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1 g sensitivity and specificity values using a Bayesian method.
2 d error due to inconsistency assessed with a Bayesian method.
3 subjects but there were no failures with the Bayesian method.
4 tionary processes using a recently developed Bayesian method.
5 PV type infections were estimated using semi-Bayesian methods.
6 ncluding parsimony, distance, likelihood and Bayesian methods.
7 cess of these sequences were performed using Bayesian methods.
8 dy provides a clinically relevant example of Bayesian methods.
9 y describe the relationships among different Bayesian methods.
10 m implausibly high can be moderated by using Bayesian methods.
11 letidae basal") based both on likelihood and Bayesian methods.
12  state-space models using both classical and Bayesian methods.
13 erivation of trees by maximum-likelihood and Bayesian methods.
14 ad and neck cancer-were instead monitored by Bayesian methods.
15 eath or disabling stroke at 24 months, using Bayesian methods.
16 rom age-stratified seroprevalence data using Bayesian methods.
17 fficiency compared with the state-of-the-art Bayesian methods.
18 gnostic testing accuracy was performed using Bayesian methods.
19 ters is conducted through both classical and Bayesian methods.
20 was established using maximum likelihood and Bayesian methods.
21 ta analysis and population projections using Bayesian methods.
22 dence estimators, Cox regression models, and Bayesian methods.
23 ex sample survey data using design-weighted, Bayesian methods.
24 corrected for temporal sampling biases using Bayesian methods.
25 urable polymer everolimus-eluting stent with Bayesian methods.
26  were performed using maximum likelihood and Bayesian methods.
27 e reconstructed using maximum likelihood and Bayesian methods.
28 throughput biological data through empirical Bayesian methods.
29 eatment comparison (MTC) was performed using Bayesian methods.
30 ve number (R0) of clusters were estimated by Bayesian methods.
31 l connections between maximum likelihood and Bayesian methods.
32 als for all reported effect sizes, none used Bayesian methods, 1 used false-discovery rates, 3 used s
33 nalyse tide gauge observations using spatial Bayesian methods(13) to show that, contrary to current t
34                    We develop an agent-based Bayesian method and apply it to Australia's largest erad
35                                 We present a Bayesian method and associated software to infer how man
36   Here, the basis of differences between the Bayesian method and the classical or frequentist approac
37 tate-level policies from 1970 to 2016, using Bayesian methods and a modeling approach that addresses
38 view recently developed and still developing Bayesian methods and associated computer software for ma
39 nce of edge strengths can be evaluated using Bayesian methods and bootstrapping.
40                                        Using Bayesian methods and by estimating the basic reproductio
41 l to a multicentre clinical PDMC trial using Bayesian methods and modelled the potential impact of PD
42                    We combine non-parametric Bayesian methods and probabilistic programming to infer
43 ssigned in a response-adaptive manner, using Bayesian methods and stratified by age group (<18 years,
44                                  Then, using Bayesian methods and well-supported fossil calibration c
45                We mapped HIV prevalence with Bayesian methods, and characterised variability across a
46 larval tick burden datasets via hierarchical Bayesian methods, and use it to explore the relative con
47 12, 2p16.3, 16p13.1 and 16p11.2 with a novel Bayesian method applied to pooled data from published ca
48  to large number of false positives, whereas Bayesian methods are computationally very expensive.
