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1 FKBP family members are targets for drugs such as rapamy
2 FKBP gene expression coordinately induces the expression
3 FKBP-domain proteins (FKBPs) are pivotal modulators of c
4 t of rapamycin and FK506-binding protein 12 (FKBP), respectively, the optimized FRB-N-terminal lucife
5 ELP nanoparticles, FK506 binding protein 12 (FKBP), which is the cognate protein target of Rapa, was
6 athrin by using an FK506-binding protein 12 (FKBP)-clathrin fusion protein that is specifically oligo
9 e show here that induced dimerization of Abl-FKBP, but not the kinase-defective AblKD-FKBP, inhibits
12 as in its closed state or when applied after FKBP binding had occurred, whereas diamide was always ef
14 e solved the crystal structures of the AIPL1-FKBP domain and its pathogenic mutant V71F, both in the
17 FRAP (FKBP-rapamycin-associated protein), an FKBP-tagged Golgi enzyme can be trapped when it visits t
19 rin-coated vesicles (CCVs), together with an FKBP and rapamycin-binding domain-containing construct w
22 mily immunophilins that contain both CyP and FKBP domains for which we propose the name FCBP (FK506-
24 D, Tmp-SLF, which dimerizes E. coli DHFR and FKBP and has no endogenous mammalian targets that would
26 A combined model of the RyR fragment and FKBP docked into the cryo-EM map suggests that the fragm
27 mycin in samples overexpressing both FRB and FKBP (FRB.rapamycin+FKBP, Kd approximately 100 fM; FKBP.
28 ion of these domains to the proteins FRB and FKBP enabled their induced assembly by the natural produ
30 e different proteins, calmodulin, NmerA, and FKBP, shows that selective labeling with [(13)C]methyl g
31 Evidence for an interaction between RyR and FKBP is well documented, both in skeletal muscle (RyR1-F
32 Rapadocin is a potent, isoform-specific and FKBP-dependent inhibitor of the equilibrative nucleoside
33 owed that controlled homodimerization of APP-FKBP leads to a 50% reduction in total Abeta levels in t
38 hat the chromatin binding ability of 'basic' FKBPs is shared amongst related orthologues present in f
39 n, which induces a tight association between FKBP (FK506-binding protein) and FRAP (FKBP-rapamycin-as
40 apamycin induces a tight association between FKBP and FRAP, one would expect rapamycin to trap the FK
41 The rapamycin-controlled interaction between FKBP and FRB proteins could be detected in vitro and in
43 horough analysis of the interactions between FKBP, rapamycin, and the rapamycin-binding domain of mTO
44 506-binding protein-FKBP-rapamycin-binding- (FKBP-FRB)-rapamycin system have been widely used to prob
46 prevented the formation of BiFC complexes by FKBP and FRB fusions, but did not disrupt existing BiFC
49 both a 50-residue insertion in the catalytic FKBP domain, also called 'Insert-in-Flap' or IF domain,
51 (NLuc)/C-terminal luciferase fragment (CLuc)-FKBP luciferase complementation imaging (LCI) pair recon
52 plants of cells expressing the FRB-NLuc/CLuc-FKBP LCI pair, dose- and time-dependent luciferase activ
53 s validated on two protein-ligand complexes: FKBP complexed to 2-(3'-pyridyl)-benzimidazole and MurA
54 ost, such as Escherichia coli In conclusion, FKBP domains from thermostable SlyD proteins are highly
55 s composed of three domains: two consecutive FKBP domains and a three-unit repeat of the TPR (tetratr
56 ur helices within FRB, we have created cpFRB-FKBP pairs that respond to ligand with varying activatio
58 nants using FRET, we created five single-Cys FKBP variants labeled with Alexa Fluor 488 (denoted D-FK
59 ants labeled with Alexa Fluor 488 (denoted D-FKBP) and then targeted these D-FKBPs to full-length RyR
62 8 (denoted D-FKBP) and then targeted these D-FKBPs to full-length RyR1 constructs containing decahist
64 supporting a novel hypothesis that declining FKBP function plays a major role in unhealthy brain agin
69 osase with ERT2 and two degradation domains (FKBP-DD, DHFR-DD), in multiple orientations, and determi
76 we show that the best potential binders for FKBP proteins optimally expose the two contiguous carbon
77 onyl oxygen in the proline-mimetic chain for FKBP docking and are characterized by the abundance of r
80 istone prolyl isomerase activities, the Fpr4 FKBP domain binds to nucleosomes and nucleosome arrays i
82 tween FKBP (FK506-binding protein) and FRAP (FKBP-rapamycin-associated protein), an FKBP-tagged Golgi
83 on of FKBP (FK-506 binding protein) and FRB (FKBP-rapamycin binding protein) upon UV irradiation.
