ライフサイエンスコーパス: be sequenced

1 bacteriophage oX174, the first DNA genome to be sequenced.

2 eased when tumor samples from multiple sites are sequenced.

3 ts] and biopsies [160 mg/day and expansion]) was sequenced.

4 ubisco activase (RCA) gene from each species was sequenced.

5 A from both simulated FNAs and clinical FNAs was sequenced.

6 d from mothers and infants and the fecal DNA was sequenced.

7 population isolate where 98 individuals have been sequenced.

8 and thousands of human genomes have already been sequenced.

9 red with other warm-season legumes that have been sequenced.

10 aluating if sufficient numbers of cells have been sequenced.

11 enome of an 18,500-year-old woolly rhino has been sequenced.

12 ncreasing number of non-model organisms have been sequenced.

13 array of strains from different sources have been sequenced.

14 ich the genomes of multiple individuals have been sequenced.

15 phic DNA (RAPD) and distinctive lactobacilli were sequenced.

16 d diagnosed with replicating HCV infections, were sequenced.

17 pathy genes, including 9 prespecified genes, were sequenced.

18 D8 isolates from outside the epidemic period were sequenced.

19 CR amplified for Pfhrp2 and Pfhrp3 genes and were sequenced.

20 h a positive initial screen for C. difficile were sequenced.

21 four affected and two unaffected individuals were sequenced.

22 locations, and 1854 patients; 1819 isolates were sequenced.

23 from neuronal DNA, and neuronal L1 libraries were sequenced.

24 7 unilateral affected cases and 14 controls were sequenced.

25 racterised physiologically and their genomes were sequenced.

26 nomes of 90 individuals across nine families were sequenced.

27 NA from samples enriched for virus particles were sequenced.

28 o samples; the genomes of these two isolates were sequenced.

29 spective observational study, 1,029 isolates were sequenced.

30 Representative genomes were sequenced.

31 16-2018 outbreak linked to pet store puppies were sequenced.

32 -transcriptase polymerase chain reaction and were sequenced.

33 e, and V3 to V4 regions of the 16S rRNA gene were sequenced.

34 F proteins and influenza hemagglutinin genes were sequenced.

35 Ten TGCTs with 1-3 histologic types/tumour were sequenced.

36 e the neutralizing capacity of the antiserum were sequenced.

37 in different fractions of the transcriptome being sequenced.

38 Each sample was sequenced (16S SSU rRNA genes, average 10,000 reads)

39 The first stored isolate from each case was sequenced (200 VREfm [197 vanA, 2 vanB, and 1 isolat

40 Of the 34 residents whose specimens were sequenced, 27 (79%) had sequences that fit into two

41 Of 213 true-positive samples that were sequenced, 36.2% showed point mutations associated

42 m blood plasma and genital tract RNA and DNA were sequenced across HIV-1 env gp160.

43 Two of these DNAs were sequenced after Phi29 polymerase amplification, and

44 A subset of 297 E. coli strains were sequenced allowing in silico analyses of phylo- and

45 in the United Kingdom, France, and Tunisia, were sequenced along with the type strain.

46 screening approach in which expressed sgRNAs are sequenced alongside single-cell transcriptomes.

47 enomes of R. multicaudata and Trypanobia sp. are sequenced and analysed, representing the first ones

48 herein RNA transcripts expressed in a sample are sequenced and quantified, has become a widely used t

49 yclinone (sim) biosynthetic gene cluster has been sequenced and a hypothetical biosynthetic pathway h

50 For organisms whose genomes have not been sequenced and annotated, transcriptomes must be ass

51 plant pathogens that have genomes that have been sequenced and annotated.

52 Hundreds of vertebrate genomes have been sequenced and assembled to date.

53 averyi Chatin and Tirmania nivea Trappe have been sequenced and compared with other Pezizomycetes.

54 ting hosts in the phylum Actinobacteria have been sequenced and grouped into Cluster A because of the

55 few diatom plastid genomes (plastomes) have been sequenced and studied.

