ライフサイエンスコーパス: AAA domain

1 ty, properties that arise from its conserved AAA domain.

2 may be a general feature of ATP-hydrolyzing AAA domains.

3 ism for long-range communication between the AAA domains.

4 pha/beta and alpha-helical subdomains of the AAA+ domain.

5 NifL-resistant phenotype of mutations in the AAA+ domain.

6 alpha-helix in the C-terminal portion of the AAA+ domain.

7 protein ClpB to provide a model of torsinA's AAA+ domain.

8 pore loop-substrate contacts spans both ClpA AAA+ domains.

9 ity and crosstalk among the motor's multiple AAA+ domains.

10 coiled-coil domain intercalated between the AAA+ domains.

11 s at the top of the cylinder followed by two AAA+ domains.

12 terminal domain, an M-domain, and two tandem AAA(+) domains.

13 The gene product contains an AAA domain, a putative leucine zipper and a phosphorylat

14 ontains an N-terminal domain (NSF-N) and two AAA domains, a catalytic NSF-D1 and a structural NSF-D2.

15 an ATPase that is comprised of a ring of six AAA domains, a large mechanical element (linker) spannin

16 The DctD AAA+ domain activated transcription in vitro, but many o

17 f an N-terminal regulatory domain, a central AAA domain and a C-terminal DNA binding domain.

18 crystal structure of the Drosophila spastin AAA domain and provide a model for the active spastin he

19 Vps4 contains a single AAA domain and undergoes ATP-dependent quaternary struct

20 nits contain calcium-signaling motifs and/or AAA domains and are nearly ubiquitous in species with mo

21 ormational changes that propagate to all six AAA domains and cause a large movement of the "linker,"

22 nucleotide binding or hydrolysis in the four AAA domains and examined the ability of the mutant dynei

23 ct double-stranded DNA through an N-terminal AAA(+) domain and a C-terminal winged-helix domain (WHD)

24 binding proteins (bEBPs) oligomerize through AAA(+) domains and use ATP hydrolysis-driven energy to i

25 r (FisR) with three domains: an R domain, an AAA+ domain and a DNA-binding domain.

26 es in controlling the oligomerization of the AAA+ domain and modulating interactions with sigma54 in

27 nding rearranges a short a-helix in the Orc1 AAA+ domain and the Orc2 WHD, leading to the activation

28 amino acid substitutions cluster within the AAA(+) domain at residues near the ATP-binding pocket.

29 reveals a closure of the motor's ring of six AAA+ domains (ATPases associated with various cellular a

30 The DctD AAA+ domain, but not DctD(Delta(1-142)), formed a stable

31 aromatic-hydrophobic motif within the first AAA domain can engage a substrate throughout the entire

32 ments show that the helicase activity of the AAA+ domain can be stimulated by addition of the isolate

33 The origin dsDNA inside the narrower AAA+ domain channel shows partial melting due to the com

34 Structurally, the Rep proteins share an AAA(+) domain characteristic of superfamily 3 helicases,

35 In dynein, the first four AAA domains contain consensus nucleotide triphosphate-bi

36 ergent optimization toward the ATPase family AAA domain containing 2 (ATAD2) and cat eye syndrome chr

37 Overexpression of ATAD2 (ATPase family, AAA domain containing 2) has been linked to disease seve

38 AAA domain containing 3A (ATAD3A) is an integral mitocho

39 The ATPase family AAA(+) domain containing 2 (ATAD2) protein and its paral

40 ATAD3 (ATPase family AAA-Domain containing protein 3) is a mitochondrial inne

41 ATPase family AAA-domain containing protein 3A (ATAD3A) is a nuclear-e

42 Here, we identify ATPase family AAA-domain containing protein 3A (ATAD3A), a mitochondri

43 receptor trafficking: Thorase (ATPase family AAA domain-containing protein 1), soluble N-ethylmaleimi

44 n-containing proteins, such as ATPase family AAA domain-containing protein 2 (ATAD2), isoform A, have

45 re, three homologues of animal ATPase family AAA domain-containing protein 3 (ATAD3), which is involv

46 The mitochondrial protein ATPase family AAA domain-containing protein 3A (ATAD3A) interacted wit

47 s mutation in ATAD3A, encoding ATPase family AAA domain-containing protein 3A (ATAD3A).

