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1                       A commensal bacterium, Paracoccus aminovorans, was previously identified in hig
2 wever, in species of Pseudomonas, Rhizobium, Paracoccus and Legionella, mutations in ccm genes result
3 enanthrene, and of the genera Aquabacterium, Paracoccus and Polymorphobacter to degrade a hydrocarbon
4 cloned vbs genes, plus rpoI, to Rhodobacter, Paracoccus and Sinorhizobium conferred the ability to ma
5                                  None of the Paracoccus control strains hybridized at >54% with any o
6  state of cytochrome c550 for its binding to Paracoccus cytochrome c peroxidase and its delivery of t
7 icans can accommodate horse cytochrome c and Paracoccus cytochrome c(550) at different sites on its m
8  pH 6.0, I = 0.026) but only one molecule of Paracoccus cytochrome c-550 with a K(d) of 2.8 microM, m
9              For both horse cytochrome c and Paracoccus cytochrome c-550, the binding is endothermic
10 on (PDB code 1occ) and of the soil bacterium Paracoccus denitrificans (1arl) include a dicopper cente
11                              The enzyme from Paracoccus denitrificans (NorBC) contains two subunits;
12 igands to the native type I copper center of Paracoccus denitrificans amicyanin was replaced with the
13 g with antibodies raised against subunits of Paracoccus denitrificans and against synthetic peptides
14 l structures of the cytochrome oxidases from Paracoccus denitrificans and bovine.
15                          Cytochrome aa3 from Paracoccus denitrificans and cytochrome ba3 from Thermus
16 between the cytochrome c peroxidase (CCP) of Paracoccus denitrificans and cytochromes c.
17                  This is similar to COX from Paracoccus denitrificans and is in contrast to the bovin
18 acter sphaeroides is specifically related to Paracoccus denitrificans and Rc. gelatinosa is related t
19 t is a novel inhibitor of the F1FO-ATPase of Paracoccus denitrificans and related alpha-proteobacteri
20 lly simpler bacterial counterpart (NDH-1) in Paracoccus denitrificans and Thermus thermophilus HB-8 c
21 we develop and present the a-proteobacterium Paracoccus denitrificans as a suitable bacterial model s
22                         Control strains were Paracoccus denitrificans ATCC 17741(T), P. versutus ATCC
23 in the dimeric cytochrome bc(1) complex from Paracoccus denitrificans by characterizing the kinetics
24  previous papers, cytochrome c peroxidase of Paracoccus denitrificans can accommodate horse cytochrom
25                Cloning and sequencing of the Paracoccus denitrificans ccmG gene indicates that it cod
26                We successfully reconstituted Paracoccus denitrificans complex I into circularised nan
27         The NADH-quinone oxidoreductase from Paracoccus denitrificans consists of 14 subunits (Nqo1-1
28 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans consists of at least 14 unlike
29                                              Paracoccus denitrificans contains an unusual arrangement
30 chemical changes in the P(M) intermediate of Paracoccus denitrificans cytochrome c oxidase have been
31    The structure of the P(M) intermediate of Paracoccus denitrificans cytochrome c oxidase was invest
32 es of P(M) and F intermediates of bovine and Paracoccus denitrificans cytochrome c oxidase were inves
33                                              Paracoccus denitrificans cytochrome C550 is expressed as
34                                              Paracoccus denitrificans ETF has the identical function,
35 he three-dimensional structures of human and Paracoccus denitrificans ETFs determined by X-ray crysta
36  Our work with the model denitrifying strain Paracoccus denitrificans further shows that ligand-enhan
37 ic quinohemoprotein amine dehydrogenase from Paracoccus denitrificans has been determined at 2.05-A r
38  quinoprotein methylamine dehydrogenase from Paracoccus denitrificans has been refined at 1.75 A reso
39 ccinate:ubiquinone oxidoreductase (SQR) from Paracoccus denitrificans have been undertaken in the pur
40 residue in both Saccharomyces cerevisiae and Paracoccus denitrificans have indicated that mutations a
41 of these ligands in supporting the growth of Paracoccus denitrificans in a low-iron environment and t
42 he zinc-specific SBP AztC from the bacterium Paracoccus denitrificans in the zinc-bound and apo-state
43                               Amicyanin from Paracoccus denitrificans is a type 1 copper protein with
44 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of 14 different sub
45 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of 14 different sub
46 e- (NADH-) quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 diff
47 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 subu
48 ating NADH-quinone oxidoreductase (NDH-1) of Paracoccus denitrificans is composed of at least 14 unli
49                We demonstrate that NarK from Paracoccus denitrificans is expressed as a fusion of two
50 esidues (Trp(beta)(57) and Trp(beta)(108) in Paracoccus denitrificans MADH).