56 irst time that the entire region of MYOC has been sequenced and variants reported for a cohort of POA

57 After a new genome is sequenced and assembled, structural gene annotation i

58 CCUG 4207(T) was sequenced and a de novo hybrid assembly was generate

59 The env gp41 region was sequenced and characterized for 172 HIV-positive spe

60 n cob found in the Tehuacan Valley in Mexico was sequenced and compared to modern maize and its wild

61 levels of HDL cholesterol and Lp(a), SCARB1 was sequenced and demonstrated a missense mutation resul

62 Here, the complete genome of strain JS3050 was sequenced and key genes were expressed heterologousl

63 First, the C. brunneus transcriptome was sequenced and RNAi functionality was confirmed by su

64 usca single nucleopolyhedrovirus (PeluSNPV), was sequenced and shown to contain 132,831 bp with 145 p

65 Further, the viral genome was sequenced and subjected to phylogenetic analysis.

66 ivable morel strain (M. importuna SCYDJ1-A1) was sequenced and the genes coding for the decay apparat

67 The detected PRSV coat protein PCR product was sequenced and the nucleotide sequence showed identit

68 The bacterial producer of deimino-antipain was sequenced and the responsible biosynthetic gene clus

69 The amplified products were sequenced and analyzed by phylogenetic analyses.

70 of segregating thermotolerant (mutant) seeds were sequenced and analyzed for homozygous single-nucleo

71 solates (n = 297) from multiple host species were sequenced and analyzed for patterns of gene dispers

72 tment were analyzed; 16S ribosomal RNA genes were sequenced and analyzed from each sample.

73 All amplicons of >=9 kb were sequenced and analyzed through a bioinformatic pipe

74 91 mitogenomes from 32 different species were sequenced and assembled with high fidelity, using a

75 K pneumoniae carrying bla(NDM) and bla(KPC) were sequenced and CG258 isolates selected for bacteriop

76 l DNA was extracted, and shotgun metagenomes were sequenced and characterised using MG-RAST.

77 ni strains WP2-202 and OD2-67, respectively, were sequenced and characterized.

78 rom Sudan (wild type) and six of the mutants were sequenced and compared to identify candidate genes

79 Genomes were sequenced and compared to known strains, mostly col

80 egrading and nondegrading BIOMIG1 phenotypes were sequenced and differentially compared with each oth

81 and the D2 region of 28S ribosomal RNA gene were sequenced and fungi identified.

82 isolates from mild, severe, and fatal cases were sequenced and highly similar with each other.

83 When the breaks were sequenced and mapped, they were widely distributed

84 from 68 participants from 2016 through 2017 were sequenced and paired with epidemiological data.

85 itional examination of BQCV where 74 samples were sequenced and placed in a global phylogenic framewo

86 Peptides extracted from biopsy specimens were sequenced and quantified using label-free mass spec

87 ng messenger RNA (mRNA) and microRNA (miRNA) were sequenced and quantified, and a differential expres

88 AMR was tested in vitro and isolate genomes were sequenced and screened for putative AMR genes and a

89 able region V3-V4, and constructed libraries were sequenced and subjected to bioinformatic and statis

90 oradic cases collected between 2001 and 2012 were sequenced and subjected to subtyping by four differ

91 r Clinical Laboratories (NCCL), of which 179 were sequenced and subtyped in the gag, protease (PR)-re

92 ing beta-giardin and glutamate dehydrogenase were sequenced and their alignment were carried out with

93 ody interactions, the heavy and light chains were sequenced and their coordinates, along with the AAV

94 Isolates were sequenced and their genomes compared.

95 In this study, an additional 176 specimens were sequenced and used to characterize the population s

96 The monarch genome has been sequenced, and genetic strategies using nuclease-ba

97 have dropped, thousands of new genomes have been sequenced, and scientists have come to realize that

98 Clinical isolates from 609 patients were sequenced, and 567 (93%) were identified as sequenc

99 me and its nuclear and mitochondrial genomes were sequenced, and no chloroplast genome-wide compariso

100 ts after immunization, their VH and VL genes were sequenced, and the corresponding antibodies charact

101 SPINK5 mutations were sequenced, and thorough clinical evaluation and his

102 The genomes of giraffe and okapi were sequenced, and through comparative analyses genes a

103 sed by pyrophosphorolysis from the strand to be sequenced, are captured in microdroplets and read dir

104 We present 1,003 reference genomes that were sequenced as part of the Genomic Encyclopedia of Ba

105 Further, the bacterium's genome was sequenced, assembled and annotated to study its gene

106 he parents are not genotyped and individuals are sequenced at <1x coverage.

