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1 MTAP deletion and mutational activation of KRAS create t
2 MTAP deletion occurs in 10-15% of all human cancers due
3 MTAP differs from previous attempts at regulatory motif
4 MTAP encodes the enzyme methylthioadenosine phosphorylas
5 MTAP expression causes a significant decrease in intrace
6 MTAP expression does not affect the growth rate of cells
7 MTAP is a ubiquitously expressed homotrimeric-subunit en
8 MTAP is abundant in normal cells but is deficient in man
9 MTAP is frequently lost due to its proximity to the comm
10 MTAP loss causes accumulation of methylthioadenosine (MT
11 MTAP presents a new approach to the challenging problem
12 MTAP(+) normal keratinocytes and pancreatic carcinoma li
13 MTAP(-) T-ALL-derived cell line, CEM cells were very sen
14 MTAP-deleted cells accumulate the metabolite methylthioa
15 MTAP-negative A549 lung cancer cells were transfected wi
17 te methylthioribosyltransferase, EC 24.2.28; MTAP) plays a role in purine and polyamine metabolism an
18 Furthermore, a historic cohort shows 4 of 4 MTAP(def) patients respond to pemetrexed as compared to
19 al studies have shown ICI resistance in 9p21/MTAP null/low patients, we propose that MTA degrading th
20 or in combination with a salvage agent as a MTAP-selective therapy and therefore lay the foundation
38 st gene flanking each side being MIR31HG and MTAP, neither of which has been implicated in BMD or BMC
39 tend to have reduced levels of Mtap mRNA and MTAP protein in addition to unaltered levels of methylde
44 tal adenocarcinoma (PDAC), ~22% of which are MTAP-del, and demonstrated that BMS-986504 suppressed PR
48 xobutanoic acid represses ODC levels in both MTAP-deleted yeast and human tumor cell lines, indicatin
49 AMP synthesis, inhibited the growth of both MTAP(+) (Molt-4 and Molt-16) and MTAP(-) (CEM and HSB2)
51 of 5'-methylthioadenosine (MTA) catalyzed by MTAP and were corrected for the forward commitment to ca
54 ed in polyamine synthesis and is recycled by MTAP to S-adenosyl-L-methionine (SAM) via salvage pathwa
55 omic profiling, we show that MTA secreted by MTAP-deleted cells in vitro results in high levels of ex
58 ad tumors with homozygous deletion of CDKN2A/MTAP and/or loss of MTAP protein by immunohistochemistry
59 Six distinct retroviral-sequence-containing MTAP isoforms, each of which can physically interact wit
62 o 15-fold-selective killing of MTAP-deleted (MTAP-null) cells compared to MTAPintact (MTAP WT) cells.
63 ee of the four cell lines lacking detectable MTAP protein were unable to grow in Hcy-containing media
64 r hypermethylation was shown to downregulate MTAP expression and may represent a mechanism of MTAP in
66 ccharomyces cerevisiae the MEU1 gene encodes MTAP and that Meu1delta cells have an 8-fold increase in
69 fficacious in mouse xenografts of endogenous MTAP-null tumors such as BxPC-3 (96% TGI @ 100 mg/kg QD)
70 that, in addition to deletion of the entire MTAP gene, a common break point was between exons 4 and
76 e may be selection in early stages of MF for MTAP deletion within the cutaneous tumor microenvironmen
77 nhibitors are the most powerful reported for MTAP and have sufficient affinity to be useful in inhibi
79 proved DMPK properties that is selective for MTAP-deleted cancers and is currently in Phase I/II clin
81 Methylthioadenosine (MTA), the substrate for MTAP, is formed in polyamine synthesis and is recycled b
85 referential impairment of cell viability for MTAP-null cancer cell lines compared with isogenic MTAP-
88 SSM-specific genomic deletions in G3BP2, MTAP, and SEC23IP were independently verified in two ext
89 ified 8 genes (DIS3, FGFR1OP, G3BP2, GALNT7, MTAP, SEC23IP, USO1, and ZNF668) in which NM/SSM-specifi
90 ed overexpression of metabolism-related gene MTAP (methylthioadenosine phosphorylase) in SSM resulted
91 the methylthioadenosine phosphorylase gene (MTAP) results in accumulation of the metabolite 2-methyl
92 ors are now in clinical trials for genotypic MTAP(-/-) cancers, however the MTAP(-/-) genotype repres
95 e that inhibited the proliferation of HCT116 MTAP-deleted cells with ~40x selectivity over HCT116 MTA
99 ese data show a high frequency of homozygous MTAP deletions in NSCLC which is associated with detecta
100 KN2B deletion breakpoints reveals homozygous MTAP deletions in 32-34% of NPCs that confer marked sens
103 s for the proposed transition state of human MTAP on the basis of the known ribooxacarbenium characte
104 The more enclosed catalytic sites of human MTAP require the inhibitors to adopt a folded structure,
107 We kinetically characterize 2AMTA with human MTAP, bacterial MTANs and use 2,6-diaminopurine as a flu
109 x and selectively inhibits PRMT5 activity in MTAP-deleted cells compared to MTAP-wild-type cells.
