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1 clease) and DNA repair enzymes (e.g., uracil-DNA glycosylase).
2 but instead depends, in part, on the thymine DNA glycosylase.
3 ranslational modification of the human MutYH DNA glycosylase.
4 effects were observed previously for thymine DNA glycosylase.
5 osphate and from genomic DNA by 8-oxoguanine-DNA glycosylase.
6 sed in a coupled assay in principle with any DNA glycosylase.
7 ue to inactivation of MUTYH, which encodes a DNA glycosylase.
8 utase (MnSOD) and mitochondrial 8-oxoguanine DNA glycosylase.
9 ) base interrogation during lesion search by DNA glycosylases.
10 tic promiscuity, such as these two unrelated DNA glycosylases.
11 ine (G) are substrates for repair by various DNA glycosylases.
12 rent catalytic mechanism from those of other DNA glycosylases.
13 ich are repair intermediates of bifunctional DNA glycosylases.
14 of DNA sliding is human 8-oxoguanine ((o)G) DNA glycosylase 1 (hOGG1), which repairs mutagenic (o)G
15 ing the DNA glycosylase gene 3-MethylAdenine DNA Glycosylase 1 (MAG1), which is part of the base-exci
16 ere recently shown to stimulate 8-oxoguanine DNA glycosylase 1 (OGG1), an enzyme that removes oxidize
17 enzymes, the DNA glycosylases TDG and 8-oxoG DNA glycosylase 1 (OGG1), apurinic/apyrimidinic (AP) end
22 of DNA damage repair molecules 8-oxoguanine-DNA-glycosylase-1, nei-endonuclease-VIII-like, X-ray-rep
23 , we report that the suppression of Nei-like DNA glycosylase 2 (NEIL2), a mammalian DNA glycosylase t
24 n be selectively killed by inhibiting uracil DNA glycosylase 2 (UNG) and that this synthetic lethal p
25 erase 3alpha (TOP3alpha) and NEIL3 (Nei-like DNA glycosylase 3), as well as transcription and RNA reg
27 We examined the role of the viral uracil DNA glycosylase, a protein conserved among all herpesvir
31 oxyribosyl moiety of DNA, human alkyladenine DNA glycosylase (AAG) and Escherichia coli 3-methyladeni
33 ision repair (BER) initiated by alkyladenine DNA glycosylase (AAG) is essential for removal of aberra
38 ng RONS-induced DNA damage; the alkyladenine DNA glycosylase (Aag/Mpg) excises several DNA base lesio
39 ve DNA demethylation mediated by the DEMETER DNA glycosylase accounts for all of the demethylation in
40 G/I, T/I, and A/I base pairs and a xanthine DNA glycosylase acting on all double-stranded and single
41 and A/U base pairs, but also a hypoxanthine DNA glycosylase acting on G/I, T/I, and A/I base pairs a
42 through the female lineage due to widespread DNA glycosylase activity in the male germline, and exten
45 f NEIL1 are catalytically inactive for their DNA glycosylase activity, these deficiencies may increas
48 or quantitative measurements of 8-oxoguanine DNA glycosylase, alkyl-adenine DNA glycosylase, MutY DNA
49 tion of intercalation for human alkyladenine DNA glycosylase, an enzyme that initiates repair of alky
50 d by AID/APOBEC enzymes, here we used uracil-DNA glycosylase and an alkoxyamine to covalently tag and
51 pyAXII) and demonstrated their DNA cleavage, DNA glycosylase and AP lyase activities in vitro at 37 d
52 ed as Zf-GRF repeat) are dispensable for its DNA glycosylase and AP lyase activity; however, the pote
53 the VACV D4 protein serves both as a uracil-DNA glycosylase and as an essential component required f
54 poson-based library construction with uracil DNA glycosylase and endonuclease VIII to specifically de
55 product of 5hmC could be excised by thymine DNA glycosylase and MBD4 glycosylases regardless of cont
57 n to interact with the 8-oxoguanine (8-oxoG) DNA glycosylase and stimulate its enzymatic activities.
