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1 ologically relevant arabinose transporter in Neurospora.
2 result in synchronized nuclear divisions in Neurospora.
3 d phenomenon from repetitive genomic loci in Neurospora.
4 y silences repetitive DNA and transposons in Neurospora.
5 le for RIC8 in regulating GNA-1 and GNA-3 in Neurospora.
6 tly different from what has been observed in Neurospora.
7 light-regulated transcriptional responses in Neurospora.
8 served in other organisms were identified in Neurospora.
9 ylation sites in core histones isolated from Neurospora.
10 equences for targeting to the his-3 locus in Neurospora.
11 PROTEIN 1 (HP1) and associated proteins from Neurospora.
12 dian- and light-regulated gene expression in Neurospora.
13 ated genes are also dsRNA-activated genes in Neurospora.
14 e and prevents Vivid from sending signals in Neurospora.
15 the polypyrimidine tract, is also present in Neurospora.
16 than common codons in all codon families in Neurospora.
17 is required for circadian clock function in Neurospora.
18 rom Period in mammals and frequency (frq) in Neurospora.
19 g codon usage bias in the filamentous fungus Neurospora.
22 inery and experimental validations employing Neurospora and brings a deeper understanding of molecula
26 e the most studied meiotic drive elements in Neurospora, and they each theoretically contain two esse
27 pretation of ongoing experimental efforts in Neurospora, and we anticipate that our methods will subs
28 by analyzing small RNAs associated with the Neurospora Argonaute protein QDE-2, we show that diverse
29 component of the chromosome conformation in Neurospora, but two widely studied key heterochromatin p
30 genetics experiments originally performed on Neurospora by comprehensively predicting nutrient rescue
34 nown to bind H3K4me3 in mammalian cells, and Neurospora CHD1 is required for proper regulation of the
36 the telomere regions of other organisms, the Neurospora chromosome termini still retain the dynamic n
37 stimuli that activate the expression of the Neurospora circadian clock gene frequency (frq), can tri
39 , we constructed a mathematical model of the Neurospora circadian clock incorporating the above WC-1/
48 es similar components and circuitry with the Neurospora circadian system, although we found that its
52 regulator of temperature compensation of the Neurospora clock by determining that two long-standing c
53 in phosphatase 4 is a novel component of the Neurospora clock by regulating both processes of the cir
54 an period defects in two classically derived Neurospora clock mutants each arise from disruption of c
55 frequency (frq) encodes a component of the Neurospora core circadian negative feedback loop, which
57 is study, we have characterized an LPMO from Neurospora crassa (NcLPMO9C; also known as NCU02916 and
58 he deprotonation of nitroethane catalyzed by Neurospora crassa 2-nitropropane dioxygenase was investi
60 with the corresponding dicer-like genes from Neurospora crassa [Ncdcl-1 (50.5%); Ncdcl-2 (38.0%)] and
62 of the homolog in the filamentous ascomycete Neurospora crassa affects the circadian clock output, yi
63 ocarpus sp. (Chromista), and the ascomycetes Neurospora crassa and Aspergillus nidulans (Fungi), and
65 rgillus nidulans, Aspergillus fumigatus, and Neurospora crassa and expressed the genes as secreted pr
66 yed stage-specific expression and editing in Neurospora crassa and F. verticillioides Furthermore,F.
