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1 E. coli and Salmonella are two of the most common bacter
2 E. coli cells expressing FliC(N87K) sensed ascending a c
3 E. coli DeltaL YA constitutively co-expressing alpha-L-f
4 E. coli RNA polymerase initiates transcription more effi
7 the ejection of a representative set of 122 E. coli proteins we find a greater than 1000-fold variat
8 temporally and clinically diverse set of 907 E. coli isolates, including 722 uropathogenic E. coli (U
10 d the highest antimicrobial activity against E. coli, S. aureus, and S. typhi in in vitro antimicrobi
11 ocapsules had antimicrobial activity against E. coli, which could be extended to develop active packa
12 X) for fishing out specific aptamers against E. coli Shiga toxin subtypes viz., stx1 & stx2 via epito
13 istance capacity of K. michiganensis against E. coli, supporting the idea that nutrient competition i
15 e fab genes of FA synthesis thereby allowing E. coli to have its cake (acyl chains for phospholipid s
17 es of tRNA(fMet) from the genome afforded an E. coli strain in which the efficiency of non-canonical
19 ) , oppA3(Ct) ) along with oppBCDF(Ct) in an E. coli mutant lacking the Opp transporter and determine
20 eroaggregative Escherichia coli (EAEC) is an E. coli pathotype associated with diarrhea and growth fa
23 (Gfp)-tagged AR plasmid (pRP4-gfp) within an E. coli host (EcoFJ1) in the liquid phase and biofilms i
24 s on downstream genes in EAEC strain 042 and E. coli K-12 strain DH5alpha, which lacks the AggR regul
25 quently contaminated with E. coli (69%), and E. coli levels were the highest during the wet season.
33 t exhibited effectiveness against S. aureus, E. coli, and S. typhimurium, with minimum inhibitory con
35 essed by tracking of particles and bacteria (E. coli and E. cloacae) with developmental age and expos
38 applied the Stabilized Peptide Evolution by E. coli Display technique to develop disrupters of the t
40 at the discrimination between RNA ligands by E. coli ProQ and Hfq depends both on positive determinan
42 el constrained by a large set of single-cell E. coli flagellar synthesis data from different strains
43 6.8 mum, three bacteria strains (B. cereus, E. coli, and S. enterica) and a yeast cell (S. cerevisia
44 We also found that 12.8% of broiler chicken E. coli isolates and 7.61% of layer chicken isolates car
45 On the other hand, 51.09% of layer chicken E. coli isolates were MDR, with 3, 4 or 5 ARGs detected
46 the antibody against a panel of 86 clinical E. coli ST131 O25:H4 isolates revealed 4 binding phenoty
47 Results were interpreted according to CLSI E. coli breakpoints, with 49.0 to 85.8% considered susce
49 ctivation of Gram-negative Escherichia coli (E. coli) and Gram-positive Enterococcus durans (E. duran
50 bition zone method against Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus), which de
51 ment platform comprised of Escherichia coli (E. coli) and transgenic zebrafish embryos, we are able t
53 , sensitive and label-free Escherichia coli (E. coli) detection utilizing interferometric reflectance
55 ed 711 proteoforms from an Escherichia coli (E. coli) proteome consuming only nanograms of proteins.
58 teps of rRNA processing in Escherichia coli (E. coli) were described several decades ago, the enzymes
59 n (DIP) Human, Drosophila, Escherichia coli (E. coli), and Caenorhabditis elegans (C. elegan) dataset
66 control protease naturally absent in common E. coli expression strains, drastically reshapes the mut
67 en the two constructs suggest a more compact E. coli MscL at the membrane inner-leaflet, as a consequ
69 bolA potentiated carbapenem efficacy in CRE E. coli, whereas inhibition of the genes flhC and ygaC c
70 ut was nearly eliminated in a ClpB-deficient E. coli strain, which demonstrates a significant selecti
72 ence of mcr-1 gene among genetically diverse E. coli populations from broiler chickens in Bangladesh
73 PCR profiles and WGS analysis showed diverse E. coli population carrying multiple antimicrobial resis
79 on with exogenous hydrogen peroxide enhanced E. coli growth through AppBCX-mediated respiration in a
82 i-Mg-3wt% Zn) that can selectively eradicate E. coli while not harming the survival rate, development
84 roducibility and detection of potential ESBL E. coli from poultry cecal (n = 30) and water (n = 30) s
86 ely detecting and quantifying potential ESBL E. coli MacConkey agar from eight manufacturers, represe
89 nes encoding aggregative adherence fimbriae, E. coli common pilus, flagellin and EAEC heat-stable ent
90 suppressed growth and colonisation by focal E. coli but also prevented it from evolving antibiotic r
91 mples from all three human donors, our focal E. coli strain only evolved antibiotic resistance in the
94 nsing, we have developed an immunosensor for E. coli detection by modifying low cost commercial micro
99 of L-Asn by the type II L-asparaginase from E. coli (EcAII), but that work was limited to just one e
101 d oxidation-induced abasic sites in DNA from E. coli treated with a sublethal dose of hydrogen peroxi
103 died how frameshift-inducing stem-loops from E. coli dnaX mRNA and the gag-pol transcript of Human Im
104 e report the crystal structure of MlaFB from E. coli, the cytoplasmic portion of the larger MlaFEDB A