49                                              Bayesian methods are developed to identify fluorophore p
50                                Classical and Bayesian methods are presented.
51                                              Bayesian methods are routinely used to combine experimen
52 These examples demonstrate that hierarchical Bayesian methods are well suited to these data.
53 g ancestral sequences and concludes that the Bayesian method, as implemented by MRBAYES 3.11, is pref
54                      We develop an empirical Bayesian method based on the beta-binomial distribution
55                               We developed a Bayesian method, based on allelic frequency, to estimate
56                                Recently, the Bayesian method becomes more popular for analyzing high
57 e advantages of each data type, we develop a Bayesian method (bMIND) to integrate bulk and scRNA-seq
58                                            A Bayesian method (BPEC) was used to detect four geographi
59                                          The Bayesian method builds on a hierarchical model that acco
60 that FastHiC not only speeds up our original Bayesian method by more than five times, bus also achiev
61 provide an accessible tutorial on the use of Bayesian methods by focusing on example applications tha
62                               We introduce a Bayesian method called SUBSTRA that uses regularized bic
63                                Additionally, Bayesian methods can be computationally expensive, posin
64  use of existing data is appropriate and how Bayesian methods can be implemented more routinely as an
65               A neural network trained using Bayesian methods can correctly predict about 75% of the
66                                              Bayesian methods can jointly infer the number of QTL, th
67 approaches, including maximum likelihood and Bayesian methods, cannot scale to the size of the datase
68 oduce EPIC-unmix, a novel two-step empirical Bayesian method combining reference single-cell/single-n
69 eotide datasets using maximum likelihood and Bayesian methods, comprising all 13 mitogenomes currentl
70 ene divergence time estimates obtained using Bayesian methods confirm an early origin of Stratum 1 ge
71                                    Our fully Bayesian method couples the iHMM to a continuous control
72 lements-or even alternatives-to conventional Bayesian methods, delivering effective uncertainty quant
73 tion events, and phylogenetic analysis using Bayesian methods, demonstrated that new KIR were usually
74 hose inferred by commonly-used parsimony and Bayesian methods demonstrates that statistical tests of
75                                      The new Bayesian methods described here and other related method
76 n sensitivity in a threshold fashion, with a Bayesian method-estimated threshold (325 mg) (beta=0.060
77 ics, non-parametric approaches and empirical Bayesian methods etc.
78      In real applications, the nonparametric Bayesian method fitted transcriptomic imputation models
79 sed on posterior predictive checks (PPCs), a Bayesian method for assessing the quality of fit of a st
80                     LDpred2 is a widely used Bayesian method for building polygenic scores (PGSs).
81 stence of this transform is used to derive a Bayesian method for converting noisy measurements of sub
82                                            A Bayesian method for determining if there are large depar
83            In this paper, we present a fully Bayesian method for directly comparing models of confide
84                               We introduce a Bayesian method for estimating parameters for a model of
85   We then illustrate the advantages of a new Bayesian method for estimating period, which outperforms
86 tic model of the rearrangement process and a Bayesian method for estimating posterior probabilities f
87 ating origination and extinction rates and a Bayesian method for estimating sampling-corrected divers
88                                 We present a Bayesian method for extracting this information from exp
89 monstrate how a recently developed empirical Bayesian method for HMMs can be extended to enable a mor
90            We develop SparScape, a penalized Bayesian method for identifying DBFs active in the consi
91                    We present a hierarchical Bayesian method for identifying genetic interactions thr
92  variable selection methodology to develop a Bayesian method for identifying multiple quantitative tr
93          In this study, we developed BISC, a Bayesian method for inferring bursting parameters from s
94                                 We present a Bayesian method for inferring the phylogenetic relations
95       Specifically, I use the distance-based Bayesian method for inferring the single most likely anc
96 sian entry time realignment), a hierarchical Bayesian method for investigating the long-term natural
97                                 We present a Bayesian method for linking markers to censored survival
98                                            A Bayesian method for mapping linked quantitative trait lo
99              We describe a fast hierarchical Bayesian method for mapping quantitative trait loci by h
100                          First, we present a Bayesian method for model selection that accounts for re
101                      This article presents a Bayesian method for model-based clustering of gene expre
102                            Here we present a Bayesian method for multiple-tissue experiments focusing
103      In this article, the authors describe a Bayesian method for obtaining adjusted results from a di
104                                 We propose a bayesian method for probabilistic population projections
105                                      A fully Bayesian method for quantitative genetic analysis of dat
