ライフサイエンスコーパス: Pyrococcus

1 erium tuberculosis and from three species of Pyrococcus.

2 NAD+ ligases in two Thermococcus species and Pyrococcus abyssi and an ATP/ADP ligase in Aeropyrum per

3 S elements were identified in the genomes of Pyrococcus abyssi and Pyrococcus horikoshii.

4 neutral sodium/proton antiporter PaNhaP from Pyrococcus abyssi at 3.2 A, and have determined its stru

5 errupts the DNA polymerase II DP2 subunit in Pyrococcus abyssi can be overexpressed and purified as a

6 errupts the DNA polymerase II DP2 subunit in Pyrococcus abyssi can be overexpressed in Escherichia co

7 from the deep sea hyperthermophilic archaeon Pyrococcus abyssi demonstrate the existence of carbamoyl

8 structure of the archaeal MCM helicase from Pyrococcus abyssi in its single octameric ring assembly.

9 Pyrococcus abyssi NucS is the founding member of a new f

10 precursor composed of the hyperthermophilic Pyrococcus abyssi PolII intein and extein.

11 tion NMR structures of the hyperthermophilic Pyrococcus abyssi PolII intein, which has a noncanonical

12 structures of the zymogens of two of these (Pyrococcus abyssi proabylysin and Methanocaldococcus jan

13 udy of the PaNhaP Na(+)/H(+) antiporter from Pyrococcus abyssi reconstituted into liposomes.

14 transfer RNA synthetase from the thermophile Pyrococcus abyssi that forms complementary van der Waals

15 fide origin of replication was reported was Pyrococcus abyssi, where a single origin was identified.

16 rupting the DNA polymerase II DP2 subunit in Pyrococcus abyssi, which has a C-terminal glutamine, is

17 Fractionation experiments in Pyrococcus and Halobacterium cells revealed that, in viv

18 of two organisms corresponding to the genus Pyrococcus and three groups corresponding to the genus T

19 oncluded that the structural alternations in Pyrococcus Fd relative to other hyperthermostable Fds ar

20 n with protein disulfide oxidoreductase from Pyrococcus furiosis, we describe a new class of protein

21 of RPP21 from the hyperthermophilic archaeon Pyrococcus furiosus ( Pfu) using conventional and parama

22 ophilum (optimal growth at 55 degrees C) and Pyrococcus furiosus (100 degrees C) are homo-dimeric enz

23 s) that have been annotated in the genome of Pyrococcus furiosus (optimal growth temperature, 100 deg

24 cluster in the D14C variant ferredoxin from Pyrococcus furiosus (Pf D14C Fd).

25 of the rubredoxins from the hyperthermophile Pyrococcus furiosus (Pf) and the mesophile Clostridium p

26 s of Rds from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) and the mesophilic bacterium Cl

27 se (POR) from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) catalyzes the final oxidative s

28 xin (Fd) from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) have been characterized by (1)H

29 xin (Fd) from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) possesses several unique proper

30 distance to the [Fe(SCys)(4)] center in the Pyrococcus furiosus (Pf) Rd crystal structure compared t

31 Amide exchange rates were measured for Pyrococcus furiosus (Pf) rubredoxin substituted with eit

32 ter of the hyperthermophilic marine archaea, Pyrococcus furiosus (Pf), we have determined the locatio

33 in reduced and oxidized rubredoxin (Rd) from Pyrococcus furiosus (Pf).

34 The Argonaute of the archaeon Pyrococcus furiosus (PfAgo) belongs to a different branc

35 ferritin from the hyperthemophilic bacterium Pyrococcus furiosus (PfFt), have been used as models for

36 nding studies with a mutant of ferritin from Pyrococcus furiosus (PfFtn) in which self-assembly was a

37 crystal structure of a MATE transporter from Pyrococcus furiosus (PfMATE) in the long-sought-after in

38 ent MATE from the hyperthermophilic archaeon Pyrococcus furiosus (PfMATE).