107 entire cancer genome or parts of it can now be sequenced at speed with increased depth and sensitivi

108 orward tasks on a single individual that has been sequenced at high coverage, because the inference d

109 ng and genotyping of large cohorts that have been sequenced at low coverage.

110 Bacterial genomes are being sequenced at an exponentially increasing rate, but

111 Genomes of emerging model organisms are now being sequenced at very low cost.

112 The first mammoth was sequenced at 17.1-fold coverage and dates to approxi

113 Most of the pathogens detected were sequenced at sufficient breadth and depth to confid

114 When the online intervention was sequenced before (average knowledge gain, 14.6%; SD,

115 ntire Tst locus along with flanking segments was sequenced between our unique polygenic mouse Fat and

116 salivary and cutaneous cancers, whose tumors were sequenced between January 2014 and July 2015 at Mem

117 salivary and cutaneous cancers, whose tumors were sequenced between January 2014 and July 2015 at Mem

118 Fragments of interest are sequenced by default, while DNA deemed non-informati

119 The generated amplicons could be sequenced by different methods, such as population Sa

120 using small amounts of input RNA that cannot be sequenced by standard methods.

121 Ideally, such genomes would be sequenced by two different methods so that one assemb

122 onal immunoglobulin light chain FR2-CDR2-FR3 was sequenced by database-aided de novo MS/MS and 100% m

123 Each enzyme was sequenced by mass spectometery (deconvoluted with an

124 The HBV genome was sequenced by next-generation sequencing (NGS).

125 ntire coding region of 15 OpSCC driver genes was sequenced by next-generation sequencing in 51 OpSCC

126 The full viral genome was sequenced by primer walking.

127 DNA was sequenced by the Genetic Analyzers ABI Prism 310 (Pe

128 A panel of 116 SNPs was sequenced by using the Sequenom iPLEX Gold platform

129 ostats, and artificial microbial communities were sequenced by 15 laboratories and analyzed using nin

130 The virus populations were sequenced by 454 pyrosequencing at the end of passa

131 y-two clones corresponding to 22 FPC contigs were sequenced by Illumina MiSeq technology.

132 ternal Transcribed Spacer 1 (ITS1) amplicons were sequenced by Illumina MiSeq.

133 ated from DFPE and fresh frozen (FF) tissues were sequenced by NGS.

134 which were present in >100 nmol amounts and were sequenced by sequential MS fragmentation (MS(n)).

135 ter (or in 1 case, 62 weeks after) infection were sequenced by single-molecule, real-time technology,

136 osomal extracts, and the resulting fragments were sequenced by using mass spectrometry.

137 re than 1,400 mycobacteriophage genomes have been sequenced, coding for over one hundred thousand pro

138 d that 84% of an individual human genome can be sequenced confidently.

139 past decade, thousands of human genomes have been sequenced, contributing deeply to biomedical resear

140 he confidence measurement that each base has been sequenced correctly.

141 died with the utility of its complete genome being sequenced coupled with well-established techniques

142 ative whereby individual polyadenylated RNAs are sequenced directly, without the recoding and amplifi

143 The complete genome of a novel coronavirus was sequenced directly from the cloacal swab of a Canada

144 Now, its genome has been sequenced, enabling renewed experimental study and

145 e efficient, allowing whole human genomes to be sequenced faster and cheaper than ever before.

146 een isolates from six suspected XDR-TB cases were sequenced; five cases were analyzed in a clinically

147 s, barcoded and pooled CUT&Tag libraries can be sequenced for as little as $25 per sample.

148 gically characterized infectious P-MLVs have been sequenced for comparative analysis.

149 Genomic DNA from all 1007 NYBCS probands was sequenced for 23 known and candidate breast cancer g

150 The staphylococcal protein A (spa) gene was sequenced for all isolates to determine a spa type.

151 reast Cancer Study (NYBCS) from 1996 to 2000 was sequenced for known and candidate breast cancer gene

152 -epithelium swabs (matched control subjects) was sequenced for the V1-V3 region using Illumina's 2 x

153 Samples from people with ALS were sequenced for 13 ALS genes.

154 total of 1,195 serum and/or tumor specimens were sequenced for BRCA1/2 and damaging mutations in hom

155 Amplicons of RT-PCR positive cases were sequenced for characterisation of strains.

156 ttsii, the genomes of two additional strains were sequenced for comparison to known sequences (compar

157 lium samples from cases failing moxifloxacin were sequenced for fluoroquinolone resistance mutations.