106             To quantify this, we developed a Bayesian method for reconstructing natural images from t
107                           We propose a fully Bayesian method for reverse engineering a gene interacti
108                                 We propose a Bayesian method for the problem of multiple hypothesis t
109 ultiple linked genetic markers was used in a Bayesian method for the statistical mapping of quantitat
110                                 We present a Bayesian method for the unsupervised integrative modelli
111                                          Few Bayesian methods for analyzing high-dimensional sparse s
112                  Some general likelihood and Bayesian methods for analyzing single nucleotide polymor
113 accuracy and power of maximum likelihood and Bayesian methods for detecting site-specific positive Da
114 ated the performances of three BLUP and five Bayesian methods for genomic prediction by using nine ac
115                       The authors describe 4 Bayesian methods for imputing the missing data based on
116 pare and contrast three previously published Bayesian methods for inferring haplotypes from genotype
117                    However, state-of-the-art Bayesian methods for inferring timetrees are computation
118                                    We derive Bayesian methods for selecting the best locus order base
119                                   We develop Bayesian methods for SRB estimation for all countries fr
120 frequentist approaches and survey the use of Bayesian methods for the design and analysis of clinical
121 mation algorithms as well as frequentist and Bayesian methods for uncertainty analysis have been impl
122 ods: The response function is inferred using Bayesian methods from the observed trajectories of bacte
123                Using simulated datasets, the Bayesian method generally fares better than the ML appro
124                 Eyes progressing only by the Bayesian method had faster rates of change than those pr
125 n empirical salmon dataset revealed that our Bayesian method had the highest ratio of correct to inco
126                                          Our Bayesian method harmonized measured and in silico estima
127                                          The Bayesian method has been used to construct a PGRN based
128                 It is little understood that Bayesian methods have a data-based core, which can be us
129                            To date, however, Bayesian methods have been largely restricted to the Var
130                                              Bayesian methods have been shown to provide accurate tra
131                                 Hierarchical Bayesian methods have been used in previous papers to es
132                                              Bayesian methods have proven successful in building comp
133 requentist statistics remain predominant and Bayesian methods have recently experienced a resurgence
134                                              Bayesian methods have seen an increase in popularity in
135                                          The bayesian method identified a significantly higher propor
136                             In addition, the bayesian method identified a significantly higher propor
137                                            A Bayesian method identified the largest p-value threshold
138 , the multiplicative method outperformed the Bayesian method if actual tap water consumption rates we
139  the QTL parameters is obtained by using the Bayesian method implemented by Markov chain Monte Carlo
140                           Here, we present a Bayesian method implemented in the program BORICE (Bayes
141 s study, we investigate the application of a Bayesian method implemented via the Markov chain Monte C
142  both parametric PrediXcan and nonparametric Bayesian methods in a convenient software tool "TIGAR" (
143 easingly accessible, enabling growing use of Bayesian methods in a range of disciplines, including me
144              Here, we highlight the value of Bayesian methods in drug development, discuss barriers t
145       Our results demonstrate the utility of Bayesian methods in genetic epidemiology and provide sup
146                    It differs from classical Bayesian methods in which a classification model is assu
147                                Specifically, Bayesian methods incorporating rate variation significan
148 talytic models were fitted to the data using Bayesian methods, incorporating uncertainty in diagnosti
149                 We here propose GeneCodeq, a Bayesian method inspired by coding theory for adjusting
150                                 We present a Bayesian method, integrated assembly of phenotype-specif
151  celebrated power analysis, we show that the Bayesian method is comparable to the frequentist one and
152                            The nonparametric Bayesian method is flexible and general because it inclu
153        The generality and flexibility of the Bayesian method is illustrated when a Lorenz curve is to
154 simulated data, we show that the variational Bayesian method is more accurate in finding the true num
155 m three different diseases, we show that the Bayesian method is more robust to outliers, creates more
156 array datasets and show that the variational Bayesian method is more sensitive to capturing biologica
157                           First, a recursive Bayesian method is presented for probabilistically chara
158     The reanalysis of completed trials using Bayesian methods is becoming increasingly common, partic
159         We propose using a simulation-based, Bayesian method known as Approximate Bayesian Computatio
160 mparative benchmarking with Bayesian and non-Bayesian methods (LSD, TreeTime, and treedater), we foun
161 s jointly with genomic breeding values using Bayesian methods may prevent that decline.