110 Of 23 malignant cell lines deficient in MTAP protein, all but one had complete or partial deleti
114 nation therapy mimics synthetic lethality in MTAP(+/+) CRC cell lines with similar effects in mouse x
116 ric dimethylarginine protein modification in MTAP-deleted tumors that correlated with antitumor activ
119 al (NCT02693717) that assesses pemetrexed in MTAP(def) urothelial carcinoma (UC) with the primary end
120 itor, AM-9934, selectively inhibits PRMT5 in MTAP-deleted cells and in transplanted tumors while spar
121 -state levels of sDMA-containing proteins in MTAP+ cells, even though no sustained increase in intrac
122 e identified strongly associated variants in MTAP, a gene adjacent to the familial melanoma susceptib
125 d cells with MT-DADMe-ImmA and MTA inhibited MTAP, increased cellular MTA concentrations, decreased p
126 However, when we introduced MTAP cDNA into MTAP-deficient MCF-7 cells, the resulting cell line was
127 e that normal cells, which are intrinsically MTAP+, would be protected from L.-alanosine toxicity, wh
130 on profiles in GBM samples revealed that low MTAP expression is correlated with an increased proporti
131 th SAM, MTA partially inhibits PRMT5, making MTAP-deleted tumors susceptible to further PRMT5 inhibit
136 lished BATTLE2 clinical trial (NCT01248247), MTAP(def) associates with an improved response rate to p
137 struct (antisense transfectoma) expressed no MTAP protein and were more sensitive to both purine and
138 hesized and evaluated a potentially nontoxic MTAP substrate, 9-beta-D-erythrofuranosyladenine (EFA).
139 have only been tested in naturally occurring MTAP-positive and -negative cell lines, which might have
140 e other hand, the IC50 for 60% (12 of 20) of MTAP+ primary T-ALL was 19+/-18 microM (range, 1.7-67 mi
141 se chain reaction amplification of exon 8 of MTAP showed a deletion in 16 of 48 (33.3%) patients at d
142 luoromethylornithine inhibits the ability of MTAP-deficient cells to form colonies in soft agar, wher
143 s to be because of the enzymatic activity of MTAP, as a protein with a missense mutation in the activ
144 e inhibitors can leverage the consequence of MTAP deletion, namely, accumulation of the MTAP substrat
147 ability for tumors carrying a co-deletion of MTAP and the adjacent CDKN2A tumor suppressor gene.
151 putative salvage pathway genes downstream of MTAP also cause elevated ODC activity and elevated polya
152 eted cell lines in culture show elevation of MTAP's substrate metabolite, methylthioadenosine (MTA).
157 ubstrate adaptor interface impairs growth of MTAP-null tumor cells and is thus a site for development
158 MTDIA causes a physiologic inactivation of MTAP and may also have efficacy in combination with inhi
161 adenosine (MTA) was blocked by inhibition of MTAP with methylthio-DADMe-Immucillin-A (MTDIA), an oral
163 lex, leading to 15-fold-selective killing of MTAP-deleted (MTAP-null) cells compared to MTAPintact (M
174 ion of methylthioadenosine, the substrate of MTAP, protected the MTAP(+) cells but not the MTAP(-) ce
175 aging antitumor activity across a variety of MTAP-deleted solid tumors was observed based on objectiv
176 line models, we found that the viability of MTAP-deficient cancer cells is impaired by depletion of
180 ase adenine, loss of this pathway in p16(-), MTAP(-) cells might sensitize these cells to methotrexat
185 we reintroduced MTAP activity into two p16-, MTAP- cell model systems, the MiaPaCa-2 and PANC-1 human
186 ral PRMT5 inhibition was confirmed in paired MTAP-deleted tumor biopsies, and molecular responses (ci
188 -deoxy-5'-methylthioadenosine phosphorylase (MTAP) and the genes of the IFN-alpha and -beta cluster (
190 ied as 5'-methylthioadenosine phosphorylase (MTAP) based on its biochemical properties and mass spect
191 (CDKN2A)/methylthioadenosine phosphorylase (MTAP) codeletion occurs frequently in non-small cell lun
192 he enzyme methylthioadenosine phosphorylase (MTAP) confers a selective dependence on protein arginine
193 zygous 5'-methylthioadenosine phosphorylase (MTAP) deletions occur in approximately 15% of human canc
194 Loss of Methylthioadenosine Phosphorylase (MTAP) expression, via gene deletion or epigenetic silenc
195 The human methylthioadenosine phosphorylase (MTAP) gene is located on 9p21 and is frequently homozygo
196 on of the methylthioadenosine phosphorylase (MTAP) gene results in accumulation of methylthioadenosin
197 enzyme 5'-methylthioadenosine phosphorylase (MTAP) has been implicated as both a cancer target and a
198 letion of methylthioadenosine phosphorylase (MTAP) in cancers such as glioblastoma represents a poten
199 ciency of methylthioadenosine phosphorylase (MTAP) in T-cell acute lymphoblastic leukemia (T-ALL) and
200 letion of methylthioadenosine phosphorylase (MTAP) is a common genomic alteration in human tumors but
202 Human methylthioadenosine phosphorylase (MTAP) is a purine and methionine metabolic enzyme presen
204 -Deoxy-5'-methylthioadenosine phosphorylase (MTAP) is involved in the salvage of adenine and methylth
205 N2A/B and methylthioadenosine phosphorylase (MTAP) is one of the most frequent genetic deletions in c
207 s lacking methylthioadenosine phosphorylase (MTAP), a common genetic event associated with poor progn
209 Human 5'-methylthioadenosine phosphorylase (MTAP), a reported anticancer target, catalyzes phosphoro
212 ciency of methylthioadenosine phosphorylase (MTAP), both located on chromosome 9p21, have been indepe
213 ay enzyme methylthioadenosine phosphorylase (MTAP), frequently deleted in cancer, affects methionine
214 encoding methylthioadenosine phosphorylase (MTAP), the initial enzyme in the methionine salvage path
215 relies on methylthioadenosine phosphorylase (MTAP), the rate-limiting enzyme, to relieve strain.