158 HRV-positive samples were sequenced for phylogenetic analysis by targeting th

159 at baseline and at time of treatment failure were sequenced for resistance-associated substitutions i

160 used to prepare sequencing libraries, which are sequenced from the 3' end to provide high-resolution

161 Though multiple HSV-1 genomes have been sequenced from Europe to date, there is a lack of s

162 nd the first time that multiple genomes have been sequenced from sub-Saharan Africa, a geographic are

163 The 479 Mb medfly genome is sequenced from adult flies from lines inbred for 20 g

164 RNA was sequenced from 9 pollens, and the reads were assembl

165 The full genome of the bacterium was sequenced from a blood isolate.

166 platform was applied and the transcribed RNA was sequenced from a collection of different lily and tu

167 The DEPDC5 gene was sequenced from genomic blood and brain DNA.

168 enome of intra-host HBV variants (N = 1,288) was sequenced from patients with rapid (RR, N = 5) and s

169 Germline DNA was sequenced from women with OC using a targeted captur

170 cDNA-TCR beta-chain libraries were sequenced from 2 million peripheral mononuclear cel

171 Muscle microRNAs and mRNAs were sequenced from 22 families showing divergent phenot

172 A total of 161 pre-diet fecal samples were sequenced from a discovery cohort (n = 66) and 106

173 Fifteen soybean small RNA libraries were sequenced from different stages of nodule developme

174 lic potential, shotgun metagenomic libraries were sequenced from low and elevated pCO(2) treatments c

175 nes, encoding subunits of CMV DNA terminase, were sequenced from plasma collected from subjects with

176 exons and adjacent regions of the NAGLU gene were sequenced from six healthy appearing and three affe

177 Amplicon barcodes were sequenced from the blood of 56 adult zebrafish divi

178 An additional 157 fecal samples were sequenced from the discovery cohort after 10 weeks

179 iscrete acoustic elements ("syllables") that are sequenced in a controlled manner.

180 lows that require fractions of the genome to be sequenced in a large number of compartments.

181 ity maturation." The resulting receptors can be sequenced in high throughput for research and diagnos

182 Since 96 samples can be sequenced in one run, the method has high potential f

183 nable merging of paired end reads and should be sequenced in the PE150 format with a minimum sequenci

184 lanesians the coding region of the MC1R gene was sequenced in 188 individuals from Northern Island Me

185 SCN10A was sequenced in 225 AF patients in whom there was no ev

186 A chromosome 6 locus (7,370,061-7,606,946) was sequenced in 230 subjects with IPF and 228 control s

187 STAT1 was sequenced in 3 patients with PML.

188 IFITM3 was sequenced in patients and parents were genotyped for

189 ied in other B-cell malignancies, 1716 genes were sequenced in 113 FL tumor samples from 105 primaril

190 ct FFPE vs. fresh frozen (FF) replicates, 57 were sequenced in 2 different labs, 87 underwent multipl

191 Candidate genes identified by WES were sequenced in an additional cohort of 167 familial o

192 Coding single nucleotide polymorphisms were sequenced in candidate genetic modifier genes encod

193 region, exon-intron junctions of four genes were sequenced in DNA from 39 Saudi VKH patients and 50

194 osomal RNA molecules and the associated gene were sequenced in order to obtain the active (RNA) and r

195 Candidate genes and whole exomes were sequenced in relapse tumor biopsies to search for m

196 [NSCLC], colorectal carcinoma, and melanoma) were sequenced in the context of the UK National Health

197 Thirty unique non-host RNAs were sequenced in the cultivated fungus, Agaricus bispor

198 is, samples positive for RSV A ON1 (N = 139) were sequenced in the second half of the G gene.

199 t LD-causing Legionella species (of which 33 were sequenced in this study) in addition to 10 publicly

200 dorus vineacola and Paralongidorus litoralis were sequenced in this study.

201 However, in designing the panel of genes to be sequenced, investigators need to consider the tradeof

202 Many of these crops have been sequenced, like rice, Brachypodium, maize and, more

203 e target genome (exome, transcriptome, etc.) is sequenced multiple times.

204 ther isolate collected between 2009 and 2014 was sequenced (n = 275).

205 divide the genome into fragments whose ends are sequenced on short-read sequencing platforms.