67 f4, inhibits growth of the ascomycete fungi, Neurospora crassa and Fusarium graminearum, at micromola
68 mediated silencing in the filamentous fungus Neurospora crassa and identified a bromo-adjacent homolo
70 he ascomycete fungi Fusarium graminearum and Neurospora crassa and induces accumulation of reactive o
73 ies of the starch-active PMOs from the fungi Neurospora crassa and Myceliophthora thermophila, NcAA13
75 wealth of sequence information available for Neurospora crassa and other fungi has greatly facilitate
79 ferase center (PTC) function was analyzed in Neurospora crassa and wheat germ translation extracts us
80 6p of Saccharomyces cerevisiae and CYT-19 of Neurospora crassa are ATP-dependent helicases that funct
82 ces cerevisiae GCN4, S. cerevisiae CPA1, and Neurospora crassa arg-2, regulation by uORFs controls ex
83 eatures using an in vivo tethering system in Neurospora crassa Artificial recruitment of the H3K9 met
87 nted these issues in the microbial eukaryote Neurospora crassa by using a "reverse-ecology" populatio
88 obium aromaticivorans oxygenase 2 (NOV2) and Neurospora crassa carotenoid oxygenase 1 (CAO1), using p
91 present a comprehensive dynamic model of the Neurospora crassa circadian clock that incorporates its
97 s studies showed that one of these proteins, Neurospora crassa CYT-18, binds group I introns by using
99 sfolded group I intron ribozyme by CYT-19, a Neurospora crassa DEAD-box protein that functions as a g
103 -cell communication and fusion in the fungus Neurospora crassa Genetically identical germinating spor
104 Prior to initiation of this project, the Neurospora crassa genome assembly contained only 3 of th
110 ental mechanisms in Aspergillus nidulans and Neurospora crassa have been intensively studied, leading
111 e control and function of DNA methylation in Neurospora crassa have led to a greater understanding of
113 ccharomyces pombe and the filamentous fungus Neurospora crassa have served as important model systems
114 and disiRNA locus DNA methylation (DLDM) in Neurospora crassa Here we show that the conserved exonuc
115 We used time-lapse live-cell imaging of Neurospora crassa in microfluidic environments to show h
116 n X-ray crystal structures of an enzyme from Neurospora crassa in the resting state and of a copper(I
121 at heterochromatin in the filamentous fungus Neurospora crassa is marked by cytosine methylation dire
122 n transcription/translation feedback loop in Neurospora crassa is the protein FREQUENCY (FRQ), shown
126 studies on the Schizosaccharomyces pombe and Neurospora crassa Nbp2p orthologues and the high conserv
127 ning sensors, such as BarA and TorS; and the Neurospora crassa Nik-1 (Os-1) sensor that contains a ta
129 agnets are small modules engineered from the Neurospora crassa photoreceptor Vivid by orthogonalizing
132 h the previously determined apo structure of Neurospora crassa QDE2 revealed that the PIWI domain has
133 ted asexual spores in the filamentous fungus Neurospora crassa rcd-1 alleles are highly polymorphic a
134 We show that the model cellulolytic fungus Neurospora crassa relies on a high-affinity cellodextrin
136 analysis of how the model filamentous fungus Neurospora crassa responds to the three main cell wall p
137 estigating the introns of the model organism Neurospora crassa revealed a different organization at t
139 cell extracts derived from MacroD-deficient Neurospora crassa strain exhibit a major reduction in th
140 e polymorphisms (SNPs) between the reference Neurospora crassa strain Oak Ridge and the Mauriceville
141 implement our algorithm on a real dataset of Neurospora crassa strains, using the genetic and geograp
142 th an MTS derived from S. cerevisiae OXA1 or Neurospora crassa SU9, both coding for hydrophobic mitoc
143 n Mss116 and the related protein Cyt-19 from Neurospora crassa suggest that these proteins form a sub
145 ral potential new PMO families in the fungus Neurospora crassa that are likely to be active on novel
146 me-mediated TER 3'-end cleavage mechanism in Neurospora crassa that is distinct from that found speci
147 critical component of the circadian clock of Neurospora crassa that regulates the abundance of its co
148 (Hi-C) with wild-type and mutant strains of Neurospora crassa to gain insight into the role of heter
149 therefore used the model filamentous fungus Neurospora crassa to search for uncharacterized transcri
150 uction of the NPS6 ortholog from the saprobe Neurospora crassa to the Deltanps6 strain of C. heterost
156 In this research, the urease-positive fungus Neurospora crassa was investigated for the biomineraliza
157 a conserved glucose homeostatic process, in Neurospora crassa We find that glycogen synthase (gsn) m
158 of the clock in the circadian model organism Neurospora crassa We show that, in a ras2-deficient stra
160 lopsis (formerly Mortierella) ramanniana and Neurospora crassa were introduced into maize using an em
161 eacetylase 1 (HDA1) mutant (hda-1) strain of Neurospora crassa with inactivated histone deacetylase 1
162 laser scanning microscopy that a LPMO (from Neurospora crassa) introduces carboxyl groups primarily
163 was initially inoculated with the mycelium (Neurospora crassa), and following the initial incubation
165 In contrast, the histone modifications in Neurospora crassa, a convenient model organism for multi
166 cell communication in the filamentous fungus Neurospora crassa, a simple and experimentally amenable
169 e TPP riboswitches in the filamentous fungus Neurospora crassa, and found that one activates and two
172 lamentous fungi, such as the model eukaryote Neurospora crassa, but is absent from the genomes of bak
173 re essential for light-mediated responses in Neurospora crassa, but the molecular mechanisms underlyi
176 dehydrogenase (CDH) isolated from the fungi Neurospora crassa, Corynascus thermophilus, and Myriococ
177 of a Moco-free eukaryotic NR from the fungus Neurospora crassa, documenting that Moco is necessary an
178 Zymoseptoria tritici, Magnaporthe oryzae and Neurospora crassa, exhibited PAMP activity, inducing cel
179 tein purified from one of its natural hosts, Neurospora crassa, exists in a multimeric form and has t
182 an RdRP component of the quelling pathway in Neurospora crassa, have rapidly diverged in evolution at
184 ng a genetic screen of the ascomycete fungus Neurospora crassa, in which dynein is nonessential.
