ライフサイエンスコーパス: Sulfolobus solfataricus

1 it named PriX was identified in the archaeon Sulfolobus solfataricus.

2 ipaludis, Methanocaldococcus jannaschii, and Sulfolobus solfataricus.

3 ns-lesion (Y-class) DNA polymerase Dpo4 from Sulfolobus solfataricus.

4 imeric MCM of the hyperthermophilic archaeon Sulfolobus solfataricus.

5 is by a model Y family polymerase, Dpo4 from Sulfolobus solfataricus.

6 protein from the thermoacidophilic archaeon Sulfolobus solfataricus.

7 neralized transcription in the crenarchaeote Sulfolobus solfataricus.

8 onally related archaeal exosome complex from Sulfolobus solfataricus.

9 xidant from the hyperthermophilic acidophile Sulfolobus solfataricus.

10 -resolving enzyme; the Hje endonuclease from Sulfolobus solfataricus.

11 ion structure and properties of Sso10b2 from Sulfolobus solfataricus.

12 igh-resolution crystal structure of Hje from Sulfolobus solfataricus.

13 ermostable enzyme isolated from the archaeon Sulfolobus solfataricus.

14 regulation in the hyperthermophilic archaeon Sulfolobus solfataricus.

15 e single-stranded DNA-binding protein SSB in Sulfolobus solfataricus.

16 e primase was identified in the crenarchaeon Sulfolobus solfataricus.

17 etergent extract of the membrane fraction of Sulfolobus solfataricus.

18 ed on the use of halocin A4 preparations and Sulfolobus solfataricus.

19 erved in the hyperthermophilic crenarchaeote Sulfolobus solfataricus.

20 ation of SHMT from the thermophilic organism Sulfolobus solfataricus.

21 ed PriX, from the hyperthermophilic archaeon Sulfolobus solfataricus.

22 ubacteria, eukaryotes, and the crenarchaeote Sulfolobus solfataricus.

23 main Archaea, Methanosarcina thermophila and Sulfolobus solfataricus.

24 ered variants of cytochrome P450 CYP119 from Sulfolobus solfataricus.

25 Here, we investigated the SegAB system from Sulfolobus solfataricus.

26 ases human Pol eta and P2 Pol IV (Dpo4) from Sulfolobus solfataricus.

27 purified CRISPR-associated CMR complex from Sulfolobus solfataricus.

28 ding virus in the hyperthermophilic archaeon Sulfolobus solfataricus.

29 dic hot springs where it infects the archeon Sulfolobus solfataricus.

30 og proteins, SsoRal3, from the crenarchaeaon Sulfolobus solfataricus.

31 tro using proteins derived from the archaeon Sulfolobus solfataricus.

32 se 3, SsTop3, from the thermophilic archaeon Sulfolobus solfataricus.

33 s required for pyramid formation in its host Sulfolobus solfataricus.

34 protein from the hyperthermophilic archaeon Sulfolobus solfataricus.

35 ation of an archaeal CASCADE (aCASCADE) from Sulfolobus solfataricus.

36 ics of a model Y-family polymerase Dpo4 from Sulfolobus solfataricus.

37 ymerase (YB site) bound to PCNA and DNA from Sulfolobus solfataricus.

38 h a model Y-family DNA polymerase, Dpo4 from Sulfolobus solfataricus.

39 omologous XPB proteins from the crenarchaeon Sulfolobus solfataricus.

40 The crystal structure of Sulfolobus solfataricus 5'-deoxy-5'-methylthioadenosine

41 se was purified from culture supernatants of Sulfolobus solfataricus 98/2 during growth on starch as

42 Sulfolobus) solfataricus 98/2 revealed genes that were h

43 icative and lesion bypass DNA polymerases of Sulfolobus solfataricus, a hyperthermophilic crenarchaeo

44 efficient heterologous expression system for Sulfolobus solfataricus ADH-10 (Alcohol Dehydrogenase is

45 -3-phosphate dehydrogenase from the archaeon Sulfolobus solfataricus allows modeling of the B subunit

46 on consists of 15 genes; in the Crenarchaea, Sulfolobus solfataricus and Aeropyrum pernix, one and tw

47 The activity of ThrRS from Sulfolobus solfataricus and Halobacterium sp. NRC-1 was

48 re stability of the thermophilic CYP119 from Sulfolobus solfataricus and its active-site Thr213 and T

49 The genome of Sulfolobus solfataricus and related crenarchaea contain

50 nt of the DinB homolog (Dbh) polymerase from Sulfolobus solfataricus and show that it is nonprocessiv

51 rk, we describe the generation of strains of Sulfolobus solfataricus and Sulfolobus acidocaldarius th

52 from the hyperthermophilic archaeabacterium Sulfolobus solfataricus and Sulfolobus acidocaldarius, r

53 Sulfolobus solfataricus and the infecting virus Sulfolob

54 Rad51/RecA protein homolog from the archaeon Sulfolobus solfataricus, and show that this protein, Rad

55 Orc1-1 and Orc1-3 paralogs from the archaeon Sulfolobus solfataricus, and tested their effect on orig

56 lserine (thiol)-lyase-B] in Pyrococcus spp., Sulfolobus solfataricus, and Thermoplasma acidophilum.