39 cMetAP-I) and the hyperthermophilic archaeon Pyrococcus furiosus (PfMetAP-II) was investigated.

40 coli (EcMetAP-I) and the type II MetAP from Pyrococcus furiosus (PfMetAP-II).

41 eptidase from the hyperthermophilic archaeon Pyrococcus furiosus (PfMetAP-II; EC 3.4.11.18) has been

42 structures of apo- and holorubredoxins from Pyrococcus furiosus (PfRd) and Clostridium pasteurianum

43 rks in rubredoxins from the hyperthermophile Pyrococcus furiosus (PfRd), and its mesophilic analogue

44 luble [NiFe]-hydrogenase: hydrogenase I from Pyrococcus furiosus (PfSHI), which grows optimally near

45 the beta-subunit of tryptophan synthase from Pyrococcus furiosus (PfTrpB).

46 allosteric regulation existing in TrpS from Pyrococcus furiosus (PfTrpS), and how the allosteric con

47 he thermostable family B DNA polymerase from Pyrococcus furiosus (Pfu Pol) contains sensitive determi

48 on the POP of the hyperthermophilic archaeon Pyrococcus furiosus (Pfu) 85 degrees C in both H(2)O and

49 P holoenzyme from the thermophilic archaeon Pyrococcus furiosus (Pfu) and furthered our understandin

50 ities associated with Type III-B immunity in Pyrococcus furiosus (Pfu) are regulated by target RNA fe

51 f-replication (CSR), we evolved a version of Pyrococcus furiosus (Pfu) DNA polymerase that tolerates

52 Pyrococcus furiosus (Pfu) harbors three CRISPR-Cas immun

53 ng strategy to pinpoint the binding sites of Pyrococcus furiosus (Pfu) L7Ae on its cognate RNase P RN

54 ronounced unwinding of primer-templates with Pyrococcus furiosus (Pfu) polymerase-DNA complexes conta

55 We investigated Pyrococcus furiosus (Pfu) RNase P, an archaeal RNP that

56 urthermore, an N-terminal deletion mutant of Pyrococcus furiosus (Pfu) RPP29 that is defective in ass

57 ered a thermostable enzyme from the archaeon Pyrococcus furiosus (Pfu), which increases yields of PCR

58 mutants of the family B DNA polymerase from Pyrococcus furiosus (Pfu-Pol), with superb performance i

59 A maltodextrin-binding protein from Pyrococcus furiosus (PfuMBP) has been overproduced in Es

60 maltose binding protein from the thermophile Pyrococcus furiosus (PfuMBP).

61 ics of rubredoxins from the hyperthermophile Pyrococcus furiosus (RdPf) and the mesophile Clostridium

62 he small iron-sulfur protein rubredoxin from Pyrococcus furiosus (RdPf) at pH 2.

63 (Topt = 37 degrees C) and hyperthermophilic Pyrococcus furiosus (Topt = 95 degrees C) were recorded

64 e we show that purified Mre11 and Rad50 from Pyrococcus furiosus act cooperatively with HerA and NurA

65 cer integration in vitro using proteins from Pyrococcus furiosus and demonstrate that Cas1 and Cas2 a

66 50 homologues from the thermophilic archaeon Pyrococcus furiosus and demonstrate that the two protein

67 and human clamp loaders, and the two protein Pyrococcus furiosus and Methanobacterium thermoautotroph

68 Divergence of the hyperthermophilic Archaea, Pyrococcus furiosus and Pyrococcus horikoshii, was asses

69 Pyrococcus furiosus and Pyrococcus woesei grow optimally

70 mate dehydrogenase from the hyperthermophile Pyrococcus furiosus and the comparison of this structure

71 bredoxin from the hyperthermophilic archaeon Pyrococcus furiosus and the mesophilic bacterium Clostri

72 te dehydrogenases from the hyperthermophiles Pyrococcus furiosus and Thermococcus litoralis whose opt

73 In the Euryarchaeota species Pyrococcus furiosus and Thermococcus litoralis, phosphog

74 egion between two hyperthermophilic Archaea, Pyrococcus furiosus and Thermococcus litoralis.