58 terstrand cross-link repair pathways via its DNA glycosylase and/or AP lyase activity, which are cons
59 amages in opposing DNA strands with selected DNA glycosylases and human apurinic/apyrimidinic endonuc
60 Base excision repair (BER) is initiated by DNA glycosylases and is crucial in repairing RONS-induce
61 correlated with active DNA demethylation by DNA glycosylases and repressive targeting by the Polycom
62 vity of several enzymes [four BER-initiating DNA glycosylases and the downstream processing apurinic/
63 was paralleled by a compromised TDG (thymine DNA glycosylase) and TET1 (ten-eleven translocation prot
65 d 5-HmdU, may be cleaved from DNA by thymine DNA glycosylase, and subsequent action of base-excision
71 Previous fluorescence methods for assaying DNA glycosylases are often complex and/or limited in sco
72 e in HD model R6/2 mice indicates that these DNA glycosylases are present in brain areas affected by
73 OS1/DEMETER family of 5-methylcytosine (5mC) DNA glycosylases are the first genetically characterized
75 oxidized bases, initiated by NEIL1 and other DNA glycosylases at the chromatin level remains unexplor
76 ion of the base excision repair (BER) enzyme DNA glycosylase augments PD-L1 upregulation in response
81 have described both vertebrate and microbial DNA glycosylases capable of unhooking highly toxic inter
86 results suggest that Fpg, and possibly other DNA glycosylases, convert part of the binding energy int
90 lf, the enzyme harbors a helix-hairpin-helix DNA glycosylase domain followed by a unique C-terminal d
92 expanded biological utility are specialized DNA glycosylases - enzymes that selectively excise damag
95 dification sites was developed that utilizes DNA glycosylases found in the base excision repair pathw
97 A glycosylase (UDG) and formamido-pyrimidine-DNA glycosylase (FPG), 3'-5' exonucleases, and enzymes w
98 e, by the repair enzyme, formamidopyrimidine-DNA glycosylase (Fpg), likely involves multiple gates.
99 revealed introduction of formamidopyrimidine-DNA glycosylase (Fpg)-sensitive oxidative DNA lesions su
100 xamined the consequences of compromising the DNA glycosylases (Fpg and MutY) and endonucleases (Smx a
104 antitative PCRs (qPCRs) targeting the uracil DNA glycosylase gene (udg) or the 23S rRNA gene are desc
105 volved in DNA repair pathways, including the DNA glycosylase gene 3-MethylAdenine DNA Glycosylase 1 (
106 atory circuit centered on a 5-methylcytosine DNA glycosylase gene is required for long-term epigeneti
107 hat targeted inactivation of the mouse Smug1 DNA glycosylase gene is sufficient to ablate nearly all
108 combined with inactivation of the Ung uracil-DNA glycosylase gene leads to a loss of nearly all detec
111 These results reveal how the human oxoG DNA glycosylase hOGG1 locates the lesions inside the DNA
112 the structure of a human 8-oxoguanine (oxoG) DNA glycosylase, hOGG1, in which a normal guanine from D
114 stal structures of human 8-oxoguanine (oxoG) DNA glycosylase, hOGG1, that interact with the DNA conta
116 equence, all three analogs can be cleaved by DNA glycosylases; however, glycosylase activity is block
117 leobase excision activities of human thymine DNA glycosylase (hTDG) toward duplex DNA substrates harb
118 ssay to study damage search by human thymine DNA glycosylase (hTDG), which initiates BER of mutagenic
119 DNA repair enzymes such as human uracil-DNA glycosylase (hUNG) perform the initial step in the b
121 kbone in sliding and hopping by human uracil DNA glycosylase (hUNG), which is an exemplar that effici
122 ell line that had no detectable human uracil DNA glycosylase (hUNG2) activity, establishing that hUNG
123 ed the probability that nuclear human uracil DNA glycosylase (hUNG2) excised two uracil lesions space
124 abasic site recognition, the rate of uracil-DNA glycosylase hydrolysis of the N-glycosidic bond, con
125 responses, whereas a lack of other Nei-like DNA glycosylases (i.e., NEIL1 and NEIL2) had no signific
126 e (AAG) and Escherichia coli 3-methyladenine DNA glycosylase II (AlkA) bind tightly to their abasic D
128 domain (MBD) family, MBD4 serves as a potent DNA glycosylase in DNA mismatch repair specifically targ
130 onal analysis of gene expression profiles of DNA glycosylases in gastric specimens linked the reduced
131 dues are removed from DNA by specific uracil-DNA glycosylases in the base excision repair pathway.
