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1 TRN dendritic and axonal morphologies are inconsistent w
2 TRN dysfunction has been linked to sensory abnormality,
3 TRN neurons are also coupled to one another by electrica
4 TRN neurons are interconnected by a network of GABAergic
5 TRN-1 bound directly to capsid nanotubes and induced dra
6 TRN-restricted deletion of Ptchd1 leads to attention def
7 TRN-SR2 was originally identified in a yeast two-hybrid
8 TRNs are characterized by the abundance of motifs such a
9 we identify beta-karyopherin Transportin-1 (TRN-1) as a cellular co-factor of HIV-1 infection, which
10 chronous and imprecise rebound bursting; (2) TRN-mediated lateral inhibition that further desynchroni
13 state, touch stimuli sufficient to activate TRNs induce an average strain of 3.1% at the center of t
16 nal modeling to demonstrate how the amygdala-TRN pathway, embedded in a wider neural circuit, can med
18 notation of regulatory features of genes and TRN reconstruction are challenging tasks of microbial ge
19 ndle epoch, oscillatory activity in mPFC and TRN increased in frequency from onset to offset, accompa
20 aptic circuits that generate rhythmicity and TRN cell-intrinsic mechanisms that control PF and oscill
22 spatial influence of bAP signaling in TC and TRN neurons is more restricted, with potentially importa
23 terior Hox proteins transformed the anterior TRN subtype toward a posterior identity both morphologic
28 ile the reciprocal synaptic circuits between TRN and sensory relay nuclei are known to underlie the g
29 nstrated that the direct interaction between TRN-SR2 and HIV integrase predominantly involves the cat
35 rom the ventral posterior nucleus to central TRN cells transmit rapid excitatory currents that depres
36 ow captures different aspects of the E. coli TRN than expression-based approaches, potentially making
38 c cholinergic receptors, thereby controlling TRN neuronal activity with high spatiotemporal precision
40 The anterior subtype maintains a default TRN state, whereas the posterior subtype undergoes furth
44 he posterior medial thalamic nucleus to edge TRN cells evoke slower, less depressing excitatory curre
46 of the Erbb4 gene in somatostatin-expressing TRN neurons markedly alters behaviors that are dependent
51 utoregulation of mec-3 is not sufficient for TRN differentiation; ALR-1 provides a second positive fe
53 A-seq, we compare transcription profiles for TRNs with those of two other sensory neurons, and presen
56 ity to deal with the complexity of a genomic TRN, providing a snapshot of the synergistic TFs regulat
61 nical findings, our results support impaired TRN-PV neuron activity as a potential cause of schizophr
62 we anticipate that our methods will improve TRN inference in new mammalian systems, especially in vi
63 recorded slow forms of rhythmic activity in TRN neurons, which were driven by fast glutamatergic tha
64 ent functions, including rebound bursting in TRN neurons, with potential implications for schizophren
66 dence and strength of electrical coupling in TRN was sharply reduced, but not abolished, in KO mice.
69 that intracellular Cl(-) levels are high in TRN neurons, resulting in a Cl(-) reversal potential (E(
70 ther underscore the importance of the HIV-IN TRN-SR2 protein-protein interaction for HIV nuclear impo
71 ns and their axons evokes GABAergic IPSCs in TRN neurons in mice younger than 2 weeks of age but fail
74 ata, MEC-10, but not MEC-6, formed puncta in TRN neurites that colocalize with MEC-4 when MEC-4 is ov
75 s no effect on spontaneous IPSCs recorded in TRN neurons aged 2 weeks or older while dramatically red
76 specifically, FFLs) in signal propagation in TRNs and the organization of the TRN topology with FFLs
77 n for HIV nuclear import and validate the IN/TRN-SR2 interaction interface as a promising target for
80 mented in the RegPredict Web server to infer TRN in the model Gram-positive bacterium Bacillus subtil
87 expressing parvalbumin (PV neurons), a main TRN neuronal population, and associated Wisteria floribu
88 c inhibitory circuitry, neuronal morphology, TRN cell function and electrical coupling requires Cx36.