84 eta produces GSK-3beta fused to a tag, FRB* (FKBP/rapamycin binding), resulting in a rapidly destabil
85 tein-protein interactions can be imaged (FRB-FKBP, Fos-Jun, and neuroligin-PSD-95), with as little as
89 e FKBP12-rapamycin-binding (FRB) domain from FKBP-12-rapamycin associated protein 1 (FRAP1, also know
92 lial cells stably expressing a chimeric HER2-FKBP molecule that could be conditionally induced to hom
96 ficacy is decreased in the presence of human FKBP due to the high concentration of FKBP and its tight
97 ta are available for eight of fourteen human FKBPs covering ten of the twenty-two different FKBP doma
101 mutation, N760D, appears to directly impact FKBP binding through interfering with SPRY1 folding.
102 in the urea-unfolded state that were not in FKBP(*), indicating that the mutations had a more substa
105 tail to tandem repeats of FKBP, and GP Ib-IX(FKBP)(2) and alpha(IIb)beta(3) were expressed in Chinese
107 Conditional oligomerization of GP Ib-IX(FKBP)(2) by AP20187, a cell-permeable FKBP dimerizer, ca
108 ll shear rates of up to 2000 s(-1), GP Ib-IX(FKBP)(2) mediated cell tethering to immobilized VWF, jus
110 eptor-labeled CaM binding near donor-labeled FKBP (FK506-binding protein 12.6) on the cytoplasmic dom
112 ponses via isomerase-independent mechanisms, FKBPs are most highly expressed in the nervous system, w
113 GIC) rapidly cycles through the ER (30 min), FKBP-Golgi enzyme chimeras remain stably associated with
117 ne the pharmacological relevance of multiple FKBP members in the immunosuppressant-induced T-cell ina
120 and by extension to mTOR, in the absence of FKBP is of little consequence under physiological condit
121 these findings, we propose that addition of FKBP-binding groups might partially overcome the poor ph
124 cin derivative induced rapid dimerization of FKBP (FK-506 binding protein) and FRB (FKBP-rapamycin bi
125 d in other systems where the dimerization of FKBP has been used to initiate signaling pathways, offer
126 cation of chemically induced dimerization of FKBP to create nearly instantaneous high-affinity bivale
127 d by the synthetic oligomerization domain of FKBP, which confers conditional transformation propertie
132 e showed that Shld1, the chemical inducer of FKBP-DD, does not interfere with stem cell differentiati
136 at its cytoplasmic tail to tandem repeats of FKBP, and GP Ib-IX(FKBP)(2) and alpha(IIb)beta(3) were e
138 tes of Q53N and Q53T were similar to that of FKBP(*), but Q53D unfolded twice as fast as FKBP(*).
140 s in Arabidopsis is that a large fraction of FKBPs and CYPs are localized in the chloroplast, a possi
143 6- and rapamycin-binding protein (FKBP12, or FKBP) and the FKBP-rapamycin binding (FRB) domain of the
144 ntly in samples overexpressing either FRB or FKBP alone (rapamycin+FKBP, Kd approximately 0.2 nM; rap
145 cient trimerization of split pairs of FRB or FKBP with full-length FKBP or FRB, respectively, by rapa
146 n of DNA sequences encoding FRB+rapamycin or FKBP+rapamycin in samples overexpressing both FRB and FK
150 ugh FKBP51 shares characteristics with other FKBPs, it also has unique features, especially the role
151 ase in both adherence and spreading of PECAM/FKBP-2-transfected cells on immobilized fibronectin, a r
152 Ib-IX(FKBP)(2) by AP20187, a cell-permeable FKBP dimerizer, caused a decrease in cell translocation
153 ncentration of the weaker binding Plasmodium FKBP has no effect on the inhibitory potency of MTXSLF i
155 ovalently linked to a ligand for the protein FKBP to create a bifunctional molecule called MTXSLF.