57 Using Sso7d from Sulfolobus solfataricus as the DNA binding protein, we d

58 e present the crystal structure of Alba from Sulfolobus solfataricus at 2.6 A resolution (PDB code 1h

59 amily 1) from the hyperthermophilic archaeon Sulfolobus solfataricus at 2.6 A resolution.

60 crystal structure of the archaeal RNAP from Sulfolobus solfataricus at 3.4 A resolution, completing

61 nding of RuvC of Escherichia coli and Hjc of Sulfolobus solfataricus can be followed by an increase i

62 rates, whereas the Cas4 protein SSO1391 from Sulfolobus solfataricus can cleave ssDNA in both the 5'

63 IV (Dpo4), a prototype Y-family enzyme from Sulfolobus solfataricus, can bypass 8-oxoG both efficien

64 Y-family DNA polymerases, such as Dpo4 from Sulfolobus solfataricus, can traverse a wide variety of

65 Sulfolobus solfataricus contains a membrane-associated p

66 pecies complementation of a copper-sensitive Sulfolobus solfataricus copR mutant.

67 dentified splicing endonuclease homolog from Sulfolobus solfataricus, despite possessing all of the p

68 Cas1 from both Escherichia coli and Sulfolobus solfataricus display sequence specific activi

69 We have determined structures of Sulfolobus solfataricus DNA ligase and heterotrimeric PC

70 In the absence of nicked DNA, the Sulfolobus solfataricus DNA ligase has an open, extended

71 AP site bypass by two Y family TLS enzymes, Sulfolobus solfataricus DNA polymerase 4 (Dpo4) and huma

72 A similar bias is seen with Sulfolobus solfataricus DNA polymerase 4, which forms a

73 the kinetics and conformational dynamics of Sulfolobus solfataricus DNA polymerase B1 (PolB1) during

74 Previous work has shown that Sulfolobus solfataricus DNA polymerase Dpo4-catalyzed by

75 Sulfolobus solfataricus DNA polymerase IV (Dpo4) is a me

76 The human DNA polymerase kappa homolog Sulfolobus solfataricus DNA polymerase IV (Dpo4) produce

77 Steady-state kinetics with the Y-family Sulfolobus solfataricus DNA polymerase IV (Dpo4) showed

78 specifically placed dGAP lesion catalyzed by Sulfolobus solfataricus DNA polymerase IV (Dpo4), a mode

79 dducts derived from 1-NP, can be bypassed by Sulfolobus solfataricus DNA polymerase IV (Dpo4), althou

80 sequences were determined, with the Y-family Sulfolobus solfataricus DNA polymerase IV (Dpo4), at res

81 ction pathways of a Y-family DNA polymerase, Sulfolobus solfataricus DNA polymerase IV (Dpo4), for th

82 ) adduct by a model Y-family DNA polymerase, Sulfolobus solfataricus DNA polymerase IV (Dpo4).

83 ased model to explore functional dynamics in Sulfolobus solfataricus DNA Y-family polymerase IV (DPO4

84 lication, we have detected an interaction of Sulfolobus solfataricus DnaG (SsoDnaG) with the replicat

85 the catalytic efficiency of the model enzyme Sulfolobus solfataricus Dpo4 16,000-fold.

86 the structures of the model DNA polymerases Sulfolobus solfataricus Dpo4 and Bacillus stearothermoph

87 revious work with the translesion polymerase Sulfolobus solfataricus Dpo4 showed a decrease in cataly

88 In contrast to replicative DNA polymerases, Sulfolobus solfataricus Dpo4 showed a limited decrease i

89 Our previous publication shows that Sulfolobus solfataricus Dpo4 utilizes an 'induced-fit' m

90 ing situations in structures of complexes of Sulfolobus solfataricus Dpo4, a bypass pol that favors C

91 chanism for blunt-end additions catalyzed by Sulfolobus solfataricus Dpo4.

92 ings to that of a model translesion DNA pol, Sulfolobus solfataricus Dpo4.