48 Mammalian ATPase family AAA domain-containing protein 5 (ATAD5) and its yeast ho

49 CLPB is a mitochondrial intermembrane space AAA+ domain-containing disaggregase.

50 The AAA domain contains highly conserved motifs, the Walker

51 -terminal domain (N-domain) and the adjacent AAA domain (D1), resulting in a reduced affinity for ADP

52 p97 forms a hexamer composed of two AAA domains (D1 and D2) that form two stacked rings and

53 conserved Arg(359) and Arg(362) in the first AAA domain, D1 and Arg(635) and Arg(638) in the second A

54 , D1 and Arg(635) and Arg(638) in the second AAA domain, D2.

55 otation of more than 90 degrees for the Orc1 AAA+ domain disrupts interactions with catalytic amino a

56 Subsequent ATP hydrolysis in the first AAA domain dissociated Drg1 from Rlp24, liberating both

57 Unlike the residues of the AAA+ domain DNA-binding segments (beta-hairpin and hydro

58 close homologues are unique in employing the AAA+ domain for GTP hydrolysis-dependent activation of D

59 The AAA+ domains form an open ring without interactions betw

60 binding and hydrolysis in each of these four AAA domains has constituted an important and unresolved

61 We find that the AAA(+) domain has an unpredicted role in controlling the

62 FIGL-1-AAA), in clear contrast to homologous AAA domains, has an unusually high ATPase activity and f

63 results show that the four conserved dynein AAA domains have distinct functions in dynein's mechanoc

64 minal Allosteric Communication Loop with the AAA+ domain helix-2-insert (h2i); and 3) a recessed bind

65 ns unique post-alpha7 insertions within both AAA domains important for Rix7 function.

66 ed for interaction between the ORC1 and CDC6 AAA(+) domains in G1, whereas the same domain prevents C

67 ts include the first analysis of the central AAA+ domain in isolation.

68 represses the ATPase activity of the central AAA+ domain in the absence of nitric oxide.

69 to a cysteine change upstream of the second AAA+ domain in the temperature sensitive TgNoAP1 allele

70 previous characterizations of the cytosolic AAA+ domain in vitro had proved challenging due to its m

71 The order of the AAA+ domains in the ring was determined by using recombi

72 oreover, three phenylalanine residues in the AAA+ domain induce a steric distortion in the DNA.

73 down experiments show that the DnaC and DnaA AAA+ domains interact in a nucleotide-dependent manner.

74 Although canonical inter-AAA+ domain interactions exist between four of the six O

75 minate prematurely, suggesting that the DctD AAA+ domain interfered with transcription elongation.

76 motor unit derives from the assembly of six AAA domains into a hexameric ring.

77 But how the action of its 12 AAA+ domains is co-ordinated to catalyze disaggregation

78 imply that the wave's propagation within the AAA+ domains is not necessarily coupled with a strictly

79 domain, formed by a ring-like arrangement of AAA+ domains, is located approximately 280 A away from t

80 GAF domain restores inhibition by NifL to an AAA+ domain mutation, E356K, in response to fixed nitrog

81 In the absence of an AAA+ domain mutation, the F119S mutation confers hyperse

82 e 216 falls in the N-terminal portion of the AAA+ domain near the sensor 1 motif.

83 Inhibitor binding into the second AAA domain of Drg1 requires ATP loading and results in i

84 ATP hydrolysis in the second AAA domain of Drg1 was required to release shuttling pro

85 n experiments also showed that the catalytic AAA domain of FtsH contains a chaperone-like activity, h

86 nd mammals, Hsm3 actually directly binds the AAA domain of Rpt2.

87 Here, we show that the AAA domain of the Caenorhabditis elegans FIGL-1 protein

88 ort the cryo-EM reconstruction of the tandem AAA domains of Rix7 which form an asymmetric stacked hom

89 f P-loop function within the first and third AAA domains of the Drosophila cytoplasmic dynein heavy c

90 support current models in which the multiple AAA domains of the dynein heavy chain interact to suppor

91 The N-terminal AAA(+) domain of ChlD is essential for complex formation

92 ce of MgADP, and we show that the N-terminal AAA(+) domain of ChlD mediates this process, in agreemen

93 Using a series of mutants in the AAA(+) domain of ChlD, we show that this site is essenti

94 x high resolution structures (<2.1 A) of the AAA(+) domain of EBP phage shock protein F (PspF) includ

95 nit dynamics and nucleotide occupancy of the AAA(+) domain of one well-studied bEBP in complex with i

96 describe the first structure of the central AAA(+) domain of the flagellar regulatory protein FlrC (

97 and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator.