51                                              Paracoccus denitrificans methylamine dehydrogenase (MADH
52                  We demonstrated that in the Paracoccus denitrificans NDH-1 subunit, Nqo7 (ND3) direc
53 1-14, encode subunits homologous to those of Paracoccus denitrificans NDH-1, respectively, and are ar
54  Molecular properties of the NQO9 subunit of Paracoccus denitrificans NDH-1, which is predicted to co
55  reported for the homologous D477A mutant of Paracoccus denitrificans or for bovine COX (K(d) = 1-3 m
56 dicted from the known processing site of the Paracoccus denitrificans oxidase, does not produce the s
57  proteome of the soil denitrifying bacterium Paracoccus denitrificans PD1222 was analysed with nitrat
58 ification inhibition in a model denitrifier, Paracoccus denitrificans Pd1222.
59 esolution structure of the related MADH from Paracoccus denitrificans recently reported.
60                        The NO reductase from Paracoccus denitrificans reduces NO to N2O (2NO + 2H(+)
61 sis of methylamine dehydrogenase (MADH) from Paracoccus denitrificans requires four genes in addition
62 sis of methylamine dehydrogenase (MADH) from Paracoccus denitrificans requires four genes in addition
63 alculations on the cytochrome c oxidase from Paracoccus denitrificans revealed an unexpected coupling
64 he amino acid sequence of cytochrome c550 of Paracoccus denitrificans strain LMD 52.44 was determined
65  oligopeptide permease (opp) gene cluster of Paracoccus denitrificans that lacks any observable react
66                The three-dimensional fold of Paracoccus denitrificans TIR is identical to that observ
67        Threonine 244 in the alpha subunit of Paracoccus denitrificans transfer flavoprotein (ETF) lie
68  based on the biological reduction of N2O by Paracoccus denitrificans using methanol as a carbon/elec
69 of electron transfer flavoprotein (ETF) from Paracoccus denitrificans was determined and refined to a
70 of the Type I copper protein, amicyanin from Paracoccus denitrificans was determined at 1.8 A resolut
71 rystal structure of a new cluster 9 SBP from Paracoccus denitrificans we have called AztC.
72                                    Human and Paracoccus denitrificans wild-type electron transfer fla
73  of the type I copper protein amicyanin from Paracoccus denitrificans with cobalt.
74                                Expression in Paracoccus denitrificans yielded no holoprotein.
75 unction, as revealed by the structure of the Paracoccus denitrificans zeta-subunit in complex with AD
76 oxidases, the equivalent tryptophan (W121 in Paracoccus denitrificans) has been identified as the "el
77 y dependent on haem-iron as a cofactor (e.g. Paracoccus denitrificans) or a Nir that is solely depend
78 ms from methane-acclimated sludge (including Paracoccus denitrificans) to facilitate electron transfe
79 ry oxidases from Rhodobacter sphaeroides and Paracoccus denitrificans).
80 t mitochondria, Rhodobacter sphaeroides, and Paracoccus denitrificans).
81  of complex I from the alpha-proteobacterium Paracoccus denitrificans, a close relative of the mitoch
82  with structures of Rhodobacter sphaeroides, Paracoccus denitrificans, and bovine CcO derived by crys
83 ic to a bacterium related to R. sphaeroides, Paracoccus denitrificans, and is lethal to R. sphaeroide
84 e key factors in the bet-hedging strategy of Paracoccus denitrificans, and that systems scavenging NO
85 Atp11p from Candida glabrata and Atp12p from Paracoccus denitrificans, and we show that some features
86  ATP synthase from the alpha-proteobacterium Paracoccus denitrificans, inhibited by its natural regul
87 , we show that in the denitrifying bacterium Paracoccus denitrificans, NarJ serves as a chaperone for
88 dditionally conserved in Pichia pastoris and Paracoccus denitrificans, suggesting that they are funct
89                                           In Paracoccus denitrificans, the pathway-specific two-compo
90 f this putative accessory factor (AztD) from Paracoccus denitrificans, we have analyzed its transcrip
91 ria (from Bos taurus) and from the bacterium Paracoccus denitrificans, we show that four protons are
92 , also observed in cytochrome c oxidase from Paracoccus denitrificans, were similarly associated with
93 species, such as Rhodobacter sphaeroides and Paracoccus denitrificans, which contain an additional mi
94                                 In contrast, Paracoccus denitrificans, which has membrane-bond NO(3)
95 ing NADH-quinone oxidoreductase (NDH-1) from Paracoccus denitrificans, which is composed of the NQO1
96  the CuA sites in COX of bovine heart and of Paracoccus denitrificans.