93 The hyperthermophilic archaeon Sulfolobus solfataricus employs a catabolite repression-

94 ted that Lys-110 (numbering according to the Sulfolobus solfataricus enzyme) behaves as a general aci

95 we reveal that the highly studied PolB1 from Sulfolobus solfataricus exists as a heterotrimeric compl

96 three different operons of the crenarchaeon Sulfolobus solfataricus following UV irradiation.

97 and have applied it to Escherichia coli and Sulfolobus solfataricus for genome-wide prediction of nc

98 Here, we demonstrate that Hjc from Sulfolobus solfataricus forms a physical interaction wit

99 that the three RadA paralogs encoded by the Sulfolobus solfataricus genome are expressed under norma

100 rd of the open reading frames encoded in the Sulfolobus solfataricus genome were differentially expre

101 dentified ISs in the Sulfolobus tokodaii and Sulfolobus solfataricus genomes.

102 erent from those of the archaeal thermophile Sulfolobus solfataricus growing in the same temperature

103 The hyperthermophilic archaeon Sulfolobus solfataricus grows optimally above 80 degrees

104 Here we establish that the archaeon Sulfolobus solfataricus harbors a hybrid segrosome consi

105 The extreme acidothermophilic archaeon Sulfolobus solfataricus harbors a membrane-associated pr

106 By contrast, Sulfolobus solfataricus has a complex CRISPR-Cas system

107 The crystal structure of the apo GAPDH from Sulfolobus solfataricus has been determined by multiple

108 t the Cas4 protein SSO0001 from the archaeon Sulfolobus solfataricus has metal-dependent endonuclease

109 6 homologous proteins (MCM2-7), the archaeon Sulfolobus solfataricus has only 1 MCM protein (ssoMCM),

110 The crenarchaeon Sulfolobus solfataricus has two divergent subtypes of th

111 irst P450 identified in Archaea, CYP119 from Sulfolobus solfataricus, has been solved in two differen

112 deltaH, M. thermoautotrophicum Marburg, and Sulfolobus solfataricus, however, has been demonstrated

113 aX proteins) from Methanosarcina barkeri and Sulfolobus solfataricus hydrolyze Ser-tRNAAla and Gly-tR

114 proteins from Sulfolobus acidocaldarius and Sulfolobus solfataricus in N-terminal amino acid sequenc

115 spindle-shaped virus 1 (SSV1), which infects Sulfolobus solfataricus in volcanic hot springs at 80 de

116 undant proteins present in the crenarchaeote Sulfolobus solfataricus, including subunits of the therm

117 ation of structure in an intermediate in the Sulfolobus solfataricus indole-3-glycerol phosphate synt

118 proach to engineer the lactonase SsoPox from Sulfolobus solfataricus into a phosphotriesterase.

119 ea possess a homo-trimeric PCNA, the PCNA of Sulfolobus solfataricus is a heterotrimer.

120 The Dbh polymerase of Sulfolobus solfataricus is a member of the recently desc

121 protein from the hyperthermophilic archaeon Sulfolobus solfataricus is an attractive binding scaffol

122 by the DinB homolog (Dbh) DNA polymerase of Sulfolobus solfataricus is as stringent as in other poly

123 ory system in the hyperthermophilic archaeon Sulfolobus solfataricus is described.

124 The thermoacidophilic archaeon Sulfolobus solfataricus is known for its metabolic versa

125 polymerase Dpo4, from the archaeon bacterium Sulfolobus solfataricus, is a member of the DinB family,

126 virus that infects the hyperthermoacidophile Sulfolobus solfataricus, is one of the most well-studied

127 se (Dpo1) in the hyperthermophilic archaeon, Sulfolobus solfataricus, is shown here to possess a rema

128 The 3 million-base pair genome of Sulfolobus solfataricus likely undergoes depurination/de

129 installing subunit-subunit salt bridges from Sulfolobus solfataricus MCM into MacMCM promotes oligome

130 ation orientation of Saccharolobus (formally Sulfolobus) solfataricus MCM on DNA.

131 For example, the archaeal Sulfolobus solfataricus minichromosome maintenance (SsoM

132 The structure is a chimera of Sulfolobus solfataricus N-terminal domain and Pyrococcus

133 of a thermophilic and barophilic CYP119 from Sulfolobus solfataricus offers a new opportunity to iden

134 sm of MCM from the hyperthermophilic Archaea Sulfolobus solfataricus on various DNA substrates.