132 breaks caused by base excision from ssDNA by DNA glycosylases, including Nei-like (NEIL) 1, would gen
136 DNA methyltransferases and 5-methylcytosine DNA glycosylases interact to maintain epigenetic homeost
137 ndonuclease VIII-like protein 1 (NEIL1) is a DNA glycosylase involved in initiating the base excision
139 The bacterial MutY (MUTYH in humans) adenine DNA glycosylase is able to initiate the repair of A:oxoG
142 fluenced by either UNG1/2, SMUG1, or thymine-DNA glycosylase knockdown, strongly suggesting that ther
148 ults demonstrate that rice DNG701 is a 5-meC DNA glycosylase/lyase responsible for the demethylation
150 cing 1 (ROS1) is a multi-domain bifunctional DNA glycosylase/lyase, which excises 5-methylcytosine (5
151 l of eukaryotic and prokaryotic bifunctional DNA glycosylases/lyases (NEIL1, Nei, Fpg, Nth, and NTH1)
154 along with the base excision repair pathway DNA glycosylase MAG1 renders the tpa1Deltamag1Delta doub
159 Here we present the first, to our knowledge, DNA glycosylase mechanism that does not require base fli
161 ue to inefficient turnover of N-methylpurine-DNA glycosylase (MPG), which initiates BER of epsilonA.
162 Mitochondria-targeted human 8-oxoguanine DNA glycosylase (mt-hOgg1) and aconitase-2 (Aco-2) each
166 8-oxoguanine DNA glycosylase, alkyl-adenine DNA glycosylase, MutY DNA glycosylase, uracil DNA glycos
167 ditional (fifth) viral gene, encoding uracil-DNA glycosylase (MVADelta5-HIV); or (iii) represent the
168 w the presence of the oxidized base-specific DNA glycosylase Nei-like 2 (NEIL2) and the DNA end-proce
169 we demonstrated that the bacterial and human DNA glycosylases Nei and NEIL1 excise unhooked psoralen-
171 t the DNA base excision repair (BER) enzyme, DNA glycosylase NEIL1, efficiently recognizes and excise
173 e base excision activities of five mammalian DNA glycosylases (NEIL1, NEIL2, mNeil3, NTH1, and OGG1)
174 we observed that the endonuclease VIII-like DNA glycosylase, NEIL1, accumulates at sites of oxidativ
175 that elevated expression of the bifunctional DNA glycosylase, NEIL2, sensitizes breast cancer cells t
178 ases in naked DNA, products generated by the DNA glycosylase NTHL1 were efficiently processed by the
179 se lesions in the human genome, initiated by DNA glycosylases, occurs via the base excision repair pa
180 nes, which are recognized and cleaved by two DNA glycosylases of the base excision repair pathway, en
182 odulating the DNA repair enzyme 8-oxoguanine DNA glycosylase (OGG1) in the PyMT transgenic mouse mode
186 BER and relies on the upstream 8-oxoguanine-DNA glycosylase (OGG1) to recognise and excise 8-oxoG.
187 g base excision repair (BER) by 8-oxoguanine DNA glycosylase (OGG1), yielding an abasic site (AP).
191 e sugar-phosphate backbone and the action of DNA glycosylases on deaminated, oxidized, and alkylated
198 n of SMUG1 or thymine-DNA glycosylase uracil-DNA glycosylases, proving that it is base excision by UN
199 y contribute to removal of uracils by uracil DNA glycosylase regardless of the translational or rotat
200 he immunoprecipitate of human NEIL1, a major DNA glycosylase responsible for oxidized base repair.
203 ed in flowering or DNA repair, including the DNA glycosylase ROS1, which facilitates DNA demethylatio
204 tructures have captured for the first time a DNA glycosylase scanning the genome for a damaged base i
206 ision repair, a pathway that is catalyzed by DNA glycosylases such as 8-oxoguanine DNA glycosylase (O
208 of DNA polymerase B (polB) and methyladenine DNA glycosylase (tag) genes responsible for the repair o
210 d dinucleotide and purified BER enzymes, the DNA glycosylases TDG and 8-oxoG DNA glycosylase 1 (OGG1)
211 o regenerate unmodified cytosines by thymine-DNA glycosylase (TDG) and base excision repair (BER) pat
212 that the base excision repair enzyme thymine DNA glycosylase (TDG) could be such a target for its dua
216 h 5fC and 5caC subject to removal by thymine DNA glycosylase (TDG) in conjunction with base excision
217 ispair, and this step is followed by thymine DNA glycosylase (TDG) initiated base excision repair (BE
222 nactivation of the DNA repair enzyme thymine DNA glycosylase (TDG) leads to embryonic lethality in mi
224 n (TET) enzymes (TET1/TET2/TET3) and thymine DNA glycosylase (TDG) play crucial roles in early embryo
227 ship between chromatin structure and thymine DNA glycosylase (TDG) using chemically defined nucleosom
228 sine (caC), excision of fC or caC by thymine DNA glycosylase (TDG), and restoration of cytosine via f
229 sine (caC), excision of fC or caC by thymine DNA glycosylase (TDG), and subsequent base excision repa
230 electively recognized and excised by thymine DNA glycosylase (TDG), leading to DNA demethylation.