75 have applied directed evolution to TrpB from Pyrococcus furiosus and Thermotoga maritima to generate

76 cale applications on Caenorhabditis elegans, Pyrococcus furiosus and three cyanobacterial genomes are

77 se and two proteins of unknown function from Pyrococcus furiosus and Vibrio parahaemolyticus.

78 cryoEM), we have solved the structure of the Pyrococcus furiosus archaellum filament at 4.2 A resolut

79 Pyrococcus horikoshii (PH1704) and PfpI from Pyrococcus furiosus are members of a class of intracellu

80 We use Pyrococcus furiosus Argonaute to punch files into the PC

81 stal structure of the Argonaute protein from Pyrococcus furiosus at 2.25 angstrom resolution.

82 protein-translocating channel SecYEbeta from Pyrococcus furiosus at 3.1-A resolution suggests a mecha

83 ulfolobus solfataricus N-terminal domain and Pyrococcus furiosus ATPase domain.

84 protein from the hyperthermophilic archaeon Pyrococcus furiosus belongs to the Lrp/AsnC family of tr

85 l activator, PF1088, which was identified in Pyrococcus furiosus by a bioinformatic approach.

86 systems, Cmr eliminates plasmid invaders in Pyrococcus furiosus by a mechanism that depends on trans

87 l extracts of the hyperthermophilic archaeon Pyrococcus furiosus by its ability to hydrolyze N-acetyl

88 the proteolytic, hyperthermophilic archaeon Pyrococcus furiosus by multistep chromatography.

89 dase A, but instead resembles neurolysin and Pyrococcus furiosus carboxypeptidase--zinc metallopeptid

90 Here we identified Pyrococcus furiosus Cas6 as a novel endoribonuclease tha

91 CESI-top-down MS analysis of Pyrococcus furiosus cell lysate identified 134 proteins

92 Using reconstituted Pyrococcus furiosus Cmr complexes, we found that each of

93 from cells of the hyperthermophilic archaeon Pyrococcus furiosus contain high hydrogenase activity (9

94 the proteolytic, hyperthermophilic archaeon Pyrococcus furiosus contain high specific activity (11 U

95 annotation of the hyperthermophilic archaeon Pyrococcus furiosus contained 2,065 open reading frames

96 The fermentative hyperthermophile Pyrococcus furiosus contains an NADPH-utilizing, heterot

97 The thermostable DNA polymerase derived from Pyrococcus furiosus designated Pfu has the highest fidel

98 The metal-ion-dependent enzyme from Pyrococcus furiosus DSM 3638 showed a relatively high de

99 icus P2), and an anaerobic hyperthermophile (Pyrococcus furiosus DSM 3638).

100 The genome of the hyperthermophile archaeon Pyrococcus furiosus encodes two transcription factor B (

101 information has been available only for the Pyrococcus furiosus enzyme (PfMre11), the conserved and

102 se extensions of stabilizing interactions in Pyrococcus furiosus Fd, however, lead to strong destabil

103 The crystal structure of Pyrococcus furiosus FEN-1, active-site metal ions, and m

104 Pyrococcus furiosus ferredoxin (Fd) contains a single [F

105 ication of species formed in the reaction of Pyrococcus furiosus ferredoxin D14C with nitric oxide.

