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1 GAG is a heterogeneous linear alpha-1,4-linked exopolysa
2 GAG-DMMB and GAG-MS (g/mol creatinine) were increased in
3 GAG-protein interactions participate in neuronal develop
4 GAGs affect the kinetics and pathway of Abeta self-assem
5 GAGs were selectively removed from demineralized mouse p
6 lthough no co-crystal structure of the IL-10.GAG complex could be obtained, its structural characteri
7 articular, experimental evidence about IL-10/GAG binding sites is lacking, despite its importance for
9 n both MSM (r = 0.48, GAG-DMMB and r = 0.43, GAG-MS; P < 0.001) and SM patients (r = 0.47, P = 0.002
10 with parasite biomass in both MSM (r = 0.48, GAG-DMMB and r = 0.43, GAG-MS; P < 0.001) and SM patient
11 of a 7-base pair response element, either 5- GAG CA-3 or 5- GAG CA-3 (where M = 5-methylcytosine).
12 Zta-response elements, including meZRE1 (5- GAG C A-3) and meZRE2 (5- GAG G A-3), where a methylated
13 cluding meZRE1 (5- GAG C A-3) and meZRE2 (5- GAG G A-3), where a methylated cytosine occupies one of
21 such as 1B6 that recognize the more abundant GAG-bound form of the chemokine may not be the optimal s
23 CR2 agonists, the dimer is the high-affinity GAG ligand, lysine and arginine residues located in two
24 given GAG, and structural differences among GAGs and among chemokines impact binding interactions.
25 lastic lamellae, lost SMC contractility, and GAG production within an intra-lamellar space, focusing
33 ally relevant interaction between Sema3A and GAGs, thus revealing SICHI as a new, to our knowledge, c
37 CaMKII phosphorylates the N-lobe of the Arc GAG domain and disrupts an interaction surface essential
38 consistent with close (<5 A) contact between GAG anomeric position(s) and one or more histidine resid
40 que non-chemokine domain, both of which bind GAGs and are critical for GAG-dependent oligomerization
43 minoglycans) using a dimethylmethylene blue (GAG-DMMB) and liquid chromatography-tandem mass spectrom
44 mutant of a residue that is involved in both GAG binding and receptor signaling showed the highest re
48 ical shift perturbations of IL-10 induced by GAG binding were used to narrow down the location of the
50 ulator of chemokines by modulating chemokine/GAG interactions, which may be a major mechanism by whic
53 ite of CS-A and CS-E [4- and 4,6-sulfated CS-GAG (COMP)] matrices compared with monosulfated (4-sulfa
56 specific IgG or IgE in plasma, (d) decreased GAG storage in liver, and (e) fewer circulating immune c
57 Pel polysaccharide biosynthesis, can degrade GAG, disrupt A. fumigatus biofilms, and attenuate fungal
59 s spectrometry on urine samples to determine GAG (heparan sulfate, chondroitin sulfate, and hyaluroni
61 t time, opposing functions for the different GAG modifications on TbetaRIII suggesting that Wnt inter
63 ce GAGs and genetic ablation that diminishes GAG expression reduced CHIKV binding and infectivity of
64 an active glycoside hydrolase that disrupts GAG-dependent A. fumigatus and Pel polysaccharide-depend
67 HCs (P < 0.001), with no differences in DMMB-GAG and MS-GAG between CM and UM children or between tho
68 After adjusting for disease severity, DMMB-GAG was significantly associated with parasitemia [parti
71 Proteomic analysis confirmed that enzymatic GAG removal does not significantly alter protein content
72 The enhanced iron uptake through enzymatic GAG depolymerisation could be due to the combined effect
74 both of which bind GAGs and are critical for GAG-dependent oligomerization of the full-length protein
79 The exopolysaccharide galactosaminogalactan (GAG) is an important virulence factor of the fungal path
80 the biofilm matrix is galactosaminogalactan (GAG), a cationic polymer of alpha-1,4-linked galactose a
81 at the polysaccharide galactosaminogalactan (GAG) of A. fumigatus is a PAMP that activates the NLRP3
83 e structure and sulfation pattern of a given GAG, and structural differences among GAGs and among che
87 ith microbubbles enhanced glycosaminoglycan (GAG) production by 17% (5% with LIPUS alone), and type I
88 lose kinase essential for glycosaminoglycan (GAG) formation on the protein core of proteoglycans, fro
90 ing evidence of increased glycosaminoglycan (GAG) content in patients with post-stroke muscle stiffne
91 lycans (PGs), a family of glycosaminoglycan (GAG)-protein glycoconjugates, contribute to animal physi
92 Moreover, 1B6 recognized glycosaminoglycan (GAG)-bound CXCL10, resulting in target-mediated clearanc
93 nd/or chondroitin sulfate glycosaminoglycan (GAG) modifications in cells and has established roles in
96 en shown extensively that glycosaminoglycan (GAG)-protein interactions can induce, accelerate, and im
98 nd related members of the glycosaminoglycan (GAG) family are highly polyanionic linear saccharides th
102 ns, more complex natural glycosaminoglycans (GAG), and lectins/carbohydrate binding proteins using ma
109 ortant carbohydrates are glycosaminoglycans (GAGs), which display varied stereochemistry, chain lengt
110 nstrate that MCK-2 binds glycosaminoglycans (GAGs) with affinities in the following order: heparin >
114 iduronic acid containing glycosaminoglycans (GAGs) which are implicated in a number of biological pro
115 ral binding affinity for glycosaminoglycans (GAGs) and reduced viremia levels and the efficiency of r
116 n of vaccinia virus, for glycosaminoglycans (GAGs)-specific targeting and imaging of living cells.