135 rate synthase from the thermophilic Archaeon Sulfolobus solfataricus (optimum growth temperature = 85

136 ide was identified from tryptic digests from Sulfolobus solfataricus P1 by liquid chromatography-tand

137 investigated the ultrastructural changes of Sulfolobus solfataricus P2 associated with infection by

138 t the Y-family DNA polymerase IV (Dpo4) from Sulfolobus solfataricus P2 can preferentially insert C o

139 alyzed by an exonuclease-deficient mutant of Sulfolobus solfataricus P2 DNA polymerase B1 (PolB1 exo-

140 Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) has

141 lysis of the products of primer extension by Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) indi

142 Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) is a

143 Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) is a

144 mechanism of DNA polymerization catalyzed by Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) is r

145 mational dynamics of the Y-family polymerase Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) usin

146 of translesion bypass of 1,N(2)-epsilondG by Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4), lea

147 The hyperthermophilic crenarchaeon Sulfolobus solfataricus P2 encodes three B-family DNA po

148 Sulfolobus solfataricus P2 is an aerobic crenarchaeon wh

149 s of the complete genome of the crenarchaeon Sulfolobus solfataricus P2 reveal that it possesses a Di

150 (EC 1.1.1.34) from the thermophilic archaeon Sulfolobus solfataricus P2 was cloned and sequenced.

151 S2), an acidophilic and aerobic thermophile (Sulfolobus solfataricus P2), and an anaerobic hypertherm

152 ase Dpo4, from the thermophilic crenarchaeon Sulfolobus solfataricus P2, offers a valuable opportunit

153 etermined the X-ray crystal structure of the Sulfolobus solfataricus PCNA1-PCNA2 heterodimer, bound t

154 onuclease and the translesion DNA polymerase Sulfolobus solfataricus pol IV were used as models to di

155 PP1/2A/2B superfamily such as PP1-arch1 from Sulfolobus solfataricus, PP1alpha from rats, PP2A from S

156 The Sulfolobus solfataricus protein acetyltransferase (PAT)

157 mparable with that reported for the archaeal Sulfolobus solfataricus Pth2 and higher than that of the

158 The Sulfolobus solfataricus Rad54 (SsoRad54) protein is a do

159 The crystal structure of Sulfolobus solfataricus RadA has been solved to a resolu

160 We find that the Sulfolobus solfataricus RadA protein binds DNA in the ab

161 , using in vitro selection, we show that the Sulfolobus solfataricus RadA protein displays the same p

162 ite of the homologous alpha-glucosidase from Sulfolobus solfataricus resulted in a shift from hydroly

163 itional microorganisms (Escherichia coli and Sulfolobus solfataricus) revealed species-specific assim

164 junction-resolving enzyme from the archaeon Sulfolobus solfataricus, reveals extensive structural ho

165 Sulfolobus solfataricus secretes an acid-resistant alpha

166 The archaeal homohexameric MCM helicase from Sulfolobus solfataricus serves as a model for understand

167 Y-Family DNA polymerase IV (Dpo4) from Sulfolobus solfataricus serves as a model system for euk

168 erol phosphate synthase from the thermophile Sulfolobus solfataricus (sIGPS) and the alpha subunit of

169 he indole-3-glycerol phosphate synthase from Sulfolobus solfataricus (sIGPS), was assessed by hydroge

170 of indole-3-glycerol phosphate synthase from Sulfolobus solfataricus (sIGPS).

171 re we have produced a fusion protein between Sulfolobus solfataricus SRP54 (Ffh) and a signal peptide

172 Sulfolobus solfataricus SSB (SsoSSB) contains a single O

173 report a role for the thermophilic archaeal Sulfolobus solfataricus SSB (SsoSSB) in the presynaptic

174 We demonstrate that Sulfolobus solfataricus SSB can melt DNA containing a mi

175 acids, as for Methanococcus jannaschii, the Sulfolobus solfataricus SSB protein (SsoSSB) has a singl

176 xy-5'-methylthioadenosine phosphorylase from Sulfolobus solfataricus (SsMTAP) has been determined alo

177 ay crystal structure of an archaeal NAT from Sulfolobus solfataricus (ssNAT).

178 The acylphosphatase from Sulfolobus solfataricus (Sso AcP) is a globular protein

179 ative-like state of the acylphosphatase from Sulfolobus solfataricus (Sso AcP).

180 ed within the hyperthermophilic crenarchaeon Sulfolobus solfataricus (Sso) and compared in vitro prim

181 major chromatin proteins, Alba and Sul7d, of Sulfolobus solfataricus (Sso) on the ability of the MCM

182 e replication DNA polymerase holoenzyme from Sulfolobus solfataricus (Sso) was investigated using pre

183 We found that KARI from archaea Sulfolobus solfataricus (Sso-KARI) is unusual in being a

184 re of Csa3, a CRISPR-associated protein from Sulfolobus solfataricus (Sso1445), which reveals a dimer

185 protein from the hyperthermophilic archaeon Sulfolobus solfataricus; Sso7d-hFc was isolated from a c

186 The primary DNA replication polymerase from Sulfolobus solfataricus (SsoDpo1) has been shown previou

187 yltransferase from the thermophilic archaeon Sulfolobus solfataricus (SsOGT).