231 are recognized by the monofunctional thymine DNA glycosylase (Tdg), which cleaves the glycosidic bond
234 by replication-dependent dilution or thymine DNA glycosylase (TDG)-dependent base excision repair.
235 sine through iterative oxidation and thymine DNA glycosylase (TDG)-mediated base excision repair.
241 ied as a function of (i) the lesion type and DNA glycosylase tested, (ii) local sequence context and
243 hachiroi AlkZ (previously Orf1), a bacterial DNA glycosylase that protects its host by excising ICLs
246 -like DNA glycosylase 2 (NEIL2), a mammalian DNA glycosylase that specifically removes oxidized bases
249 )-like protein 1], one of the five mammalian DNA glycosylases that excise oxidized DNA base lesions i
250 uble-stranded (ds)DNA scanning enzymes, e.g. DNA glycosylases that excise rare aberrant bases, there
252 e monophosphate, or that lack MutM and MutY, DNA glycosylases that process base pairs involving 8-oxo
253 xcision repair (BER), a process initiated by DNA glycosylases that recognize and remove damaged DNA b
255 ducts of this or any type are not excised by DNA glycosylases that use a traditional base-flipping me
257 is critically dependent upon the ability of DNA glycosylases to locate rare sites of damage embedded
258 ILENCING 1 (ROS1) family of 5-methylcytosine DNA glycosylases to protect these genes from silencing.
260 rable interest surrounds the question of how DNA glycosylases translocate efficiently along DNA while
261 ylation in plants is mediated by a family of DNA glycosylases typified by Arabidopsis ROS1 (repressor
262 ioned 2'-deoxyuridine (dU) residue by uracil DNA glycosylase (UDG) and apurinic/apyrimidinic endonucl
263 eotide kinase, the DNA repair enzymes uracil-DNA glycosylase (UDG) and formamido-pyrimidine-DNA glyco
269 pair enzymes, in particular by MutM and MutY DNA glycosylases, ultimately contributes to cell death.
270 d cytidine deaminase are processed by uracil-DNA glycosylase (UNG) and mismatch repair (MMR) pathways
271 ion repair (BER), either initiated by uracil-DNA glycosylase (UNG) or by single-strand selective mono
272 the Ig gene loci can be recognized by uracil DNA glycosylase (UNG) or mutS homologs 2 and 6 (MSH2-MSH
273 plementary pathways, initiated by the uracil-DNA glycosylase (UNG) or the mismatch repair factor MSH2
278 l-guanine mismatches are processed by uracil DNA glycosylase (UNG)-mediated base-excision repair and
284 ions with base excision repair enzyme uracil DNA glycosylase (UNG2) and crossover junction endonuclea
287 to the recruitment of another target, uracil DNA glycosylase (UNG2), to the CRL4-DCAF1 E3 by Vpr.
289 1/2 but not by knockdown of SMUG1 or thymine-DNA glycosylase uracil-DNA glycosylases, proving that it
290 osylase, alkyl-adenine DNA glycosylase, MutY DNA glycosylase, uracil DNA glycosylase, and APE1 activi
291 e findings support a general mechanism where DNA glycosylases use highly dynamic multidimensional dif
292 hat are commonly employed for studying other DNA glycosylases, we observe an unusual biphasic protein
294 Repair of A:oxoG is initiated by adenine DNA glycosylase, which catalyzes hydrolytic cleavage of
295 w that cells defective in the N-methylpurine DNA glycosylase, which fail to remove N-methylpurines fr
296 fferent DNA repair pathways, including NEIL1 DNA glycosylase, which initiates base excision repair (B
297 ity arising from DNA damage are mitigated by DNA glycosylases, which initiate the base excision repai
298 e specific sites in nucleic acids, including DNA glycosylases, which remove modified nucleobases to i
299 coli endonuclease III (Endo III or Nth) is a DNA glycosylase with a broad substrate specificity for o
300 two model enzymes, exonuclease I and uracil DNA glycosylase with high sensitivity and selectivity.