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1 nt ZFNs available for targeting almost every base step).
2 y significant contacts to an adenine-thymine base step.
3 ues ranged from 20 degrees to 50 degrees per base step.
4 lue comparable to the stacking energy of one base step.
5 ues for helical rise and twist at individual base steps.
6 t deprotonation of the carboxylic acid under base (Step 4), while in the absence of base a stable car
8 of a trapped proton cloud from the AMF using BASE-STEP(9)-a transportable, superconducting, autonomou
10 ior determination of the pronounced 5'-TA/TA base-step affinity of the drug have prompted us to inves
12 ugh its dual functionality, with microtubule-based stepping and regulation of microtubule dynamics.
13 intercalated into the 5'-CG/CG and 5'-GA/TC base steps, and penetration of the duplexes occurred fro
14 with a DNA duplex containing a flexible TpA base step at the +1/+2-flanking sites of the target nucl
15 sence of a severely underwound central py.pu base step (average = 24.1 degrees), which lies on a crys
17 ist decrease to approximately 30 degrees per base step, but every base step was approximately 30 degr
20 antihypertensive therapy with chlorthalidone-based stepped-care therapy resulted in a lower rate of c
21 o the development of more effective evidence-based stepped-care treatment algorithms for patients wit
22 (2) maintaining DNA structures dependent on base-step conformational tendencies consistent with the
23 es a detailed description of the dynamics of base-step conformational transitions and of the first st
24 icroscopy and developed a set of information-based step detection procedures to estimate the number o
27 oit et al. have advocated use of permutation-based step-down P-value adjustments to correct the obser
29 rimental data, including local deviations in base step helicoidal parameters in the region of the GU
30 ccessible roll values were obtained for each base step in the relevant octanucleotide context to acco
33 ty of applying the experimental and software-based steps in multiple-complete-digest mapping to a tar
34 ude the sequence-dependent differences among base steps, in which values ranged from 20 degrees to 50
35 npeptidic, single-digit micromolar mechanism-based STEP inhibitors with greater than 20-fold selectiv
36 red daily step count and established cadence-based step intensity measures (steps/min): incidental st
39 relationship between local structure at the base-step level and the global superhelical conformation
40 tecture in which segments as small as single base steps may be considered as modular recognition unit
41 useful stereochemical measures of the local base step movements operative in sequence-specific recog
42 photoadduct formation to the intended 5'-TpA base step next to the PNA-binding site, and the photoadd
43 line recapitulates the endoplasmic reticulum-based steps of the eukaryotic protein N-glycosylation ma
44 mber of complex and expensive chromatography-based steps, operated in batch mode, that rely heavily o
47 in groove narrowing through: (i) changes in base step parameters, including increased helical twist
51 eters in protein-DNA crystal structures, GpG base steps show A-like properties, reflecting their inna
52 elix is more similar to both the helical and base step structural parameters of A'-RNA rather than A-
53 he larger 3' bend, 10 degrees, occurs in two base steps: the first composed of tilt, -4.1 degrees, an
54 litated by a highly deformable local -C3-A4- base step, this amino group allows the B[a]P ring system
55 ads, zipper-like interdigitation and sheared base steps, together with base-base and base-sugar stack
56 degrees to 50 degrees kink at a central CpG base step towards the major groove, as dyad-related leuc
57 ximately 30 degrees per base step, but every base step was approximately 30 degrees, suggesting that
58 x 2 covalently modifies adenine at GA and TA base steps, which are high-affinity intercalation sites