120 c fibers, and pooling of glycosaminoglycans (GAGs), with associated losses of medial collagen in the
121 d by the xyloside-primed glycosaminoglycans (GAGs) and that these differ in composition depending on
122 GCX breakdown products [glycosaminoglycans (GAGs)] were quantified using dimethylmethylene blue (DMM
123 -derived heparan sulfate glycosaminoglycans (GAGs) but not to the closely related chondroitin sulfate
124 acterization of sulfated glycosaminoglycans (GAGs) by mass spectrometry has long been a formidable an
125 SPG)-associated sulfated glycosaminoglycans (GAGs) that are selectively up-regulated in the tumor mic
126 ally expressed, sulfated glycosaminoglycans (GAGs), like HS, in determining FH binding to and activit
131 of CXCL8 on cell-surface glycosaminoglycans (GAGs), an interaction that is vital for the function of
133 oupled to binding tissue glycosaminoglycans (GAGs), heparan sulfate (HS), chondroitin sulfate (CS), a
134 Sema3A interacts with glycosaminoglycans (GAGs), presumably through its C-terminal basic region.
137 etics and mobility studies using end-grafted GAG chains that mimic the end attachment of these chains
143 fs of heparan sulfate glycosaminoglycans (HS GAGs) play critical roles in many important biological p
144 sors greatly accelerates the synthesis of HS GAGs, providing key disaccharide and tetrasaccharide int
148 h the multivalent binding to the immobilized GAG brushes ensures firm virus attachment to the interfa
150 ative deacetylase, Agd3, leads to defects in GAG deacetylation, biofilm formation, and virulence.
154 CHIKV binding, define strain differences in GAG engagement, and provide further evidence for a criti
155 A. fumigatus glycoside hydrolase involved in GAG synthesis, and PelA, a multifunctional protein from
157 of the invariant arginine anchor residue in GAG result in global redistribution of PFV and macaque s
158 specimens, the application of CTS increased GAG synthesis, PGE(2) release and MMP activity, with con
161 ngs suggesting distinct roles for individual GAGs in outcomes related to valve lesion progression, as
162 :1) effectively suppressed IL-1alpha-induced GAG loss, cell death and inflammatory response significa
167 ogical data and decreased with applied load; GAG depleted cartilage exhibited higher hydraulic permea
169 dies provide a powerful approach for mapping GAG-protein interaction networks, revealing new potentia
172 cated in two non-overlapping domains mediate GAG interactions, and there is extensive overlap between
175 001), with no differences in DMMB-GAG and MS-GAG between CM and UM children or between those with and
176 able to study how monovalent and multivalent GAG.protein bonds respond to directed mechanical forces.
