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1 NS3 and NS5 are highly conserved among the four serotype
2 NS3 features two conserved RecA-like domains (D1 and D2)
3 NS3 has NS2B-dependent protease, RNA helicase, and 5'-RN
4 NS3, encoded by Seg-10 of the BTV genome, fulfills key r
5 NS3-dependent cleavage of the HCV polyprotein is require
6 NS3-NS4A evades antiviral innate immunity by inactivatin
7 NS3-NS4A therefore prevents IRF3 activation and interfer
8 ing and duplex unwinding, we show that JFH-1 NS3 binds RNA much more rapidly than the previously stud
9 ike NS3 variants from other genotypes, JFH-1 NS3 binds RNA with high affinity in a functionally activ
10 e other superfamily 2 (SF2) helicases, JFH-1 NS3 does not require long 3' overhangs, and it unwinds d
11 e 1b NS3, which has been well studied, JFH-1 NS3 is a superhelicase with strong RNA affinity and high
12 is, we solved the crystal structure of JFH-1 NS3, revealing a novel conformation that contains an ope
14 eveal that the genetic variability of Seg-10/NS3 differentially modulates BTV replication kinetics in
15 ghlights that genetically distant BTV Seg-10/NS3 influence BTV biological properties in a host-specif
16 this study, we revealed that various Seg-10/NS3 proteins alter BTV replication kinetics in mammals b
18 Indeed, unlike the inefficient genotype 1b NS3, which has been well studied, JFH-1 NS3 is a superhe
19 d potency of current inhibitors against GT-3 NS3/4A protease is elucidated with structure determinati
20 phism, Q80K, in the nonstructural protein 3 (NS3) gene encoding the viral protease, which has been as
23 protein followed by nonstructural protein 3 (NS3), NS2A, and NS5 were the most targeted proteins.
27 o recognize the HCV nonstructural protein 3 (NS3):1406-1415 epitope with high specificity when presen
32 laprevir 50% effective concentration against NS3 from protease inhibitor-naive patient samples ranged
35 5A inhibitor, and paritaprevir (ABT-450), an NS3/4A protease inhibitor dosed with ritonavir (ombitasv
36 svir (an NS5A inhibitor) and grazoprevir (an NS3/4A protease inhibitor) are direct-acting antiviral a
37 svir (an NS5A inhibitor) and grazoprevir (an NS3/4A protease inhibitor) are direct-acting antiviral a
38 brentasvir is a fixed-dose combination of an NS3/4A protease inhibitor and an NS5A inhibitor approved
39 vir, an NS5A inhibitor, and paritaprevir, an NS3/4A protease inhibitor dosed with ritonavir, plus rib
40 inhibitor), paritaprevir, and ritonavir (an NS3/4A protease inhibitor)-an interferon- and ribavirin-
41 f 3 weeks of response-guided therapy with an NS3 protease inhibitor and dual NS5A inhibitor-NS5B nucl
44 We evaluated this model using BVDV E2 and NS3 proteins formulated in poly-(D, L-lactic-co-glycolic
46 cant virus-neutralizing activity, and E2 and NS3 specific antibodies were observed in both Vaccine-NP
48 e protective effects conferred by DJ NS1 and NS3 immunization in the mouse model of DENV infection an
49 protective effects attributed by DJ NS1 and NS3 immunization were demonstrated in a DENV-infected mo
50 l ribosome entry site (IRES) between NS2 and NS3 to separate the two proteins independently of NS2-me
51 hat when expressed individually, MNV NS3 and NS3 encoded by human Norwalk virus (NV) induced the form
52 line hepatitis C virus (HCV) NS5A, NS5B, and NS3 resistance-associated substitutions (RASs) on respon
58 ds targeting the HCV non-structural antigens NS3, NS4, and NS5, were previously reported to induce ro
60 l protein 5A [NS5A] inhibitor), asunaprevir (NS3 protease inhibitor), and beclabuvir (nonnucleoside N
61 for a serotype-specific interaction between NS3 and NS5 as well as specific interdomain interaction
65 ors (PIs) to the protease active site blocks NS3-dependent polyprotein processing but might impact ot
72 omponents of the genome replication complex (NS3, double-stranded RNA, and cellular lipids, including