105 ous bacteria could obtain these vectors from E. coli through several mechanisms of horizontal gene tr
107 city depends on the presence of a functional E. coli trxA allele and T7 RNA polymerase-driven express
113 lycan fragments (tri-diaminopimelic acid) in E. coli and in C. trachomatis These findings suggest tha
115 ulations and a synthetic biology approach in E. coli, we find that the TF gene and its target genes h
118 tage of transcripts that are Np(4)-capped in E. coli, clear evidence for Np(4) cap acquisition by Np(
119 trated that 2,7-anhydro-Neu5Ac catabolism in E. coli depended on YjhC and on the predicted sialic aci
120 rphogen-induced mutual inhibition circuit in E. coli populations and show that mutual inhibition alon
121 evelopment of high-accumulating compounds in E. coli, and a general blueprint for the conversion of G
125 olog from Hemophilus influenzae expressed in E. coli cells also reversibly binds a [2Fe-2S] cluster t
127 nents followed by heterologous expression in E. coli and spectroscopic analysis of the purified produ
128 proves multiplex editing by 5- to 10-fold in E. coli, while PapRecT enables efficient recombineering
130 ely removes the [2Fe-2S] cluster from Fur in E. coli cells, suggesting that Fur senses the intracellu
131 yejM was discovered as an essential gene in E. coli and S. typhimurium that plays a critical role in
133 r ppGpp to inosine-guanosine kinase (Gsk) in E. coli modulates the levels of the key metabolite phosp
134 As also conferred the ability to bind Hfq in E. coli cells, as measured using a three-hybrid assay.
136 In contrast, the specific insertions in E. coli and mycobacterial gyrase subunits appear to prev
137 compound that accumulates to a high level in E. coli, is effective against Gram-negative clinical iso
138 Pol IV is expressed at increased levels in E. coli cells exposed to exogenous DNA damaging agents,
139 larger model of central carbon metabolism in E. coli, and compared each framework's ability to recapi
140 introduction of the acp3U-47 modification in E. coli tRNAs is promoted by the presence of the m7G-46
142 get RNAs differing by a single nucleotide in E. coli and resolve single epitranscriptomic marks in vi
144 tood, because MK and DMK are also present in E. coli Here, we established that UQ(9) is the major qui
145 laccase from T. thermophilus was produced in E. coli, and the effect of Cu(2+) on its electroactivity
147 ptive response and repair of S (p)-Me-PTE in E. coli, however, was essential for the generation of th
149 ndent manner has been discovered recently in E. coli Its physiological relevance is not yet understoo
150 tems are known to control acid resistance in E. coli, enabling the bacteria to survive under acidic c
151 does not confer antimicrobial resistance in E. coli, highlighting the importance of verifying protei
152 udy defines an antifolate stress response in E. coli and links its associated metabolites to a major
153 aCl by KGlu, the primary cytoplasmic salt in E. coli, results in a decrease of the diffusion coeffici
154 ntally for many different nutrient shifts in E. coli, as well as for other respiro-fermentative micro
156 initial adaptive response to N starvation in E. coli These results serve as a paradigm to demonstrate
158 the effectiveness of antibiotic treatment in E. coli-induced myositis and a clinically relevant S. au
162 000+ intact proteoforms from 5 mug of intact E. coli cell lysate in 10 online-collected fractions.
164 lian cell-expressed receptor compared to its E. coli-expressed counterpart, due to contributions from
167 ively characterize gene repression in living E. coli by a collection of individual TALED loops with s
168 ggested that mutations removing the CTT make E. coli less susceptible to sodium azide at subinhibitor
171 trated that adenosine or ATPgammaS mitigates E. coli-induced ALI in mice and may be useful as an adju
172 Conversely, in a vaginal colonization model, E. coli are detected inside vaginal cells and the urinar
173 dissociation of a natural protein nanocage, E. coli bacterioferritin (Bfr), using synchrotron radiat
175 d ground beef can also contain nonadulterant E. coli strains, regular PCR cannot confirm whether the
178 4 mug/ml cefotaxime, where 45% and 16.6% of E. coli isolates phenotypically expressed ESBL productio
179 re, we systematically explore the ability of E. coli to harness underground metabolism to compensate
183 oteins that bind to the secondary channel of E. coli RNA polymerase (RNAP), such as GreA, GreB or Dks
184 id not contain any major chemoattractants of E. coli, in contradiction to some previous reports, whic
185 identification and quantitative detection of E. coli are of great importance for bovine mastitis cont
186 throughput approach for the determination of E. coli endotoxin after only 60 s, with a limit of detec
187 In DH5alpha, aar affected expression of E. coli genes in some cases via H-NS and in some cases i
188 has also been shown to affect expression of E. coli housekeeping genes, including H-NS, a global reg
189 ecently characterised a low-activity form of E. coli transketolase, TK(low), which also binds the cof
195 mase) DeltadapF (epimerase) double mutant of E. coli rescues the d-glutamate auxotrophic defect.