162 teraction term explicitly, our nonparametric Bayesian method measures the importance of each QTL, irr
163                                 We propose a Bayesian method: mixture-model-based rare-variant analys
164                                 We present a Bayesian method of base calling, BM-BC, for Solexa-GA se
165                        Here we present a new Bayesian method of counting steps in photobleaching time
166 veral other methods, including the empirical Bayesian method of Efron et al. and the Significance Ana
167                          Here, we describe a Bayesian method of inferring the positions of the tagged
168 A abundance for 3,143 of these genes using a Bayesian method of statistical analysis.
169 ations within species and are well suited to Bayesian methods of assigning unknown individuals to pop
170 pares parsimony, maximum likelihood, and the Bayesian methods of inferring ancestral sequences and co
171 s were analyzed using maximum likelihood and Bayesian methods of phylogenetic inference.
172 ogeographic analysis was performed through a Bayesian method on 103 Italian and 208 foreign meningoco
173                                          The Bayesian method outperformed the multiplicative method i
174        Comparative analysis reveals that the Bayesian method outperforms cutting-edge alternatives, d
175                    The outperformance of our Bayesian method over the traditional single-marker analy
176 al life analysis, it has been concluded that Bayesian methods performed better as compared to maximum
177                                Additionally, Bayesian methods performed better for the highly heritab
178             We demonstrate that our proposed Bayesian method performs favourably against existing fre
179                 Using maximum-likelihood and Bayesian methods, phylogenetic trees based on the full-l
180  propose a latent-temporal progression-based Bayesian method, PROB, for inferring GRNs from the cross
181                  Statistical inference using Bayesian methods produces a distribution of effect sizes
182                                          The Bayesian method proposed by Barry and Hartigan is well s
183                                              Bayesian methods provide a framework for synthesizing da
184                                              Bayesian methods provide an alternative, probabilistic i
185                                              Bayesian methods provide natural modeling frameworks for
186                                              Bayesian methods provide such an alternative, and our ap
187 verage of 70% compared to a state-of-the-art Bayesian method (PRS-CSx) in the African ancestry popula
188 n the BC for PRS construction and (ii) a new Bayesian method (PRS-PGx-Bayesx) to reduce Eurocentric o
189                    We have developed a novel Bayesian method, PurBayes, to estimate tumor purity and
190                 Notably, we observe that our Bayesian method reduces uncertainty by up to 60% compare
191 f relevant existing data that could be used, Bayesian methods remain underused in the clinical develo
192 n of individual slopes of MD change with the Bayesian method resulted in better prediction of future
193                           Here, we present a Bayesian method SCAPE, which enables de novo identificat
194                In addition, we show that the Bayesian method serves as an alternative or even better
195 he competing models were small, although the Bayesian methods showed a modest improvement over other
196 and S segments, using maximum-likelihood and Bayesian methods, showed that NVAV was most closely rela
197 netic analyses, using maximum-likelihood and Bayesian methods, showed that RKPV shared a most recent
198 etic analysis of the DNA (COI) barcodes with Bayesian methods shows that this "species" is a long-sta
199 umans as the primary bacterial vector, and a Bayesian method significantly matched individuals to the
200                                   Two of the Bayesian methods (STRUCTURE and BAPS) and phylogenetic r
201                                              Bayesian methods support the current guidelines, which w
202                            We describe a new Bayesian method, termed SigNet for significance networks
203  are shrunk by the same factor, we develop a Bayesian method that allows the shrinkage factor to vary
204                          BAli-Phy, a popular Bayesian method that co-estimates multiple sequence alig
205 he interactions in PIPs were calculated by a Bayesian method that combines information from expressio
206 ture review-derived, study data-based, and a Bayesian method that combines prior knowledge with study
207 k Estimation across Unequal Sample sizes), a Bayesian method that enables joint learning of multiple
208 come these difficulties, we have developed a Bayesian method that estimates the empirical pattern of