106 the nature of the residue at position 14 in Pyrococcus furiosus ferredoxin is an important determina

107 e conformationally dynamically heterogeneous Pyrococcus furiosus ferredoxin with an intact disulfide

108 Interestingly, the sFlaF and sFlaG of Pyrococcus furiosus form a globular complex, whereas sFl

109 The hyperthermophilic archaeon Pyrococcus furiosus genome encodes three proteasome comp

110 in the AT-rich Methanococcus jannaschii and Pyrococcus furiosus genomes efficiently detects both kno

111 The anaerobic archaeon Pyrococcus furiosus grows by fermenting carbohydrates pr

112 The hyperthermophilic archaeon Pyrococcus furiosus grows optimally at 100 degrees C by

113 The archaeon Pyrococcus furiosus grows optimally at 100 degrees C by

114 The model archaeon Pyrococcus furiosus grows optimally near 100 degrees C o

115 Pyrococcus furiosus grows optimally near 100 degrees C u

116 ave recently shown that the hyperthermophile Pyrococcus furiosus has an extraordinarily high capacity

117 s of SOR from the hyperthermophilic archaeon Pyrococcus furiosus have been determined in the oxidized

118 of the archaeal family-B DNA polymerase from Pyrococcus furiosus have been investigated, illuminating

119 r-2 gene from the hyperthermophilic archaeon Pyrococcus furiosus having homology to bacterial and euk

120 The crystal structure of GalK from Pyrococcus furiosus in complex with MgADP and galactose

121 structure-specific 5' flap endonuclease from Pyrococcus furiosus in its complex with DNA.

122 determined the crystal structure of PGI from Pyrococcus furiosus in native form and in complex with t

123 Pyrococcus furiosus is a hyperthermophilic archaeon that

124 Pyrococcus furiosus is a hyperthermophilic archaeon whic

125 rredoxin from the hyperthermophilic archaeon Pyrococcus furiosus is a monomeric protein (7.5 kDa) tha

126 The archaeon Pyrococcus furiosus is a strictly anaerobic heterotroph

127 nase (SHI) of the hyperthermophilic archaeon Pyrococcus furiosus is an NADP(H)-dependent heterotetram

128 Rubredoxin from the hyperthermophile Pyrococcus furiosus is the most thermostable protein cha

129 Pyrococcus furiosus LrpA forms a homodimer mainly throug

130 tors: Ptr-H10, fusing the effector domain of Pyrococcus furiosus LrpA, and Ptr-H16, fusing the P. fur

131 We determined the crystal structure of the Pyrococcus furiosus MCM N-terminal domain hexamer bound

132 in DNA double-strand break repair, we report Pyrococcus furiosus Mre11 crystal structures, revealing

133 scattering (SAXS) and crystal structures of Pyrococcus furiosus Mre11 dimers bound to DNA with mutat

134 X-ray crystallography of Pyrococcus furiosus Mre11 indicates that an analogous mu

135 Here, using Pyrococcus furiosus Mre11, we question how two Mre11 sep

136 M N-terminal domain of the archaeal organism Pyrococcus furiosus occurs specifically in the hexameric

137 2025) is highly upregulated during growth of Pyrococcus furiosus on elemental sulfur (S(0)).

138 led MATE from the hyperthermophilic archaeon Pyrococcus furiosus Pairs of spin labels monitoring the

139 Pyrococcus furiosus phosphoglucose isomerase (PfPGI) is

140 Pyrococcus furiosus phosphoglucose isomerase (PfPGI), an

141 Transcriptional and enzymatic analyses of Pyrococcus furiosus previously indicated that three prot

142 The hyperthermophilic archeon Pyrococcus furiosus produces an extracellular alpha-amyl

143 Here we design structure-based mutations in Pyrococcus furiosus Rad50 to alter protein core plastici

144 Based on the recent Pyrococcus furiosus Rad51 structure, we have used homolo

145 of operons in the hyperthermophilic archaeon Pyrococcus furiosus represents an important step to unde

146 the 2.3 A crystal structure of mre11-3 from Pyrococcus furiosus revealed an active site structure wi

147 re of the protein-protein complex comprising Pyrococcus furiosus RPP21 and RPP29.