97 uA center in cytochrome c oxidase (COX) from Paracoccus denitrificans.
98 o those of the native CuA center in COX from Paracoccus denitrificans.
99 this process has been studied extensively in Paracoccus denitrificans.
100 nters of nitrous oxide reductase (N2OR) from Paracoccus denitrificans.
101    Parabactin was extracted from cultures of Paracoccus denitrificans.
102 ytochromes to the cytochrome c peroxidase of Paracoccus denitrificans.
103 one production by Rhodobacter capsulatus and Paracoccus denitrificans.
104 ration during hypoxia, as does the bacterium Paracoccus denitrificans.
105 ion from previous work with the oxidase from Paracoccus denitrificans.
106 anada to determine their relationship to the Paracoccus genus.
107 y reacted with a single band (11 kDa) of the Paracoccus membranes and cross-reacted with Rhodobactor
108 ubunit was not able to be extracted from the Paracoccus membranes by NaI or alkaline treatment, unlik
109 qo10 subunit could not be extracted from the Paracoccus membranes by NaI or alkaline treatment, which
110 thylamino)propyl]carbodiimide (EDC), and the Paracoccus membranes were used, and the cross-linked pro
111 results were the same as those obtained with Paracoccus membranes.
112 with that of the Nqo10 subunit in the native Paracoccus membranes.
113 t reacted with a single band (15 kDa) of the Paracoccus membranes.
114 sistent with that of the NQO7 subunit in the Paracoccus membranes.
115 in SY is phylogenetically closely related to Paracoccus niistensis with a 16S rRNA gene similarity of
116                 The C-terminal region of the Paracoccus Nqo11 is exposed to the cytoplasmic phase.
117 the C-terminal 12 amino acid residues of the Paracoccus Nqo11 subunit (Nqo11c) has been raised.
118  In this report, the characterization of the Paracoccus Nqo11 subunit has been investigated.
119          For further characterization of the Paracoccus Nqo11 subunit, the subunit was overexpressed
120                    The data suggest that the Paracoccus NQO7 subunit contains three transmembrane seg
121 modification techniques, the topology of the Paracoccus NQO7 subunit in the membranes has been examin
122  the soil were closely related to the genera Paracoccus of alpha-Proteobacteria.
123                                              Paracoccus pantotrophus can express a periplasmic nitrat
124 ratory reduction of nitrate to dinitrogen in Paracoccus pantotrophus is catalyzed by the quinol-nitra
125 erize a sirohydrochlorin-ferrochelatase from Paracoccus pantotrophus that catalyses the last step of
126 embrane-bound nitrate reductase (narGHJI) in Paracoccus pantotrophus there is a fusion of two genes,
127  single site on cytochrome c peroxidase from Paracoccus pantotrophus with a K(d) of 16.4 microM at 25
128 from a variety of proteobacteria, especially Paracoccus pantotrophus.
129 ertain bacterial species from genera such as Paracoccus, Pseudomonas, and Alcaligenes have evolved to
130 xican homes was enriched with Alishewanella, Paracoccus, Rheinheimera genera and Intrasporangiaceae f
131                     We show that DMFase from Paracoccus sp. strain DMF is a halophilic and thermostab
132                            Here we show that Paracoccus sp. SY oxidizes methylarsenite.
133 laced the EO-2 cluster in close proximity to Paracoccus species (95 to 97% similarity).
134 ide direct evidence for As(III) oxidation by Paracoccus species and suggest that these species may pl
135  results indicate that EO-2 represents a new Paracoccus species, the first isolated from human clinic
136 ars to be distinct from but related to other Paracoccus species.
137                                 Furthermore, Paracoccus subunits Nqo3, Nqo6, and Nqo7 were heterologo
138  metal in P. denitrificans amicyanin than in Paracoccus versutus amicyanin.
139 m the P. laminosum plastocyanin gene and the Paracoccus versutus cytochrome c-550 gene), much higher
140                               A new species, Paracoccus yeeii, is proposed for the EO-2 strains.
141 ltage-dependent Na(+) channels (Na(V)PZ from Paracoccus zeaxanthinifaciens and Na(V)SP from Silicibac

 
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