209 in the presence of allelic heterogeneity), a Bayesian method that integrates genetic association data
210  To address this problem, we report JACKS, a Bayesian method that jointly analyzes screens performed
211 ical Systems Inference Engine 2 (MDSINE2), a Bayesian method that learns compact and interpretable ec
212  Therefore, we present BLEND, a hierarchical Bayesian method that leverages multiple single-cell refe
213             Here, we propose a nonparametric Bayesian method that reconstructs the clonal populations
214 o improve on this, we employ a nonparametric Bayesian method that was originally proposed for genetic
215 genetic analyses using maximum parsimony and Bayesian methods that address the origin and diversifica
216                                    Among the Bayesian methods, the Bayesian ridge regression and Baye
217                    We introduce an empirical bayesian method to accurately characterize the molecular
218           Here, we propose and demonstrate a Bayesian method to build statistical libraries of magnet
219                                 We propose a Bayesian method to call indels from short-read sequence
220                                    We used a Bayesian method to compare the outcomes of 67 acute myel
221                      We developed a rigorous Bayesian method to detect CNVs in the genes, based on re
222             We introduce here a hierarchical Bayesian method to detect local adaptation that can deal
223                           DecontX is a novel Bayesian method to estimate and remove contamination in
224  Markov chain Monte Carlo (MCMC) implemented Bayesian method to estimate both the main and the intera
225  binary time series, we used a nonparametric Bayesian method to estimate pairwise directional correla
226                           We propose a novel Bayesian method to estimate such population prevalence t
227  To resolve this discrepancy, we developed a Bayesian method to estimate the ages of angiosperm famil
228       Here I apply an extremely conservative Bayesian method to estimate the number of recent amphibi
229 ameters through a maximum a posteriori (MAP) Bayesian method to facilitate the method development pro
230                           We present a novel Bayesian method to find SNPs associated with non-Gaussia
231 leobiology Database (paleobiodb.org) using a Bayesian method to identify significant change points in
232                                 We propose a Bayesian method to include probe-level measurement error
233                     Here, we propose a fully Bayesian method to infer ensembles of chromatin structur
234                             We propose a new Bayesian method to infer population structures using mul
235                                 We propose a Bayesian method to infer the perturbation time given tim
236 ostic Factor Impact Calculator, which uses a Bayesian method to make adjustments based on relative ri
237              Here we present a nonparametric Bayesian method to map multiple quantitative trait loci
238                                 We present a Bayesian method to model the association between an HPO-
239 ble approximate expected loglikelihood-based Bayesian method to perform network inference given this
240 se a hidden Markov random field (HMRF) based Bayesian method to rigorously model interaction probabil
241               In this study, we used a novel Bayesian method to screen mRNAs and estimate the effects
242 ers have been identified, data are fit using Bayesian methods to a population-TK model to estimate ke
243                                   Here using Bayesian methods to analyse both studies, we find that L
244 using phylogeny-based maximum likelihood and Bayesian methods to detect Darwinian selection on the ch
245 to screen birds for infections and then used Bayesian methods to determine phylogenetic relationships
246 tree contained in the PAML software provides Bayesian methods to estimate divergence times of genomic
247                                      We used Bayesian methods to estimate the posterior probability d
248 ose of this study is to use updated data and Bayesian methods to evaluate the effectiveness of hypero
249                           Using hierarchical Bayesian methods to fit computational reinforcement lear
250                                First, we use Bayesian methods to incorporate assumptions about the ba
251 by analyzing ~20,000 fossil occurrences with Bayesian methods to infer dispersal and diversification
252 transmission-dynamic model, calibrated using Bayesian methods to local surveillance data to understan
253                                     We apply Bayesian methods to multi-valent seroprevalence data for
254 e estimate and analyze our joint model using Bayesian methods to obtain uncertainties and distributio
