of Pacific Bioscience long-reads from whole-genome sequencing datasets.

102 ype-based genomic identification, we applied whole-genome sequencing, detailed phenotyping, and stati

103 typing assay based on target enrichment and whole-genome sequencing (eWGS).

104 105X mean physical coverage and linked-read whole-genome sequencing from 10X Genomics, we document s

105 e Near East, and southern Europe, as well as whole-genome sequencing from 19 of them, to show that ma

106 umannii isolates previously characterized by whole-genome sequencing from the CDC-FDA Antibiotic Resi

107 Whole-genome sequencing gives unprecedented power to det

108 generation of resistant mutants followed by whole genome sequencing has often been successful in unc

109 More recently, M. tuberculosis whole-genome sequencing has been used to estimate popula

110 A deluge of whole-genome sequencing has begun to give insights into

111 l tools for copy-number variation calling in whole genome sequencing have been published, the noisy n

112 Whole-exome and whole-genome sequencing have facilitated the large-scale

113 Whole-exome and whole-genome sequencing have identified more than 265 ge

114 Whole genome sequencing identified a highly expressed FG

115 Whole genome sequencing identified a likely pair of bios

116 Whole genome sequencing identified a locus encoding all

117 Whole-genome sequencing identified a homozygous frameshi

118 Whole-genome sequencing identified a premature stop codo

119 Whole-genome sequencing identified common blaNDM-positiv

120 In addition, whole-genome sequencing identified mutations enriched in

121 Whole-genome sequencing identified specific genes associ

122 Whole-exome sequencing and whole-genome sequencing identified the same homozygous S

123 Whole genome sequencing in 98 Hutterites, a founder popu

124 mportance and power of strain validation and whole genome sequencing in this context.

125 the GoT2D and T2D-GENES consortia performed whole-genome sequencing in 2,657 European individuals wi

126 Here, we describe the utility of whole-genome sequencing in defining nosocomial VREfm tra

127 ive South African families and SNP array and whole-genome sequencing in two Norwegian families, we id

128 Low-coverage whole-genome sequencing is an effective strategy for gen

129 Whole-genome sequencing is an increasingly important com

130 Whole-genome sequencing is identifying growing numbers o

131 Population low-coverage whole-genome sequencing is rapidly emerging as a promine

132 Whole-genome sequencing localized bla(KPC-18) to the chr

133 Whole genome sequencing mixes the signals of sampled pop

134 with inherited retinal disease, who have had whole-genome sequencing (n = 605), whole-exome sequencin

135 Whole genome sequencing of 70 type IV GBS and subsequent

136 We performed whole genome sequencing of a 44 year old, male HPVOPC su

137 Whole genome sequencing of CFW-passaged strains showed n

138 de of inhibition of these compounds based on whole genome sequencing of spontaneous resistant mutants

139 Whole genome sequencing of UNG/SMUG1-deficient tumours r

140 We performed whole-genome sequencing of 102 primary PanNETs and defin

141 Using whole-genome sequencing of 11 262 Icelanders, we found 1

142 ally multi-allelic clusters, identified from whole-genome sequencing of 228 DO mice.

143 Phylogenetic analysis based on whole-genome sequencing of 250 isolates revealed two maj

144 To address this issue, we carried out 60x whole-genome sequencing of 26 metastases from four patie

145 irus surveillance in US exhibition swine and whole-genome sequencing of 380 isolates, we demonstrate

146 mutations in an additional 182 families, and whole-genome sequencing of 4 of the remaining 242 famili

147 Whole-genome sequencing of all patients allowed exclusio

148 We used comparative whole-genome sequencing of chemically mutagenized and na

149 er controlled laboratory conditions; and (4) whole-genome sequencing of clinical and environmental is

150 Here, we show whole-genome sequencing of DNA and RNA in 94 Chinese ind

151 We are performing whole-genome sequencing of families with autism spectrum

152 Based on whole-genome sequencing of four parents and 12 offspring

153 Comprehensive assessment of whole-genome sequencing of HIV-1 eradicated cells ruled

154 iable-number-of-tandem-repeat genotyping and whole-genome sequencing of isolates.