188 ichromosomal maintenance (MCM) helicase from Sulfolobus solfataricus (SsoMCM) is a model for understa

189 me maintenance (MCM) complex of the archaeon Sulfolobus solfataricus (SsoMCM).

190 open reading frame sso2387 from the archaeon Sulfolobus solfataricus, SsoPK2, displayed several of th

191 Following infection of Sulfolobus solfataricus strain 2-2-12 with STIV, transcr

192 tinct for each strain, indicating that these Sulfolobus solfataricus strains have differential respon

193 scribed here focuses on the response of four Sulfolobus solfataricus strains to ionizing radiation (I

194 we have characterized the responses of three Sulfolobus solfataricus strains to UV-C irradiation, whi

195 nly been examined in three archaeal species: Sulfolobus solfataricus, Sulfolobus islandicus, and Pyro

196 yses also predicted that the ancestor to the Sulfolobus solfataricus-Sulfolobus islandicus clade was

197 rmined structure of a MazG-like protein from Sulfolobus solfataricus supported the unification of the

198 Sulfolobus solfataricus TFS1 functions as a bona fide cl

199 se (Hje) from the thermophilic crenarchaeote Sulfolobus solfataricus that exhibits a high degree of s

200 A-binding proteins from the hyperthermophile Sulfolobus solfataricus that has been associated with DN

201 CYP119 from Sulfolobus solfataricus, the first thermophilic cytochro

202 h the AS structure from the hyperthermophile Sulfolobus solfataricus, the S. marcescens structure sho

203 olases, including the beta-glycosidases from Sulfolobus solfataricus, Thermotoga maritima, and Caldoc

204 In Sulfolobus solfataricus, this complex is composed of sev

205 Sulfolobus solfataricus ThrRS-cat was shown to synthesiz

206 re of the SSB protein from the crenarchaeote Sulfolobus solfataricus to 1.26 A.

207 Methanococcus maripaludis tRNA2(Ile) and in Sulfolobus solfataricus total tRNA, indicating its proba

208 Previously, we demonstrated that the Sulfolobus solfataricus type III-D CRISPR complex genera

209 In the crenarchaeon Sulfolobus solfataricus, type IV pili formation is stron

210 The archaeon Sulfolobus solfataricus uses a catabolite repression-lik

211 The crenarchaeon Sulfolobus solfataricus uses arginine to produce putresc

212 differences, we have characterized Dpo4 from Sulfolobus solfataricus using the same biochemical and c

213 ructure of the CSM complex from the archaeon Sulfolobus solfataricus, using a combination of electron

214 ctive wild-type Saccharomyces cerevisiae and Sulfolobus solfataricus Vps4 enzymes can form hexamers i

215 ative LipA from the hypothermophilic archaea Sulfolobus solfataricus was expressed in Escherichia col

216 aea, the splicing endonuclease from archaeum Sulfolobus solfataricus was found to contain two differe

217 The archaeon Sulfolobus solfataricus was sensitive to mercuric chlori

218 us work, the thermoacidophilic crenarchaeon, Sulfolobus solfataricus, was subjected to adaptive labor

219 etypal Y-family member from the thermophilic Sulfolobus solfataricus, was used to extend our kinetic

220 iota and Dpo4 from the archaeal thermophile Sulfolobus solfataricus We found that hpol eta and Dpo4

221 the third replication origin in the archaeon Sulfolobus solfataricus, we identify and characterise si

222 sidase (maltase) and flanking sequences from Sulfolobus solfataricus were cloned and characterized.

223 ) from the thermoacidophilic archaebacterium Sulfolobus solfataricus were compared to the well-charac

224 ts of the extreme acidothermophilic archaeon Sulfolobus solfataricus were incubated with [gamma-(32)P

225 d two origins of replication in the archaeon Sulfolobus solfataricus, whereas a second study used a d

226 e demonstrate that the XPF endonuclease from Sulfolobus solfataricus, which is dependent on the slidi

227 G-CoA reductase of the thermophilic archaeon Sulfolobus solfataricus, whose stability recommends it f

228 lesion-bypass DNA polymerase IV (Dpo4) from Sulfolobus solfataricus, with template guanine and Watso

229 The Sulfolobus solfataricus Y-family DNA polymerase Dpo4 is