98 inimal functional C-terminal boundary of the AAA+ domain of DctD as being located between Gly-381 and

99 report that Soj directly interacts with the AAA+ domain of DnaA and specifically regulates DnaA heli

100 s involved in nucleotide binding, and of the AAA+ domain of DnaC.

101 topoisomerase IV (Topo IV) by the C-terminal AAA+ domain of FtsK.

102 idence for a DNA-interacting activity in the AAA+ domain of PspF was obtained, suggesting that PspF m

103 The AAA+ domain of Sinorhizobium meliloti C4-dicarboxylic ac

104 In bacteria, the AAA+ domain of the initiator DnaA has been proposed to a

105 howing that the ADP.AlF(x) bound form of the AAA+ domain of the transcriptional activator protein Psp

106 vely removes the hydrophobic domain from the AAA+ domain of TorsinA, which retains catalytic activity

107 rotease requires collaboration among the six AAA+ domains of ClpX.

108 nges in rotation between the large and small AAA+ domains of individual subunits.

109 to NifL are located in both the GAF and the AAA+ domains of NifA.

110 associated with various cellular activities (AAA+) domain of the Escherichia coli activator protein,

111 This enzyme contains two AAA(+) domains, one active in the ChlI protein and one i

112 g., Clp, Deg, FtsH, Lon, 26S proteasome) use AAA+ domains or AAA+ proteins to unfold protein substrat

113 Structures of the sigma(54) activator PspF AAA+ domain (PspF(1-275)) bound to sigma(54) show two lo

114 The PspF AAA(+) domain, PspF(1-275), remodels the bacterial sigma

115 Conserved regions of PspF's AAA(+) domain respond distinctively to nucleotide bindin

116 ween two helical pentamers of ATP-associated AAA+ domains, sharply bending the duplex into a 180 degr

117 l ATPase associated with various activities (AAA) domain, specifically alpha-helices 7 and 9, as rele

118 Through proposed fitting of representative AAA domain structures, we show that the nucleotide catal

119 locus include CbbO and CbbQ, a member of the AAA+ domain superfamily.

120 -1-AAA are not conserved in other homologous AAA domains that have relatively low ATPase activities.

121 share two domains: a modified version of the AAA(+) domain that characterizes the SF3 family of helic

122 NorR by characterizing substitutions in the AAA+ domain that bypass repression by the regulatory dom

123 a large conformational change in the entire AAA+ domain that leads the HD to form both heptamer and

124 ATP-dependent serine protease composed of an AAA+ domain that mechanically unfolds substrates and a s

125 These proteins have conserved AAA+ domains that catalyse ATP hydrolysis to drive confo

126 built upon interactions between neighbouring AAA+ domains, that in vitro stretches DNA to promote rep

127 ows that CsoCbbQ is a hexamer of the typical AAA+ domain; the additional C-terminal domain, diagnosti

128 interaction surface to prevent access of the AAA+ domain to the sigma factor.

129 a continuous surface that allows successive AAA+ domains to bind and extend single-stranded DNA segm

130 built upon interactions between neighbouring AAA+ domains to form an active initiation complex.

131 Our results demonstrate that the free AAA(+) domain undergoes significant changes in oligomeri

132 A region of ClpC containing an AAA domain was necessary and sufficient for polar locali

133 In addition, the DctD AAA+ domain was more homogeneous than DctD(Delta(1-142))

134 The DctD AAA+ domain was significantly more soluble than DctD(Del

135 the GAF domain regulates the activity of the AAA+ domain, we screened for second-site mutations that

136 of site-specifically modified, cross-linked AAA+ domains, we found that the conserved arginine pair

137 Histidine-tagged versions of the DctD AAA+ domain were purified and characterized.

138 al DNA contacts are made with the N-terminal AAA+ domain, which inserts into the minor groove at a ch

139 ynein motor domain consists of a ring of six AAA domains with a protruding microtubule-binding stalk

140 These proteins contain AAA+ domains with two canonical motifs (Walker A and B)