89 ents evokes near-synchronous firing in mouse TRN neurons that is rapidly desynchronized in thalamic n
94 , by its transcriptional regulatory network (TRN) that coordinates its gene expression to respond to
97 ring of transcriptional regulatory networks (TRN) from genomics data has always represented a computa
98 rks and transcriptional regulatory networks (TRNs) by combining them into more complex circuitries of
99 nstruct transcriptional regulatory networks (TRNs) focus primarily on proximal data such as gene co-e
100 ling of transcriptional regulatory networks (TRNs) has been increasingly used to dissect the nature o
101 logy of transcriptional regulatory networks (TRNs) is an effective way to study the regulatory intera
102 tion of transcriptional regulatory networks (TRNs) is of significant importance in computational biol
105 yet the transcriptional regulatory networks (TRNs) that control ILC function are largely unknown.
106 In transcriptional regulatory networks (TRNs), a canonical 3-node feed-forward loop (FFL) is hyp
107 complex transcriptional regulatory networks (TRNs), which are still only partially understood even fo
108 ee-node transcriptional regulatory networks (TRNs), with three different types of gene regulation log
111 two subtypes of the touch receptor neurons (TRNs) in C. elegans, we found that a "posterior inductio
112 scles in mammals and touch receptor neurons (TRNs) in Caenorhabditis elegans nematodes are embedded i
114 e well-characterized touch receptor neurons (TRNs) of Caenorhabditis elegans to investigate this ques
117 tle touch in the six touch receptor neurons (TRNs) using a mechanotransduction complex that contains
118 h is mediated by six touch receptor neurons (TRNs), and is dependent on MEC-4, a DEG/ENaC channel.
119 ucial markers in the touch receptor neurons (TRNs), we visualized and measured touch-induced mechanic
123 extend our previous Th17 TRN, using our new TRN inference methods to integrate all Th17 data (gene e
126 ecordings in the thalamic reticular nucleus (TRN) and medial prefrontal cortex (mPFC) of freely behav
127 volvement of the thalamic reticular nucleus (TRN) come from its unique neuronal characteristics and n
128 t neurons in the thalamic reticular nucleus (TRN) form GABAergic synapses with other TRN neurons and
129 c neurons in the thalamic reticular nucleus (TRN) form powerful inhibitory connections with several d
130 s known that the thalamic reticular nucleus (TRN) gates sensory information en route to the cortex, b
131 The inhibitory thalamic reticular nucleus (TRN) is a hub of the attentional system that gates thala
138 c neurons in the thalamic reticular nucleus (TRN) of mice and rats form two types of GJ-coupled clust
139 , neurons in the thalamic reticular nucleus (TRN) participate in distinct types of oscillatory activi
140 ithin the mature thalamic reticular nucleus (TRN) powerfully inhibit ventrobasal (VB) thalamic relay
141 ic activation of thalamic reticular nucleus (TRN) rapidly induces slow wave activity in a spatially r
146 ion in the mouse thalamic reticular nucleus (TRN), a brain structure essential for sensory processing
147 nsmission in the thalamic reticular nucleus (TRN), a brain structure intimately involved in the contr
148 expressed in the thalamic reticular nucleus (TRN), a group of GABAergic neurons that regulate thalamo
149 s the inhibitory thalamic reticular nucleus (TRN), a key node in the brain's attentional network.
154 r, it remains unclear whether alterations of TRN activity can account for abnormal electroencephalogr
155 our study provides a comprehensive atlas of TRN neurons at single-cell resolution and links molecula
156 med unusual synapses close to cell bodies of TRN neurons and had more large and efficient terminals t
157 nstructed neuron, revealed three clusters of TRN neurons that differed in cell body shape and size, d
158 gle X-ray scattering data for the complex of TRN-SR2 with truncated integrase, we propose a molecular
161 mice, we found that brief selective drive of TRN switched the thalamocortical firing mode from tonic
162 des quantitative, genome-scale evaluation of TRN inference, combining ATAC-seq and RNA-seq data.
165 egrase interacts with the N-terminal half of TRN-SR2 principally through the HEAT repeats 4, 10, and
168 was used to characterize the interaction of TRN-SR2 with a truncated variant of the HIV-1 integrase,
169 latory activity, mediated by an interplay of TRN-VB synaptic circuits that generate rhythmicity and T
170 e deletion of Cx36 affects the maturation of TRN and VB neurons, electrical coupling and GABAergic sy
172 the dLGN, we reconstructed a large number of TRN neurons that were retrogradely labeled following inj
173 Differences in the intrinsic physiology of TRN cell types, including state-dependent bursting, cont
175 ompanied by a consistent phase precession of TRN spike times relative to the cortical oscillation.