157 ytes deficient in the FK506-binding protein (FKBP) 12, a target of rapamycin activity, had reduced pr
158 Cas9) in complex with FK506-binding protein (FKBP) and a CEM consisting of FK506 linked to a molecule
159 fusion protein of the FK506 binding protein (FKBP) and caspase 8 under control of the albumin promote
160 osed of the canonical FK506-binding protein (FKBP) and circular permutants of FKBP12-rapamycin bindin
162 y relies on a mutated FK506-binding protein (FKBP) destabilizing domain (dd) fused to the protein of
164 s gammatolerans SlyD FK-506-binding protein (FKBP) domains suitable for presentation of the predefine
167 BP38, a member of the FK506-binding protein (FKBP) family that is structurally related to FKBP12.
168 Mips are part of the FK506-binding protein (FKBP) family, whose members typically exhibit peptidylpr
169 constructed an AblNuk-FK506-binding protein (FKBP) fusion protein to enforce the nuclear accumulation
170 ion of a TRH receptor-FK506-binding protein (FKBP) fusion protein was stimulated by a dimeric FKBP li
171 cule used to dimerize FK506-binding protein (FKBP) fusion proteins and initiate biological signaling
172 incorporated into an FK506 binding protein (FKBP) fusion to allow for its specific activation using
173 erized member of the FK-506-binding protein (FKBP) gene family down-regulated in aggressive tumors.
175 teine variants of the FK506-binding protein (FKBP) labeled with a donor probe, and DPc10 labeled with
176 l-permeable, bivalent FK506-binding protein (FKBP) ligand stimulated clustering when added to cells e
177 e dimerization domain FK506-binding protein (FKBP) or to the hexameric protein CcmK4 from cyanobacter
178 20-2, belongs to the FK-506 binding protein (FKBP) subfamily that functions as peptidyl-prolyl isomer
179 binary complexes with FK506-binding protein (FKBP) through a shared FKBP-binding domain before formin
180 se 9 fused to a human FK506 binding protein (FKBP) to allow conditional dimerization using a small mo
182 thermore, fusion of a FK506-binding protein (FKBP) to the N terminus of human Cdc34 yielded FKBP-Cdc3
183 d by interaction with FK506-binding protein (FKBP), and disruption of the RyR-FKBP association has be
184 es with a fluorescent FK506-binding protein (FKBP), and FRET was determined following incubations in
187 evealed that both the FK506 binding protein (FKBP)-like domain and the tetratricopeptide repeat (TPR)
192 CID tools such as the FK506-binding protein-FKBP-rapamycin-binding- (FKBP-FRB)-rapamycin system have
194 associated with the FK506 binding proteins (FKBP) -52 and -51 response to cortisol exposure in neuro
200 similarity to human FK506-binding proteins (FKBPs) in residues 166 to 252 located in the globular do
203 nophilins, including FK506-binding proteins (FKBPs), are protein chaperones with peptidyl-prolyl isom
208 include calstabins [FK506-binding proteins (FKBPs)], calmodulin (CaM), phosphodiesterase, kinases, p
211 ns in the first LP dipeptide in the putative FKBP binding domain eliminated FKBP12 and FKBP52 interac
214 pressing either FRB or FKBP alone (rapamycin+FKBP, Kd approximately 0.2 nM; rapamcyin+FRB, Kd = 26 mu
215 rexpressing both FRB and FKBP (FRB.rapamycin+FKBP, Kd approximately 100 fM; FKBP.rapamycin+FRB, Kd =
217 colocalizes with endogenous and recombinant FKBP chimeric clathrin polypeptides in PC12-cell endosom
218 ite biology, we adapted a ligand-regulatable FKBP protein destabilization domain (ddFKBP) for use in
219 ere stably transfected with siRNA-resistant, FKBP-tagged subunits of the adaptor protein (AP) complex
220 ng protein (FKBP), and disruption of the RyR-FKBP association has been implicated in cardiomyopathy,
223 K506-binding protein (FKBP) through a shared FKBP-binding domain before forming ternary complexes wit
227 that the protein heterodimerization switches FKBP-rapalog-FRB can be harnessed in engineered COS-7 ce
230 , a protozoan parasite, contained N-terminal FKBP and C-terminal CyP domains joined by tetratricopept
233 D and Q53T mutants also refolded faster than FKBP(*) but lacked the folding intermediate, indicating
236 onally induced to homodimerize by adding the FKBP ligand AP1510, or instead induced to heterodimerize
237 eening a small dipeptide library against the FKBP-FRB protein complex involved in cell cycle arrest.