73 osteric, mostly hydrophobic pocket of dengue NS3 and hold the protease in an open, catalytically inac
74 munity, we further combined DJ NS1 with DENV NS3 to immunize mice and showed activation of Ag-specifi
75 ENV4 NS5 MTase or POL domain or in the DENV2 NS3 helicase domain in the DENV2 chimera RNAs by repeate
77 3 peptide spanning residues 566-585 disrupts NS3-NS5 interaction but not the null-peptide bearing the
79 nally, the differential behavior of distinct NS3 helicase knockout mutations hints that certain confo
80 se activity of the ZIKV NS3 helicase domain (NS3(Hel)) were investigated in vitro and we demonstrated
85 genotype 1 to 6 replicons bearing engineered NS3 resistance-associated substitutions (RASs) were test
87 the smA1' mutant virus that does not express NS3 and NS4 replicated in HAE-ALI as effectively as the
89 nomic replicon RNA or ectopically expressing NS3-4A; and biochemical evidence that NS3-4A cleaves DHC
90 te that, in addition to being a cofactor for NS3 protease, flavivirus NS2B also functions in viral RN
92 ds 51 to 95) alone of NS2B is sufficient for NS3 protease activity, whereas the role of transmembrane
94 an 8-week regimen combined with grazoprevir (NS3/4A inhibitor; 100 mg once daily) and an NS5A inhibit
95 cacy and safety of grazoprevir (MK-5172; HCV NS3/4A protease inhibitor) and two doses of elbasvir (MK
97 ve treatment duration of grazoprevir (an HCV NS3/4A protease inhibitor) combined with elbasvir (an HC
98 drug regimen of grazoprevir (MK-5172; an HCV NS3/4A protease inhibitor; 100 mg/day) plus ruzasvir (MK
99 ents showing co-occurrence of DHCR24 and HCV NS3-4A protease; formation of an additional, faster-migr
100 d the effect of amino acid variations in HCV NS3 of genotype 1a, 1b, 2b and 3a on NS3-fluoroquinolone
101 667, 101 and 248 nucleotide sequences of HCV NS3 genotypes 1a, 1b, 2b, and 3a, respectively, and tran
102 vergent synthesis of a complex target of HCV NS3/4a protease inhibitor BI 201420 was accomplished.
104 ed genotype 1a-derived HLA-A2-restricted HCV NS3-1073 or NS5-2594 epitope were generated from a genot
105 COSMOS study that evaluated simeprevir (HCV NS3/4A protease inhibitor) + sofosbuvir (HCV nucleotide
106 vealed that individual genotype-specific HCV NS3 showed substantial sequence heterogeneity that resul
108 ion and/or deep sequence analyses of the HCV NS3, NS5A, and NS5B genes were performed on blood sample
109 n intracellular desmosterol, whereby the HCV NS3-4A protease controls activity of 24-dehydrocholester
110 that limits HCV infection.IMPORTANCE The HCV NS3-NS4A protease complex facilitates viral replication
111 ation with genetic vaccines encoding the HCV NS3-NS5b nonstructural proteins during DAA treatment res
113 specific antibody and T-cell response to HCV NS3 in this viremia-resolved marmoset was boosted by rec
117 ocyclic inhibitor of hepatitis C virus (HCV) NS3/4A protease and was developed for treating chronic H
118 y of a pan-genotypic hepatitis C virus (HCV) NS3/4A protease inhibitor based on a P1-P3 macrocyclic t
119 ity landscape of the hepatitis C virus (HCV) NS3/4A protease, whose function-site-specific cleavages
120 member of the superfamily 2 (SF2) helicases, NS3 requires the binding and hydrolysis of ATP/NTP to tr
121 anner and increases our understanding of how NS3 proteins contribute to the outcome of BTV infection.
122 n) showed that positions 56, 156, and 168 in NS3 were most impactful because they diminished protein-
123 sistent with the detection of R155K/D168A in NS3 from virologic failures treated with simeprevir but
124 tance-associated substitutions identified in NS3 from GT1a-infected patients who failed therapy with
125 diated by a negatively charged RLDP motif in NS3 that is conserved in ZIKV strains of African and Asi
126 ighly conserved phosphomimetic RxEP motif in NS3 was essential for the binding of 14-3-3varepsilon.