155 er with in vitro microbiology approaches and whole-genome sequencing of Methanomicrobium mobile, a ke

156 We used whole-genome sequencing of multiple isogenic chicken DT4

157 We further performed whole-genome sequencing of nosocomial MDRPa strains to e

158 Whole-genome sequencing of pathogens from host samples b

159 In conclusion, whole-genome sequencing of samples obtained following ne

160 SNPs, with SNP calls closely concordant with whole-genome sequencing of selected lines.

161 rtual microfluidics system, and demonstrated whole-genome sequencing of single-cell MDA products with

162 ely to contribute to susceptibility, we used whole-genome sequencing of subjects with clinically extr

163 rtants, vaccine strains, and field isolates, whole-genome sequencing of the M. gallisepticum vaccine

164 Here we used whole-genome sequencing of the proposed serovar 16 refer

165 Whole-genome sequencing of three mangrove species furthe

166 roach for research and diagnostics, although whole-genome sequencing offers several advantages.

167 Here, we performed whole genome sequencing on DNA from two affected individ

168 ycoplasma hominis isolates were subjected to whole-genome sequencing on the Illumina NextSeq platform

169 al isolates previously characterized through whole-genome sequencing or targeted PCR as to the presen

170 Molecular analyses were performed using whole-genome sequencing or whole-exome sequencing.

171 d phenotypic culturing linked to large-scale whole-genome sequencing, phylogenetic analysis and compu

172 Recently, a whole-genome sequencing project was launched on the wild

173 extracting and assembling plasmid data from whole genome sequencing projects.

174 In this study, we optimized whole-genome sequencing protocols for poliovirus isolate

175 Greater access to whole-genome sequencing provides microbiologists with th

176 lenged by screening on admission studies and whole-genome sequencing, providing evidence for an endog

177 Whole-genome-sequencing, pulsed-field gel electrophoresi

178 We filtered whole-genome sequencing results to include only rare var

179 Whole genome sequencing revealed little to no off-target

180 Surprisingly, whole genome sequencing revealed that the coastal region

181 Whole genome sequencing revealed that the strain carried

182 Whole-genome sequencing revealed that all but one of the

183 the outbreak strains from flour samples, and whole-genome sequencing revealed that the isolates from

184 Whole-genome sequencing revealed the deletion of uhpT en

185 olony mutants were subjected to MIC testing, whole-genome sequencing, reverse transcription-quantitat

186 Whole-genome sequencing revised 93% of karyotypes and de

187 y of data types, including exome sequencing, whole-genome sequencing, RNA-seq, ChIP-seq, targeted seq

188 Whole-genome sequencing showed close relationships betwe

189 (PTC), applying a combined linkage-based and whole-genome sequencing strategy and identified an in-fr

190 We performed whole-genome sequencing, structural modelling and cytoge

191 genes from publicly available whole-exome or whole-genome sequencing studies (4167 probands plus 1786

192 of human heart enhancers for use in clinical whole-genome sequencing studies and highlights the impor

193 riants of unknown significance identified in whole-genome sequencing studies.

194 We conducted a whole-genome sequencing study of common, low-frequency a

195 We used a novel HPV whole-genome sequencing technique to evaluate an excepti

196 So, with the increasing popularity of whole genome sequencing, the need has emerged for a fast

197 ychotic illness and herald the importance of whole-genome sequencing to appreciate the overall genomi

198 We used whole-genome sequencing to characterize cholera across t

199 applied molecular genetics, proteomics, and whole-genome sequencing to demonstrate that the MMAR_003

200 he need for prescreening of patients through whole-genome sequencing to ensure safety.