239 in-binding protein (FKBP12, or FKBP) and the FKBP-rapamycin binding (FRB) domain of the mammalian tar
241 at the HD2-type histone deacetylases and the FKBP-type PPIases may have evolved from a common ancesto
243 inities of two protein-ligand complexes: the FKBP protein bound with small molecules 4-hydroxy-2-buta
244 We have generated docking poses for the FKBP-GPI complex using eight docking programs, and compa
246 eptidyl-prolyl-isomerase (PPI) function, the FKBP protein family is at the crossroad of several impor
247 X compound and the minimal pharmacore in the FKBP family, shedding new light on the isomerization mec
248 m that missense and nonsense variants in the FKBP-like and tetratricopeptide repeat domains of AIPL1
250 domain elements are closely apposed near the FKBP binding site within the RyR1 three-dimensional stru
253 of the FKBP65 gene and other members of the FKBP multigene family were therefore investigated from a
254 ike 1 (AIPL1) is a distinctive member of the FKBP superfamily in terms of its biochemical properties,
256 affinities involved in the formation of the FKBP.rapamycin.FRB complex, we used fluorescence polariz
258 (SAR) of small molecules that mimic only the FKBP binding domain portion of FK506 has focused on este
259 l and pipecolyl esters, which mimic only the FKBP binding domain portion of FK506, are proposed and a
260 ogical inhibitors of the PI 3'-kinase or the FKBP 12-rapamycin-associated protein/mammalian target of
261 rotein (FKBP12, also known as FKBP1A) or the FKBP-rapamycin binding (FRB) domain of the mammalian tar
262 al domains of RyR1, thus suggesting that the FKBP binding site is composed of determinants from both
270 binding of the farnesylated-Cys probe to the FKBP-like domain of AIPL1, thus uncovering a novel funct
271 FRAP, one would expect rapamycin to trap the FKBP-fused Golgi protein in the ER if it ever visits the
272 nsight into its biological role, we used the FKBP degradation domain system to generate a fusion prot
274 so create inducible CASFx (iCASFx) using the FKBP-FRB chemical-inducible dimerization domain, allowin
275 g dimerizes any two proteins tagged with the FKBP and DHFR domains until exposure to light causes its
279 lit-tyrosine phosphatases (PTPs) attached to FKBP and FRB, where catalytic activity can be modulated
283 s split into two moieties that were fused to FKBP (FK506-binding protein) and FRB (rapamycin-binding
284 ments of yellow fluorescent protein fused to FKBP and FRB produced detectable BiFC complex fluorescen
285 nt of the Venus fluorescent protein fused to FKBP produced constitutive BiFC complexes with several C
286 s the Q53N mutant was stabilized relative to FKBP(*) with little change in the equilibrium m values.
289 vestigate the molecular basis of this unique FKBP-dependence, spontaneous plaque-forming mutants of p
293 These receptor heterocomplexes contain wheat FKBPs, and they bind rabbit cytoplasmic dynein in a PPIa
294 CPS was still triggered by rapamycin when FKBP and FRB occupied one or both of the extein position
300 BP) to the N terminus of human Cdc34 yielded FKBP-Cdc34 that was induced to form a dimer upon treatme