148 on Zn(II)-, Ga(III)-, and Ge(IV)-substituted Pyrococcus furiosus rubredoxin demonstrate that the log

149 (Trp) solvation dynamics in water and in the Pyrococcus furiosus rubredoxin protein, including the na

150 static solvent-accessible amide hydrogens of Pyrococcus furiosus rubredoxin range from near the diffu

151 l-atom molecular-dynamics simulations of the Pyrococcus furiosus SecYE, which was determined to be in

152 identification and characterization of SurR, Pyrococcus furiosus sulphur (S(0)) response regulator.

153 perties of the oxidized and reduced forms of Pyrococcus furiosus superoxide reductase (SOR) as a func

154 ction at the mononuclear iron active site of Pyrococcus furiosus superoxide reductase (SOR) through t

155 he site of base exchange; truncated forms of Pyrococcus furiosus TGT retain their specificity for gua

156 ed a gene from the archaeal hyperthermophile Pyrococcus furiosus that reduces O(2)(-).

157 n initiation complexes have been formed with Pyrococcus furiosus transcription factors (TBP and TFB1)

158 cations with larger quantities (100 ng) of a Pyrococcus furiosus tryptic digest, but with mass-limite

159 The hyperthermophilic archaeon Pyrococcus furiosus uses carbohydrates as a carbon sourc

160 eductase from the hyperthermophilic anaerobe Pyrococcus furiosus uses electrons from reduced nicotina

161 r E17 to Q in the soluble hydrogenase I from Pyrococcus furiosus using site directed mutagenesis.

162 Pyrococcus furiosus utilizes starch and its degradation

163 n from the hyperthermophilic archaebacterium Pyrococcus furiosus was examined by a hydrogen exchange

164 cosidase from the hyperthermophilic archaeon Pyrococcus furiosus was recombinantly produced in Escher

165 ock protein (sHSP) from the hyperthermophile Pyrococcus furiosus was specifically induced at the leve

166 l-II family DNA polymerase from the archaeon Pyrococcus furiosus with the aim of improving ddNTP util

167 f the type-I (Escherichia coli) and type-II (Pyrococcus furiosus) MetAPs in the presence of the react

168 ironment, such as hyperthermophilic archaea (Pyrococcus furiosus), are significantly more compact and

169 lloproteins from an exemplary microorganism (Pyrococcus furiosus).

170 e archaeal transcriptional regulator SurR of Pyrococcus furiosus, a hyperthermophilic anaerobe.

171 We have microinjected Box C/D RNAs from Pyrococcus furiosus, a hyperthermophilic archaeon, into

172 found that the hyperthermophilic archaeaon, Pyrococcus furiosus, actively incorporates DNA fragments

173 This is not the case with Pyrococcus furiosus, an archaeon that grows optimally ne

174 urified from the hyperthermophilic archaeon, Pyrococcus furiosus, an organism that grows optimally at

175 l element for the hyperthermophilic archaeon Pyrococcus furiosus, and many of its iron-containing enz

176 hia coli, Artemisia tridentata (sage brush), Pyrococcus furiosus, and Methanobacter thermautotrophicu

177 he metabolite was isolated from the organism Pyrococcus furiosus, and structurally characterized thro

178 ation cofactor, S-adenosyl-L-methionine from Pyrococcus furiosus, at 2.7 A.

179 (7.5 kDa) of the hyperthermophilic archaeon, Pyrococcus furiosus, contains a single [4Fe-4S]1+,2+ clu

180 PF0610, a protein from the hyperthermophile Pyrococcus furiosus, has homologues only in other archae

181 protein from the hyperthermophilic archaeon Pyrococcus furiosus, have been determined in the native

182 irst characterized from the hyperthermophile Pyrococcus furiosus, it is unique to the archaeal order

183 hermus thermophilus, Archaeoglobus fulgidus, Pyrococcus furiosus, Methanococcus jannaschii, and Metha

184 x cleaves an endogenous complementary RNA in Pyrococcus furiosus, providing direct in vivo evidence o

185 In Pyrococcus furiosus, psiRNAs occur in two size forms tha

186 obus fulgidus, Methanococcus jannaschii, and Pyrococcus furiosus, respectively.