176 can help study the structural properties of TRN based on connectivity and clustering tendency of mot
178 We find that optogenetic stimulation of TRN neurons and their axons evokes GABAergic IPSCs in TR
179 lts provide insights into how subnetworks of TRN neurons may differentially process distinct classes
180 ulate activity of the major subpopulation of TRN GABAergic neurons, which express the calcium-binding
181 suggest that there exist a subpopulation of TRN neurons that receive convergent inputs from multiple
182 s integrative approach enabled generation of TRNs with increased information content relative to R. s
184 ch approaches enable rapid reconstruction of TRNs, the overwhelming combinatorics of possible network
187 nically relevant behavioural phenotypes onto TRN dysfunction in a human disease model, while also ide
189 eus (TRN) form GABAergic synapses with other TRN neurons and that these interconnections are importan
190 proach can be used to simultaneously produce TRN models for each related organism used in the compara
193 can be successfully used to help reconstruct TRNs from high-throughput data, and highlights the poten
195 nd the chaperones; this antagonism regulates TRN development, as well as synaptic functions of GABAer
196 flow and observations to build a large-scale TRN model for the alpha-Proteobacterium Rhodobacter spha
197 a novel workflow for generating large-scale TRN models that integrates comparative genomics data, gl
199 the PFC does not directly project to sensory TRN subnetworks, the circuitry underlying this process h
205 g specializations of these two somatosensory TRN subcircuits therefore appear to be tuned to the sign
208 tion of predictions from this R. sphaeroides TRN model showed that high precision and recall was also
217 dramatic structural damage, indicating that TRN-1 is necessary and sufficient for uncoating in vitro
224 t except for a short period after birth, the TRN of the mouse lacks intrinsic GABAergic connections.
225 nges occur (e.g., the expression of both the TRN mRNAs and proteins) when the FLP neurons ectopically
228 lf was predominantly present as a dimer, the TRN-SR2-RanGTP complex was significantly more compact.
233 We found that cellular heterogeneity in the TRN is characterized by a transcriptomic gradient of two
235 profound abnormalities of PV neurons in the TRN of subjects with SZ and BD, and offer support for th
238 ve for PV) and WFA/PNNs were observed in the TRN, with no effects of duration of illness or age at on
241 ponse properties in the visual sector of the TRN and measured an inhibitory relationship with the con
242 neurons arrayed across the thickness of the TRN and target their axons to both first- and higher-ord
243 elationship between the visual sector of the TRN and the dLGN, we reconstructed a large number of TRN
249 de causal support for the involvement of the TRN in state regulation in vivo and introduce a new mode
251 structural organization and function of the TRN is particularly interesting in the context of highly
253 opose that ErbB4 sets the sensitivity of the TRN to cortical inputs at levels that can support sensor
257 g functional modules within the plane of the TRN, with axons that selectively inhibit local groups of
258 Finally, we present a homology model of the TRN-SR2-RanGTP complex that is in excellent agreement wi
259 ch reside along the surrounding edges of the TRN-synapse with the posterior medial thalamic nucleus,
262 iated by an enhanced cortical drive onto the TRN that promotes the TRN-mediated cortical feedback inh
263 ortical drive onto the TRN that promotes the TRN-mediated cortical feedback inhibition of thalamic ne
264 alamic nuclei across brain states, where the TRN separately controls external sensory and internal li
266 effective channel for the ensemble along the TRNs, this study integrates body mechanics and the spati
267 tween the extracellular matrix (ECM) and the TRNs but could not detect any differences in touch-induc
270 7 are also essential for gentle touch in the TRNs, as well as harsh touch in both the TRNs and the PV
274 the experimental findings, predicts that the TRNs function as a band-pass mechanical filter, and prov
279 ~67% of the predicted gene clusters in this TRN are enriched for functions ranging from photosynthes
280 idated the organization and activity of this TRN by applying independent component analysis to a comp
282 es, whereas late cells fired in antiphase to TRN activity and also had higher firing rates than early
284 ation of a major GABA/PV inhibitory input to TRN arising from basal forebrain parvalbumin neurons (BF
291 Whereas the sensory dendrite of wild-type TRNs is packed with a cross-linked bundle of long, 15-pr
298 in IN as important for the interaction with TRN-SR2: Phe-185/Lys-186/Arg-187/Lys-188 in the CCD and
299 arly cells generally fired in synchrony with TRN spikes, whereas late cells fired in antiphase to TRN
300 y, roles A, B and C), and contrast them with TRN nodes having high connectivity on the basis of their