255 re all two- and three- strain systems, using Bayesian methods to perform model selection, and identif
256  of coalescent, maximum likelihood (ML), and Bayesian methods to population genetic data combined wit
257 ledge of total community sizes and then used Bayesian methods to produce unbiased estimates with quan
258                  We then employ hierarchical Bayesian methods to recover the underlying "hyperdistrib
259 f maximum-likelihood, maximum-parsimony, and Bayesian methods to the resulting data sets, P. penetran
260 pproaches for uncertainty quantification use Bayesian methods to weight ESMs based on a balance of hi
261 e uncertainty, were fitted to the data using Bayesian methods, to estimate rates of antibody (Ab)-ser
262 ecision proxy climate data, analyzed through Bayesian methods, to provide evidence for a rapid climat
263      The analysis has been carried out using Bayesian methods under different loss functions and info
264      Starting with an informative prior, our Bayesian method updates a posterior over the perceptual
265                                            A Bayesian method using prior knowledge for control subjec
266                                          The Bayesian method was compared with the conventional ordin
267          A significant contribution from the Bayesian method was realizing that the variability of th
268                              A nonparametric Bayesian method was used to construct growth velocity tr
269                                          The Bayesian method was used to perform a network meta-analy
270                                          The Bayesian method was validated and found to perform bette
271                                        Using Bayesian methods we infer parameters for each model from
272               Namely, using metainference, a Bayesian method, we reconstruct an ensemble of structure
273                                     With the Bayesian method, we were able to handle situations in wh
274 ing a vetted fossil dataset and cutting-edge Bayesian methods, we analyzed the dynamics of South Amer
275                                        Using Bayesian methods, we compared outcomes in patients who h
276                                        Using Bayesian methods, we examined how pretreatment levels of
277 variate analyses, clustering algorithms, and Bayesian methods, we found evidence for moderately low r
278                        Using frequentist and Bayesian methods, we found that autistic adults performe
279  Taking advantage of the merits of empirical Bayesian methods, we have developed EBSeq for identifyin
280                     Using direct overlap and Bayesian methods, we identified new potential target gen
281 r mixed model and the accurate prediction of Bayesian methods, we propose a machine learning-based me
282 imates of sensitivity and specificity of the bayesian method were compared with those obtained by the
283                                              Bayesian methods were used to define the posterior proba
284 genetic analyses, Statistical Parsimony, and Bayesian methods were used to infer genetic diversity, g
285   Maximum likelihood, maximum parsimony, and Bayesian methods were used to infer phylogenies from the
286 TS: In this comparative effectiveness study, bayesian methods were used to model panel data of annual
287                                              Bayesian methods were used to test for mediation.
288                    We developed a nowcasting Bayesian method which incorporates time-varying delays (
289 sample validation suggests that the proposed Bayesian method, which incorporates physics-guidance, ha
290 ovel hidden Markov random field (HMRF) based Bayesian method, which through explicitly modeling the n
291                                              Bayesian methods, which improve the prediction accuracy
292   These adjustments were implemented through Bayesian methods, which incorporated all available infor
293 [Formula: see text] is based on a sequential Bayesian method, while the parameter [Formula: see text]
294 lmnet is an R package implementing empirical Bayesian method with both lasso (EBlasso) and elastic ne
295 s each individual to a population by using a Bayesian method with multiple tuning parameters.
296 hort-range LD information well, we recommend Bayesian methods with t-distributed priors.
297                                        These Bayesian methods (with the aid of Markov chain Monte Car
298            A biexponential analysis with the Bayesian method yielded true diffusion coefficient (D),
299 the DNA+morphology data set by parsimony and Bayesian methods yielded a single well supported family-
300 nary search (REBS), and a procedure the uses Bayesian methods (zippy estimation of sequential testing

 
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