187 gen exchange results for the rubredoxin from Pyrococcus furiosus, the acidity of these amides was cal

188 etAP from E. coli and the type-II MetAP from Pyrococcus furiosus, the type-I MetAP can be selectively

189 the N-terminal DNA binding domain of Phr of Pyrococcus furiosus, these results suggest that HSR1 and

190 cted 50 representative proteins, mostly from Pyrococcus furiosus, to this pipeline and found that 30

191 lucanase from the hyperthermophilic archaeon Pyrococcus furiosus, was cloned and expressed in Escheri

192 The hyperthermophilic archaeon, Pyrococcus furiosus, was grown on maltose near its optim

193 Herein, the model hyperthermophile, Pyrococcus furiosus, which grows optimally near 100 degr

194 hat confers on a microorganism (the archaeon Pyrococcus furiosus, which grows optimally on carbohydra

195 ned the structures of a PurP orthologue from Pyrococcus furiosus, which is functionally unclassified,

196 amily B DNA polymerases from archaea such as Pyrococcus furiosus, which live at temperatures approxim

197 tryptophan synthase beta-subunit (TrpB) from Pyrococcus furiosus, which mimics the activation afforde

198 gineered subunit of tryptophan synthase from Pyrococcus furiosus, yielding (2S,3S)-beta-methyltryptop

199 ssed, using the family-B DNA polymerase from Pyrococcus furiosus.

200 -keto reductase activity native to AdhD from Pyrococcus furiosus.

201 und low-spin FeIII forms of the 1Fe SOR from Pyrococcus furiosus.

202 (NfnI) from the hyperthermophillic archaeon Pyrococcus furiosus.

203 sing the thermostable protease isolated from Pyrococcus furiosus.

204 nditions from the hyperthermophilic archaeon Pyrococcus furiosus.

205 NA circles in the hyperthermophilic archaeon Pyrococcus furiosus.

206 ucture of the full-length RAD51 homolog from Pyrococcus furiosus.

207 nosine, from the hyperthermophilic archaeon, Pyrococcus furiosus.

208 purified from the hyperthermophilic archaeon Pyrococcus furiosus.

209 e from the hyperthermophilic archaebacterium Pyrococcus furiosus.

210 to 1.2 A from the hyperthermophilic archaeon Pyrococcus furiosus.

211 frame (ORFs) from the genome of the archaeon Pyrococcus furiosus.

212 P-free Rad50 catalytic domain (Rad50cd) from Pyrococcus furiosus.

213 n compared to that from the hyperthermophile Pyrococcus furiosus.

214 d a surrogate protein system using RadA from Pyrococcus furiosus.

215 ba histolytica and from the archaebacterium, Pyrococcus furiosus.

216 utagenesis in the hyperthermophilic archaeon Pyrococcus furiosus.

217 sing Bacillus subtilis, Escherichia coli and Pyrococcus furiosus.

218 purified from the hyperthermophilic archaeon Pyrococcus furiosus.

219 lfovibrio gigas, Desulfovibrio vulgaris, and Pyrococcus furiosus.

220 ere we show that primed adaptation occurs in Pyrococcus furiosus.

221 cohol dehydrogenase (AdhA) into the archaeon Pyrococcus furiosus.

222 ss spectrometer to profile the proteome from Pyrococcus furiosus.

223 bus solfataricus, Sulfolobus islandicus, and Pyrococcus furiosus.

224 to those of V-type ATPases, namely that from Pyrococcus furiosus.