129 r interactions of PI resistance mutations in NS3-4A can impact protease functional sites dependent on
134 rgent resistance-associated substitutions in NS3 and NS5A were observed in 9 and 10 patients with tre
137 nd that the T407A and S411A substitutions in NS3 reduce viral replication and increase the helicase-u
138 more, we identified 2 other substitutions in NS3 that may interact with Q80K and contribute to its st
141 rect-acting antivirals against HCV including NS3/4A protease inhibitors (PIs) has greatly improved tr
142 is sensor containing the flavivirus internal NS3 cleavage site linker reported the highest fluorescen
144 NS3(172-618) helicase and covalently linked NS3(172-618)-NS5(320-341) reveals a rigid and compact fo
145 mly assigned to receive grazoprevir (100 mg, NS3/4A protease inhibitor) and elbasvir (50 mg, NS5A inh
146 ngs: those requiring expression of a minimum NS3-5A and those requiring expression of a minimum NS3-5
147 h K1240N inhibiting replication as a minimum NS3-5A polyprotein whereas V1665G and S1977P only impair
149 -derived vesicular structures induced by MNV NS3 were highly motile and dynamic in nature, and their
150 in, an indicator of cholesterol content, MNV NS3 displayed a greater association with flotillin and s
151 served that when expressed individually, MNV NS3 and NS3 encoded by human Norwalk virus (NV) induced
152 is study reveals that murine norovirus (MNV) NS3 is intimately associated with the viral replication
153 NAJC14's folding activity normally modulates NS3/4A/2K cleavage events to liberate appropriate levels
155 al-time live-cell reporter, termed the NIrD (NS3-4A Inducible rtTA-mediated Dual-reporter) system, wh
159 and the 3'-UTR and, similar to HCV, the NPHV NS3-4A protease can cleave mitochondrial antiviral-signa
160 TCRs) recognizing the HCV nonstructural (NS) NS3 or NS5 viral peptide target were examined by mRNA tr
163 found that the other NS proteins (NS1, NS2, NS3, and NS4) are not required for the expression of VP
165 udy identified three novel NS proteins, NS2, NS3, and NS4, and suggests an important function of the
166 NA replication and virus assembly, i.e., NS2-NS3 autoprocessing and E2 recruitment to the DRM, are re
167 ase is responsible for autoprocessing of NS2-NS3 precursor, an essential step in HCV RNA replication.
169 ntroducing an NS2/C113S mutation reduced NS2-NS3 autoprocessing and impaired HCV RNA replication.
170 direct-acting antiviral targeting DENV, NS2/NS3 protease is a promising target for inhibitor design.
173 so recruits the C-prM-E polyprotein and NS2B-NS3 protease to the virion assembly site by interacting
179 e describe a role for the ZIKV protease NS2B-NS3 heterodimer in mediating neurotoxicity through cleav
183 h is demonstrated with the dengue virus NS2B-NS3 protease in complex with a high-affinity ligand cont
185 virus (DENV) and West Nile Virus (WNV) NS2B-NS3 proteases are attractive targets for the development
186 losteric site shared between flaviviral NS2B/NS3 proteases is presented whose efficacy is demonstrate
190 not NS5A(S25-K215), enabled the NS5BDelta21-NS3 helicase complex to be stably associated with the te
191 ribution of MNV and NV NS3s were similar, NV NS3 displayed a higher level of colocalization with the
192 by HCV GT/subtype and presence or absence of NS3 Q80K polymorphism [GT1b, GT1a with Q80K, GT1a withou
193 I1373-1380 located in the helicase domain of NS3 in people who inject drugs (PWID) exposed predominan
195 ntains potent activity against a majority of NS3 resistance-associated amino acid substitutions, incl
196 This work reveals that DNAJC14 modulation of NS3/4A site processing is an important mechanism to ensu
199 dy reveals a previously unidentified role of NS3/4A in regulation of host BCR signaling during HCV in
200 analysis revealed a pre-activation state of NS3 helicase in complex with GTPgammaS, in which the tri
201 tructure deviates significantly from that of NS3 of other genera in the Flaviviridae family in D3, as
206 ortance of this protein, mechanistic work on NS3 has been conducted almost exclusively on variants fr
208 sbuvir and velpatasvir plus the pangenotypic NS3/4A protease inhibitor voxilaprevir (sofosbuvir-velpa
209 mbitasvir (NS5A inhibitor) and paritaprevir (NS3/4A protease inhibitor; co-dosed with ritonavir) plus
214 expression of the hepatitis C virus protease NS3/4A, which efficiently cleaves TRIF and IFN-beta prom
218 in) fused to the nonstructural (NS) proteins NS3-NS5B from RHV (ChAd-NS) was used to vaccinate Spragu
221 btype-specific role for the protease residue NS3-Q80 in molecular mechanisms related to the assembly
222 he replicon system, we show that the RHV-rn1 NS3-4A protease cleaves a human mitochondrial antiviral
223 ChAd-NS or with a plasmid encoding the same NS3-NS5B antigens increased efficacy to 100% and 83%, re
224 w model where an LGP2-MDA5 oligomer shuttles NS3 to the mitochondria to block antiviral signaling.