196 e re-examined the experimental parameters of E. coli in-cell NMR and found that the detectability and
198 ds, food, and objects as primary pathways of E. coli ingestion and emphasize the value of intervening
199 by children and the predominant pathways of E. coli ingestion were unchanged by the water, sanitatio
200 re we show that an assay in the periplasm of E. coli linking aggregation directly to antibiotic resis
203 en-starved bacteria as a biological probe of E. coli cell function during nitrogen starvation, we dem
204 filtrating CD45(+) cells in the prostates of E. coli- or phosphate-buffered saline-treated mice.
210 le microbial community with three strains of E. coli that cyclically interact through (i) the inhibit
214 Here we present nine cryo-EM structures of E. coli ATP synthase to 3.1-3.4 angstrom resolution, in
216 mice demonstrated baseline translocation of E. coli into the liver and spleen and were more suscepti
217 -a nutrient that supports the growth of only E. coli-to bi-colonized gnotobiotic mice abolished the c
218 as compared to control in both germ-free or E. coli gut microbiota states was used to quantitate pat
222 he ETT2 locus in strains of human pathogenic E. coli, we carried out genomic sequencing of 162 isolat
226 ccumulation and capture of motile pathogens (E. coli) within the microtrap structure, while the inter
227 ls, showed increased killing of phagocytosed E. coli and M. smegmatis Polyphosphate inhibited phagoso
228 man intestinal organoids to genotoxic pks(+) E. coli by repeated luminal injection over five months.
229 ay facilitate transmission of mcr-1 positive E. coli to humans and livestock through fecal contaminat
230 ls are readily colonized with mcr-1 positive E. coli, their shedding patterns, transmission among con
234 teep gradients with wide temperature ranges, E. coli aggregated at intermediate temperatures, with ma
235 re gradients with narrow temperature ranges, E. coli tended to aggregate near a sidewall of the gradi
237 udies, the M. tuberculosis Tam also replaced E. coli BioC both in vivo and in vitro and complemented
242 iated with the spread of multidrug-resistant E. coli phenotypes responsible for device- and procedure
243 the three protoxins are acylated in the same E. coli cell background by each of the CyaC, HlyC, and R
244 onize new niches, interrogation of sequenced E. coli O157:H7 genomes showed a high level of CycA cons
245 ce of any redox indicators, allowed a single E. coli cell detection and from 1 to 4 x 10(4) CFU mL(-1
246 ne control strains and (ii) 288 human-source E. coli strains classified by PCR as ExPEC and non-ExPEC
250 ed T3SS but in addition a second T3SS termed E. coli T3SS 2 (ETT2) has been described in a number of
254 stem can be used to detect and associate the E. coli serogroup-specific gene with major virulence gen
256 dge, this is the first report concerning the E. coli secondary bacterial infections following the FMD
258 nerates a multitude of sequence ions for the E. coli ammonia channel (AmtB), provides improved locali
261 Fe-2S] cluster in Fur protein is ~31% in the E. coli iscA/sufA mutant cells and is decreased to ~4% i
265 ore, the detectability and resolution of the E. coli in-cell NMR spectra correlated with the soluble
266 Our ~3.5 angstrom cryo-EM structure of the E. coli MCE protein LetB reveals an ~0.6 megadalton comp
267 he geometric and electronic structure of the E. coli periplasmic molybdenum-dependent methionine sulf
268 d demonstrates remarkable versatility of the E. coli translational machinery for initiation with ncAA
272 ctor pSF-OXB15-p450camfusion showed that the E. coli cells died after five days but a variety of bact
274 ing of the motor was almost identical to the E. coli W3110 strain, which is a derivative of K-12 and
278 TA3, and IRF4) at 18 hours after exposure to E. coli were identified to be differentially regulated b
279 ther goat's mammary gland immune response to E. coli lipopolysaccharide (LPS) could be conditioned by
280 ACSL1 levels were elevated in response to E. coli treatment, and macrophage-expressed ACSL1 was in
287 stingly, we find that in B. subtilis, unlike E. coli where multiple enzymes have a biochemical activi
291 vious studies established that uropathogenic E. coli - the primary cause of urinary tract infections
294 mpound that accumulates intracellularly when E. coli is exposed to high concentrations of extracellul
295 iDe to in vivo metatranscriptomic data where E. coli was present at high abundances, and found that o
296 owledge, this level of sensitivity for whole E. coli detection is unprecedented in label-free biosens
298 er samples were frequently contaminated with E. coli (69%), and E. coli levels were the highest durin
299 noculating petroleum-polluted sediments with E. coli carrying the vector pSF-OXB15-p450camfusion show