225 hyperthermophiles Pyrococcus horikoshii and Pyrococcus furiosus; however, the form(s) of sulfur that

226 uated using a preliminary set of orthologous Pyrococcus gene pairs, for which it demonstrates an impr

227 genic-sequence content of the three archaeal Pyrococcus genomes to determine the most highly related

228 Six allelic intein sites are common to both Pyrococcus genomes, and two intein insertions occur in e

229 py on the bacterial transporter Glt(Ph) from Pyrococcus horikoshi to examine conformational changes i

230 of comparing domain graphs of two organisms, Pyrococcus horikoshii (an extremophile) and Haemophilus

231 resolution structure of the transporter from Pyrococcus horikoshii (Glt(Ph)) in steered molecular dyn

232 The aspartate transporter from Pyrococcus horikoshii (GltPh) is a model for the structu

233 Our laboratory has recently showed that in Pyrococcus horikoshii (P. horikoshii), the first step us

234 The intracellular protease from Pyrococcus horikoshii (PH1704) and PfpI from Pyrococcus

235 eric serine protease, an oligopeptidase from Pyrococcus horikoshii (PhAAP), revealing a complex, self

236 Herein, we present a structure of NadA from Pyrococcus horikoshii (PhNadA) in complex with IA and sh

237 etrahedrons are addressed by using TET2 from Pyrococcus horikoshii (PhTET2) as a model.

238 structures of NikR from Escherichia coli and Pyrococcus horikoshii .

239 the crystal structure of the gene product of Pyrococcus horikoshii 999 (PH999), a PZAase, and its com

240 th a recent crystal structure of the related Pyrococcus horikoshii A-ATPase E subunit.

241 schii, Methanobacterium thermoautotrophicum, Pyrococcus horikoshii and Archaeoglobus fulgidus.

242 studies of the archeal homologs Glt(Ph) from Pyrococcus horikoshii and Glt(Tk) from Thermococcus koda

243 sulfur-reducing anaerobic hyperthermophiles Pyrococcus horikoshii and Pyrococcus furiosus; however,

244 of the structure of l-lysine complexed with Pyrococcus horikoshii class I LysRS (LysRS1) and homolog

245 ervation between P. furiosus and the related Pyrococcus horikoshii clearly delimited the gene start i

246 as been used to kinetically characterise the Pyrococcus horikoshii DNA adenine methyltransferase.

247 ere we analyze the biochemical properties of Pyrococcus horikoshii DNA ligase.

248 Pyrococcus horikoshii Dph2 (PhDph2) is an unusual radica

249 Previous study showed that Pyrococcus horikoshii Dph2 (PhDph2), a novel iron-sulfur

250 ation by showing that Archease and RtcB from Pyrococcus horikoshii function in tandem, with Archease

251 GltPh from Pyrococcus horikoshii is a homotrimeric Na(+)-coupled as

252 ase domain of the hyperthermophilic archaeon Pyrococcus horikoshii is strongly regulated by the nativ

253 e variants were selected for analysis of the Pyrococcus horikoshii LysRS1-tRNALys docking model.

254 ning to evaluate the interaction between the Pyrococcus horikoshii Nop5p domain and an L7Ae box C/D R

255 The Pyrococcus horikoshii OT3 genome contains a gene (PH0601

256 eprogramming the anticodon-binding pocket of Pyrococcus horikoshii ProRS (PhProRS), we were able to i

257 Here, we report two crystal structures of Pyrococcus horikoshii RNA-splicing ligase RtcB in comple

258 Here, we present three structures of Pyrococcus horikoshii RtcB complexes that capture snapsh

259 reviously yielded a crystal structure of the Pyrococcus horikoshii RtcB protein containing a new prot

260 r dynamics simulations of three forms of the Pyrococcus horikoshii species of NikR including two apo-

261 glutamate transporter homologue Glt(Ph) from Pyrococcus horikoshii suggested that the slow conformati

262 of diphthamide biosynthesis in the archaeon Pyrococcus horikoshii uses a novel iron-sulphur-cluster

263 Recently, the X-ray structure of NadA from Pyrococcus horikoshii was solved to 2.0 A resolution.

264 endoglucanase EGPh from the hypothermophilic Pyrococcus horikoshii was transaminated with pyridoxal-5

265 nes from both Mycobacterium tuberculosis and Pyrococcus horikoshii were cloned, and their protein pro

266 s (Escherichia coli, Heliobacter pylori, and Pyrococcus horikoshii) of NikR reveal large conformation

267 moautotrophicum, Archaeoglobus fulgidus, and Pyrococcus horikoshii) revealed 1326 orthologous sets, o

268 archaeal species (Archaeoglobus fulgidus and Pyrococcus horikoshii).