201 We used whole-genome sequencing to investigate intrafamilial spr

202 We used single-cell whole-genome sequencing to perform genome-wide somatic s

203 Here, we used whole-genome sequencing to scan high-altitude Andeans fo

204 We used whole-genome sequencing to show that Tomelo does not car

205 enomic hybridization as well as large-insert whole-genome sequencing to survey multiple classes of ge

206 Whole-genome sequencing uncovered a catastrophic genome

207 Isolates were analysed by next-generation whole-genome sequencing using Illumina and Pacific Biosc

208 Progress in whole-genome sequencing using short-read (e.g., <150 bp)

209 Whole genome sequencing was performed on strains from fi

210 Whole genome sequencing was used to identify single nucl

211 Whole genome sequencing was used to successfully identif

212 Whole-genome sequencing was applied to investigate the g

213 Whole-genome sequencing was performed on all isolates, a

214 Shallow whole-genome sequencing was performed on an Illumina pla

215 Whole-genome sequencing was performed on DNA from patien

216 Whole-genome sequencing was performed on human and fish

217 Whole-genome sequencing was performed on isolates from c

218 Whole-genome sequencing was performed on study isolates

219 Whole-genome sequencing was performed, and using single

220 Here, whole-genome sequencing was used to demonstrate nosocomi

221 Whole-exome sequencing or whole-genome sequencing was used to identify the causati

222 Whole-genome sequencing was used to perform multilocus s

223 With the advent of whole genome sequencing we are in the midst of a paradig

224 Using exome and whole genome sequencing, we identified recurrent mutatio

225 Utilizing whole-genome sequencing, we characterized the population

226 genotyping and dense imputation mapping from whole-genome sequencing, we tested almost nine million g

227 Spoligotyping and whole-genome sequencing were performed to ascertain homo

228 l-time polymerase chain reaction (qPCR), and whole-genome sequencing were performed.

229 However, compared to whole genome sequencing, WES introduces more biases and

230 Deep whole genome sequencing (WGS) allows for the comprehensi

231 Whole exome sequencing and whole genome sequencing (WGS) are entering clinical use,

232 Whole genome sequencing (WGS) can refine our understandi

233 Whole genome sequencing (WGS) confirmed that the A. gamb

234 netic and phylodynamic analyses to bacterial whole genome sequencing (WGS) data have become essential

235 eezing to store human stool samples prior to whole genome sequencing (WGS) for microbiome studies.

236 Whole genome sequencing (WGS) is a promising strategy to

237 ong with other forms of genetic variation in whole genome sequencing (WGS) projects involving populat

238 Microbial whole genome sequencing (WGS) provides a potential solut

239 olates (LHL and LGL) were subjected to three whole genome sequencing (WGS) runs with different device

240 We further performed a whole genome sequencing (WGS) scan for Alzherimer's dise

241 To obtain a more complete view, whole genome sequencing (WGS) was analyzed in a large co

242 Whole genome sequencing (WGS) was performed to produce a

243 Whole genome sequencing (WGS) was performed to produce a

244 ty using agar dilution, and characterised by whole genome sequencing (WGS).

245 e-wide Analysis of Palindrome Formation) and whole genome sequencing (WGS).

246 Whole-genome sequencing (WGS) allows for a comprehensive

247 ciated with these outbreaks were analyzed by whole-genome sequencing (WGS) analysis.

248 We applied a hybrid whole-genome sequencing (WGS) and deep imputation approa

249 Cohort-wide very low-depth whole-genome sequencing (WGS) can comprehensively captur

250 Whole-genome sequencing (WGS) can generate antibiotic su

251 Whole-genome sequencing (WGS) can help by providing comp

252 Whole-genome sequencing (WGS) can provide excellent reso

253 ocomial cases, we aimed to determine whether whole-genome sequencing (WGS) could be used to support o

254 Whole-genome sequencing (WGS) could offer significant ad

255 Whole-genome sequencing (WGS) data are being generated a

256 Whole-genome sequencing (WGS) data enable the improvemen

257 Using simulations and whole-genome sequencing (WGS) data from multiple differe

258 le X syndrome, is challenging for short-read whole-genome sequencing (WGS) data.