186 that PERIOD-4 (PRD-4), the CHK-2 ortholog of Neurospora crassa, is part of a signaling pathway that i
188 4-oxidizing family AA9 LPMOs from the fungus Neurospora crassa, NcLPMO9A (NCU02240), NcLPMO9C (NCU029
193 on initiation factor, is clock controlled in Neurospora crassa, peaking during the subjective day.
194 FEX KOs in three eukaryotic model organisms, Neurospora crassa, Saccharomyces cerevisiae, and Candida
196 lletotrichum graminicola, the model organism Neurospora crassa, the human pathogen Sporothrix schenck
201 acultative and constitutive heterochromatin, Neurospora crassa, to explore possible interactions betw
202 During meiosis in the filamentous fungus Neurospora crassa, unpaired genes are identified and sil
206 tween H3S10p, H3K9me, and DNA methylation in Neurospora crassa, we built and tested mutants of the pu
207 rward genetic approach in the model organism Neurospora crassa, we identified two alleles of a gene,
208 lear movement in the model ascomycete fungus Neurospora crassa, we show that genetic diversity is mai
209 y are acutely active in the meiotic cells of Neurospora crassa, where they evaluate the mutual identi
211 g regulation by a fungal TPP riboswitch from Neurospora crassa, which is mostly located in a large in
212 in single cells of the model fungal system, Neurospora crassa, with droplet microfluidics and the us
213 i in general other than the model ascomycete Neurospora crassa--has been neglected, leaving this type
214 haromyces pombe, and one filamentous fungus, Neurospora crassa-three species that arguably are not re
237 immunoprecipitation (Co-IP) experiments, the Neurospora DNA methyltransferase DIM-2 was found in a co
239 n oscillators in model systems as diverse as Neurospora, Drosophila, and mammalian cells is thought t
242 ic expression and the proper function of the Neurospora FREQUENCY (FRQ) protein are essential for cir
243 h et al. demonstrate that phosphorylation of Neurospora FRQ induces a conformational change, which ca
246 defective-2 interacting protein (qip(+)), a Neurospora gene whose function is essential to silencing
248 B and at 11 lysines in hda-1 H2B, suggesting Neurospora H2B is a complex combination of different ace
252 typically independent of DNA methylation in Neurospora, instances of DNA methylation-dependent H3K9m
253 The predicted branch point sequences of Neurospora introns are much closer to the 3' splice site
260 w that deletion of CTK complex components in Neurospora led to high CAT-3 expression level and resist
266 e make use of yeast recombinational cloning, Neurospora mutant strains deficient in nonhomologous end
267 on in the ras-1(bd) mutant suggests that the Neurospora photoreceptor WHITE COLLAR-1 is a target of R
270 for H3K27me3, whereas the fourth component, Neurospora protein 55 (an N. crassa homolog of p55/RbAp4
273 q) identified circadianly expressed genes in Neurospora, revealing that from approximately 10% to as
276 tides long (several nucleotides shorter than Neurospora siRNAs), with a strong preference for uridine
280 omic data sets of the filamentous ascomycete Neurospora tetrasperma, a fungus that lacks recombinatio
285 Here, we show that in the filamentous fungus Neurospora, the Argonaute homolog QDE-2 and its slicer f
294 most essential light signaling components in Neurospora, VVD and WCC, illuminating a previously uncha
295 ccharomyces and the model filamentous fungus Neurospora, we examine intrinsic restraints on recombina
298 is study, by using purified FRQ protein from Neurospora, we identified 43 in vivo FRQ phosphorylation
299 ock-controlled genes (ccgs) was pioneered in Neurospora where circadian output begins with binding of
300 hylation and acetylation of core histones in Neurospora, which should serve as a foundation for futur