269 on the homologous sequence from subunit B of Pyrococcus horikoshii, an organism that lacks an actin c

270 n acceptor substrates from Escherichia coli, Pyrococcus horikoshii, and Homo sapiens.

271 nt of a glutamate transporter homologue from Pyrococcus horikoshii, Glt(Ph), which is trapped in the

272 mate transporter homologue from the archaeon Pyrococcus horikoshii, GltPh, showed that distinct trans

273 h, a homotrimeric aspartate transporter from Pyrococcus horikoshii, is an archaeal homolog of mammali

274 GltPh, an archeal EAAT homolog from Pyrococcus horikoshii, is currently the only member with

275 tem Glt(Ph), an archaeal EAAT homologue from Pyrococcus horikoshii, limited trypsin proteolysis exper

276 ate transporter homolog from archaebacterium Pyrococcus horikoshii, sodium/aspartate symporter GltPh,

277 hermophilic Archaea, Pyrococcus furiosus and Pyrococcus horikoshii, was assessed by analysis of compl

278 ed studies of the monofunctional ligase from Pyrococcus horikoshii.

279 aryotic glutamate transporter homologue from Pyrococcus horikoshii.

280 l-tRNA synthetase is from the achaebacterium Pyrococcus horikoshii.

281 fied in the genomes of Pyrococcus abyssi and Pyrococcus horikoshii.

282 Trichoderma viride, Thermogata maritima, and Pyrococcus horikoshii.

283 zyme, an endoglucanase from the thermophilic Pyrococcus horikoshii.

284 (e.g., Bacillus licheniformis TAKA-term and Pyrococcus kodakaraensis KOD1 alpha-amylases, respective

285 imately twice as much tRNA as did AspRS from Pyrococcus kodakaraensis or Ferroplasma acidarmanus.

286 In contrast, Asp-tRNA formed by the Pyrococcus or Ferroplasma enzymes was not a substrate fo

287 ADR is not essential for S(0) respiration in Pyrococcus or Thermococcus but appears to participate in

288 duplication preceding the divergence of the Pyrococcus species.

289 cognition of U35 and U36 was confined to the pyrococcus-spirochete grouping within the archaeal branc

290 [encoding O-acetylserine (thiol)-lyase-B] in Pyrococcus spp., Sulfolobus solfataricus, and Thermoplas

291 yperthermophiles Methanothermus fervidus and Pyrococcus strain GB-3a) have been determined by circula

292 ervidus; and hPyA1 from the hyperthermophile Pyrococcus strain GB-3a.

293 el (1.7%) of aspartylation of unfractionated Pyrococcus tRNA compared with that achieved by the wild-

294 Pyrococcus woesei (Pw) is a hyperthermophilic archaeal o

295 n of the TATA box binding protein (TBP) from Pyrococcus woesei (Pw) with an oligonucleotide containin

296 pendage combination used the polymerase from Pyrococcus woesei (Pwo) and the 5'-tBu-SS-CH2-CH2-C [tri

297 from the thermophilic and halophilic archaea Pyrococcus woesei (PwTBP) with an oligonucleotide contai

298 Pyrococcus furiosus and Pyrococcus woesei grow optimally at temperatures near 10

299 from the halophile/hyperthermophile organism Pyrococcus woesei, is adapted to high concentrations of

300 a DNA target, all from the hyperthermophile Pyrococcus woesei.