177 spatial arrangement of sulfates along native GAG chains may play a role in modulating the characteris
179 ey role in HSV binding, we tested two native GAGs (chondroitin sulfate and heparan sulfate) and compa
181 ithin 30min and enhanced the accumulation of GAG in the rectum compared to traditional enema-based de
184 of the potential therapeutic application of GAG polymers, fragments, and also derivatives toward dif
185 ressed this by characterizing the binding of GAG heparin oligosaccharides to hCXCL1 using NMR spectro
190 he prophylactic delivery of a single dose of GAG from a SELP matrix administered prior to irradiation
191 rmore we observed that a notable fraction of GAG-bound virions exhibit lateral mobility, although the
195 le method for analyzing the nanomechanics of GAG.protein interactions at the level of single GAG chai
197 e major capsid protein VP1, a broad range of GAG oligosaccharides bind to recessed regions between VP
198 version of MatrixDB: (i) cross-references of GAG sequences to the GlyTouCan database, (ii) representa
199 e GlyTouCan database, (ii) representation of GAG sequences in different formats (IUPAC and GlycoCT) a
200 arly, lost SMC function and accumulations of GAGs increase mechanical stress on nearby elastic lamell
206 further evidence for a critical function of GAGs in CHIKV cell attachment and infection.IMPORTANCE A
209 n understanding and interpreting the role of GAGs in neural development and axonal regeneration after
210 have focused on a relatively small subset of GAGs - particularly heparin, a readily available, promis
213 ng unable to recognize CXCL10 immobilized on GAG, we observed a similar superior control of diabetes
214 results also indicate that sulfate groups on GAGs are essential for CHIKV binding and that CHIKV bind
216 ng evidence that for many applications other GAGs are in fact more suitable for regulated and sustain
221 mposition of the XylNapOH- and XylNap-primed GAGs, which differed between the two cell lines but was
222 ototype foamy virus (PFV) structural protein GAG associates with chromosomes via a chromatin-binding
223 mapping of the upper arm muscles to quantify GAG content in patients with post-stroke muscle stiffnes
224 that T(1rho) mapping can be used to quantify GAG content in the muscles of patients with post-stroke
225 ction of CXCL10 with GAGs, did not recognize GAG-bound CXCL10, and did not display target-mediated dr
227 Mutants from both domains showed reduced GAG heparin binding affinities and reduced neutrophil re
228 t majority of studies of heparin (or related GAGs) interactions with its client proteins use syntheti
229 ransduction (Cx43, AKT), tissue remodelling (GAGs, elastin, collagen) and inflammation (PGE(2), MMPs)
231 ge degradation treatment with F4 inhibited s-GAG release from IL-1beta-treated human cartilage explan
234 .protein interactions at the level of single GAG chains, which provides new molecular-level insight i
237 as these interactions often require specific GAG sulfation patterns and involve transmembrane recepto
238 V, enhance our understanding of the specific GAG moieties required for CHIKV binding, define strain d
242 s research establishes that chicken sulfated GAG polysaccharides can enhance iron uptake by Caco-2 ce
243 nd computational study revealed how sulfated GAG derivatives (sGAG) influence the interplay of vascul
251 ue GAG sequences that can selectively target GAG-binding protein(s), which may lead to chemical biolo
252 mineralization, but to a lesser extent than GAG removal, despite a much larger effect on protein con
254 te the same CXCR2 receptor, we conclude that GAG interactions play a role in determining the nature o
255 omponent of AD plaques, and they reveal that GAG-amyloid interactions display a range of affinities t
256 mission electron microscopy (TEM) shows that GAG removal reduced the rate of remineralization in mine
258 Collectively, these data demonstrate that GAGs are the preferred glycan bound by CHIKV, enhance ou
260 the arrangement of sulfate groups along the GAG chain, plays a key role in HSV binding, we tested tw
261 ) has also been identified previously as the GAG-binding domain for the related chemokine CXCL8/IL-8.
262 lude that a finely tuned balance between the GAG-bound dimer and free soluble monomer regulates CXCL5
263 menclature For Glycans) images and (iii) the GAG Builder online tool to build 3D models of GAG sequen
264 magic-angle spinning solid-state NMR of the GAG bound to 3Q fibrils, and measurements of dynamics re
265 y the method to study the interaction of the GAG polymer hyaluronan (HA) with CD44, its receptor in v
266 ating selectivity in the interactions of the GAG with the fibril that extends beyond general electros
268 e here the development and validation of the GAG-Dock computational method to predict accurately the
269 mplementarity of the sulfate moieties on the GAG and charged residues displayed on the fibril surface
273 ithin a monomer and, interestingly, that the GAG-binding domain overlaps with the receptor-binding do
274 MAbs was mapped to a region adjacent to the GAG binding site, a finding which suggests that group I
276 ant protein rDA27(aa 33-84) that removes the GAGs-binding sequences was also used for comparison.
278 that the recombinant proteins maintain their GAG-targeting activities even after immobilization on th
281 r both chemokines, the dimer bound all three GAGs with higher affinity than did the monomer, and affi
283 d, possibly through contacts to Lys(18) Thus GAGs significantly modulate sCT fibrillation in a pH-dep
287 ypothesis, according to which SICHI binds to GAGs, thereby perturbing the Sema3A-GAG interaction.
289 of these viral protein-FND conjugates toward GAGs binding was examined by flow cytometry, fluorescenc
290 l techniques can lead to discovery of unique GAG sequences that can selectively target GAG-binding pr
293 uminate the beneficial properties of various GAGs with reference to specific protein cargoes, and to
294 ghlights the complexity of multivalent virus-GAG interactions and suggests that the spatial arrangeme
296 e oligomerized; thus, the mechanism by which GAG binds these chemokine oligomers has been elusive.
298 amellar disruption and cellular dropout with GAG production and lost medial collagen that is more pro
299 1 lysine-substituted elastin-like unit) with GAG GM-0111, we created an injectable delivery platform
300 F11 inhibited the interaction of CXCL10 with GAGs, did not recognize GAG-bound CXCL10, and did not di