229 gesting that flaviviruses may use suboptimal NS3 helicase activity for optimal genome replication.
231 itro and in vivo We further demonstrate that NS3-4A cleaves DHCR24 between residues Cys(91) and Thr(9
232 Together, these studies demonstrate that NS3-4A directly cleaves DHCR24 and that this results in
233 essing NS3-4A; and biochemical evidence that NS3-4A cleaves DHCR24 to produce DHCR24* in vitro and in
237 T-PCR for the NS3:N570A mutant suggests that NS3-NS5 interaction plays an important role in the balan
241 overexpressed wild-type DNAJC14 affected the NS3/4A and NS4A/2K cleavage sites, resulting in altered
243 Of patients treated with LDV, SOF, and the NS3/4A protease inhibitor GS-9451 for 6 weeks, 76% (38 o
244 vir, the NS5A inhibitor velpatasvir, and the NS3/4A protease inhibitor GS-9857 in patients with hepat
245 vir, the NS5A inhibitor velpatasvir, and the NS3/4A protease inhibitor GS-9857 in these patients.
246 with the NS5A inhibitor velpatasvir and the NS3/4A protease inhibitor GS-9857, in patients with hepa
248 erone function to modulate processing at the NS3/4A site as a mechanism ensuring virus replication.
249 e introduced amino acid substitutions at the NS3/4A site to alter the levels of the NS3 and NS4A prod
252 of which produced a clinical candidate: the NS3 protease inhibitor asunaprevir (64), marketed as Sun
253 l remain unclear, including the role for the NS3 protein, one of seven nonstructural viral proteins,
254 nd RNA synthesis by real time RT-PCR for the NS3:N570A mutant suggests that NS3-NS5 interaction plays
256 tis C virus (HCV) requires proteins from the NS3-NS5B polyprotein to create a replicase unit for repl
258 the NS4B5A boundary (S1977P), another in the NS3 helicase (K1240N), and a third in NS4A (V1665G).
259 in, 5 hinge regions in the NS2B bound in the NS3 protease complex and 5 hinges in the NS3- helicase p
262 A variety of amino acid substitutions in the NS3-4A protease of the hepatitis C virus lead to proteas
263 replication by a noncytotoxic mechanism, the NS3-specific TCR-redirected CTLs were polyfunctional and
264 t the NS3/4A site to alter the levels of the NS3 and NS4A products and examined their effects on YFV
267 ety of treatment with the combination of the NS3/4A protease inhibitor glecaprevir and the NS5A inhib
268 s approach, we showed that, depending on the NS3 considered, BTV replication kinetics varied in mamma
271 mpetitive NS3-NS5 interaction ELISA that the NS3 peptide spanning residues 566-585 disrupts NS3-NS5 i
275 response at 12 weeks (SVR12) rate using the NS3/4A protease inhibitor grazoprevir and the NS5A inhib
281 covery of a back-up to the hepatitis C virus NS3 protease inhibitor asunaprevir (2) is described.
284 We therefore set out to determine whether NS3 from the replicatively efficient genotype 2a strain
287 chy of the DENV nonstructural proteins, with NS3, NS5, and NS1 being dominant in both donor cohorts.
288 revir susceptibilities of HCV replicons with NS3 RASs were dependent on subtype background and the ty
289 avior--a characteristic probably shared with NS3 helicases from all Flaviviridae members--that could
290 TP hydrolysis and helicase activities within NS3 and provide insight into the biophysical mechanisms
292 these distinct regulatory mechanisms within NS3-NS4A and defines a new role for Riplet in the antivi
295 NS4B protein), and the immunorecessive YTM9 (NS3 protein)-and used these TCRm mAbs to stain WNV-infec
299 tability and the ATPase activity of the ZIKV NS3 helicase domain (NS3(Hel)) were investigated in vitr
300 predicted that FAM E3 might bind to the ZIKV NS3 helicase suggesting that this protein could be one p