259 The application of whole-genome sequencing (WGS) has become routine for tra

260 Whole-genome sequencing (WGS) has the potential to accel

261 Whole-genome sequencing (WGS) has typically been used to

262 Whole-genome sequencing (WGS) identified a homozygous de

263 We performed whole-genome sequencing (WGS) in 197 individuals with un

264 n-based Estonian Biobank using high-coverage whole-genome sequencing (WGS) in 2,284 samples and SNP g

265 Whole-genome sequencing (WGS) in asymptomatic adults mig

266 Whole-genome sequencing (WGS) is a newer alternative for

267 Whole-genome sequencing (WGS) is an emerging and powerfu

268 Whole-genome sequencing (WGS) makes it possible to deter

269 million sequence variants identified through whole-genome sequencing (WGS) of 15,220 Icelanders for a

270 We performed whole-genome sequencing (WGS) of 208 genomes from 53 fam

271 We undertook whole-genome sequencing (WGS) of 495 E. faecium bloodstr

272 port approximately 9.5 million variants from whole-genome sequencing (WGS) of a Cretan-isolated popul

273 Whole-genome sequencing (WGS) of clinical bacterial isol

274 We used whole-genome sequencing (WGS) of consecutive C. difficil

275 serotyping, multilocus sequence typing, and whole-genome sequencing (WGS) of selected strains, we st

276 cy collaboration began performing real-time, whole-genome sequencing (WGS) on all US Lm isolates from

277 e performed whole-exome sequencing (WES) and whole-genome sequencing (WGS) on AVM tissue from affecte

278 Whole-exome sequencing (WES) and whole-genome sequencing (WGS) simulations were used to c

279 A viral whole-genome sequencing (WGS) strategy, based on PCR amp

280 This study used whole-genome sequencing (WGS) to determine strain relate

281 ureus bloodstream infections (BSIs) and used whole-genome sequencing (WGS) to identify factors associ

282 me PCR for serotyping S. flexneri and to use whole-genome sequencing (WGS) to investigate the phenoty

283 otransposon capture sequencing (mRC-seq) and whole-genome sequencing (WGS) to pedigrees of C57BL/6J a

284 The organism-specific bioinformatics whole-genome sequencing (WGS) typing pipelines at Public

285 Whole-genome sequencing (WGS) was performed for each iso

286 ng chromosomal microarray analysis (CMA) and whole-genome sequencing (WGS), but these approaches suff

287 ive NPCs, with 15 cases subjected to further whole-genome sequencing (WGS), to determine its mutation

288 robiology laboratories underwent culture and whole-genome sequencing (WGS), using WGS to identify tox

289 e using pulsed-field gel electrophoresis and whole-genome sequencing (WGS).

290 tection, and outbreak investigation by using whole-genome sequencing (WGS).

291 ducted antifungal susceptibility testing and whole-genome sequencing (WGS).

292 nsertion/deletion (indel) variants from deep whole-genome sequencing (WGS).

293 bset of patients from the Western Cape using whole-genome sequencing (WGS; n=149), a cough aerosol sa

294 hroughput genetic association studies, e.g. (whole-genome) sequencing (WGS) studies, genome-wide asso

295 notyping methods (real-time PCR [rt-PCR] and whole-genome sequencing [WGS]) to identify which approac

296 ements, based on variants identified through whole-genome sequencing, which included 4,657 Icelandic

297 cotton, and a new-generation approach to the whole-genome sequencing, which will lead to the referenc

298 Large sample sets of whole genome sequencing with deep coverage are being gen

299 hIP-seq, targeted sequencing and single-cell whole-genome sequencing, with a minimal requirement for

300 MRSA isolates underwent whole-genome sequencing, with a pairwise single-nucleoti