222 yme methylthioadenosine (MTA) phosphorylase (MTAP) in 36% of lines, transcription factor DMRTA1 (27%)
225 EFA at 20 microM or less rescued primary MTAP+ T-ALL cells and normal lymphocytes from L-alanosin
227 MTAP copy number loss (P < 0.01) but reduced MTAP expression was also detected in the absence of copy
230 nd the underlying mechanism, we reintroduced MTAP activity into two p16-, MTAP- cell model systems, t
232 AP-dependent adenine salvage pathway renders MTAP+ cells less dependent on de novo purine synthesis a
234 that EFA is an effective agent for salvaging MTAP+ cells from L-alanosine toxicity and is superior to
235 ethyltransferase 5 (PRMT5), which sensitizes MTAP-deleted cells to PRMT5 and methionine adenosyltrans
236 ne incorporation, DNA synthesis in all seven MTAP-primary T-ALL cells was inhibited by L-alanosine wi
238 0 loci (TYR, AFG3L1P, CDK10, MYH7B, SLC45A2, MTAP, ATM, CLPTM1L, FTO, and CASP8) that have previously
239 lls and in transplanted tumors while sparing MTAP-expressing counterparts, leading to specific suppre
240 n 213 skin samples from patients with MF/SS, MTAP copy number loss (34%) was more frequent than CDKN2
243 e PRMT5 inhibitor EZP015556, shown to target MTAP (a gene commonly lost in pancreatic cancer)-negativ
245 ne synthesis and hence less susceptible than MTAP- malignant cells to the growth-inhibitory actions o
254 late polyamine biosynthesis and suggest that MTAP deletion may lead to ODC activation in human tumors
255 sic KIEs (1'-(14)C and 9-(15)N) suggest that MTAP has a dissociative S(N)1 transition state with its
259 from endogenously generated MTA, because the MTAP inhibitor 5'-chloro-5'-de- oxyformycin A potentiate
260 fection with MTAP cDNA (i) restored both the MTAP-dependent adenine and methionine salvage pathways,
261 ere rescued from L-alanosine toxicity by the MTAP substrate 5'-deoxyadenosine, but MTAP-T-ALL cells w
263 for genotypic MTAP(-/-) cancers, however the MTAP(-/-) genotype represents fewer than 2% of human col
267 cancer cells with homozygous deletion of the MTAP gene if the inhibitors can leverage the consequence
274 support the hypothesis that operation of the MTAP-dependent adenine salvage pathway renders MTAP+ cel
275 Hcy-containing media, whereas all six of the MTAP-positive cell lines tested showed strong growth.
276 nosine, the substrate of MTAP, protected the MTAP(+) cells but not the MTAP(-) cells from alanosine t
284 10(-14) for rs1393350) and 9p21 adjacent to MTAP and flanking CDKN2A (P = 4.03 x 10(-7) for rs702332
290 cells may be exploited to selectively treat MTAP-negative cancers by inhibiting de novo purine synth
293 morigenesis is well established, but whether MTAP loss directly affects tumorigenesis is unclear.
295 is suggested focal deletions consistent with MTAP and CDKN2A copy number loss detected with quantitat
296 reduced MTAP mRNA expression correlated with MTAP copy number loss (P < 0.01) but reduced MTAP expres
298 We further investigated the ten samples with MTAP deletions but intact p16INK4A exon 1alpha with prim
299 at formed an in frame fusion transcript with MTAP in a glioma xenograft, and that is homozygously del