206 gment of DNA; subsequently, the tagged reads are sequenced on standard short-read platforms.

207 eam analysis pipelines while the samples are being sequenced on the MinION device.

208 ination is strongly associated with a sample being sequenced on the same day as a tissue that nativel

209 p-frozen gastric corpus tissues and 16S rRNA was sequenced on GS-FLX Titanium.

210 The 16S RNA hypervariable region V4 was sequenced on Illumina MiSeq.

211 2 weeks in 2018, and 1 MRSA isolate per case was sequenced on the Illumina MiniSeq instrument.

212 truly sporadic trichilemmal cysts that could be sequenced, only half showed the p.S745L somatic mutat

213 ed the maximum number of isolates that could be sequenced per run using an Illumina MiniSeq platform

214 With increasing bacterial genomes being sequenced, similar host mining strategies might be

215 Furthermore, because many more samples can be sequenced simultaneously, projects can be completed a

216 The genomes of nine ascidian species have been sequenced since the release of the C. intestinalis

217 ly a tiny fraction of the Earth's virome has been sequenced so far.

218 Recently, two duckweed genomes have been sequenced (Spirodela polyrhiza strains 7498 and 950

219 As more genomes are sequenced, studying and classifying their asymmetrie

220 Five hundred fifty-four isolates were sequenced successfully, 353 from colonized patients

221 sed on analyzing bacteria whose genomes have been sequenced, such analyses are, however, complicated

222 As more diverse genomes are sequenced the emerging picture is of a highly subdiv

223 When multiple affected subjects in a family are sequenced, the probability that a variant or a set o

224 a, Goodyera fumata and Masdevallia picturata were sequenced; these genomes represent Vanilloideae, Cy

225 With every new genome that is sequenced, thousands of species-specific genes (orpha

226 The strain's whole-genome was sequenced through several next-generation sequencing

227 Analyses of metagenomic datasets that are sequenced to a depth of billions or trillions of bas

228 are available for comparison or when genomes are sequenced to low coverage.

229 d reference data are unavailable and genomes are sequenced to low coverage.

230 enomes of large numbers of single cells must be sequenced to further understanding of the biological

231 tion is whether similar sample sizes need to be sequenced to identify the FSVs.

232 bed species, but no mitochondrial genome has been sequenced to date.

233 To date, the only Neandertal genome that has been sequenced to high quality is from an individual fou

234 because the majority of specimens that have been sequenced to sufficient coverage are female.

235 ndreds of thousands of human genomes are now being sequenced to characterize genetic variation and us

236 ulting library is screened and the top clone is sequenced to determine the promoter controlling each

237 Plasma DNA obtained from a pregnant woman was sequenced to a depth of 270x haploid genome coverage

238 the allotetraploid species Coffea arabica L. was sequenced to assemble independently the two componen

239 el of wild species, landraces, and cultivars was sequenced to assess genetic variation within tuber-b

240 The maternal IgG3 gene was sequenced to identify the IgG3-H435 polymorphism.

241 ore, the genome of Streptomyces sp. RKND-216 was sequenced to identify the levesquamide biosynthetic

242 The samples were sequenced to a mean depth of 75x, yielding 101 sing

243 om four representative regions in China that were sequenced to an average 18.2 x coverage.

244 Eight diverse plastomes were sequenced to assess variation in structure and func

245 of isolate pairs from coinfected individuals were sequenced to determine their molecular characterist

246 The isolates' genomes were sequenced to determine their relatedness, and their

247 The full-length S and N genes were sequenced to study PDCoV genetic changes after pass

248 nd their normal tissue counterparts (n = 61) were sequenced to ~ 140 x and 85 x mean target coverage,

249 Samples were sequenced to ~500-1000x and reads were aligned to a

250 Although its genome has been sequenced, to date there is no report on targeted g

251 d genotype discordance of eight samples that were sequenced twice each to evaluate the proportion of

252 onal variations among different samples that are sequenced using next-generation-sequencing technolog

253 listically evolved tumour genomes, which can be sequenced using weighted-Wessim (w-Wessim), an in sil

254 The CBB transcriptome was sequenced using Illumina Hiseq and assembled de novo

255 ng the pncA coding region plus the promoter) was sequenced using Ion Torrent next-generation sequenci

256 d the methods on an HIV plasmid dataset that was sequenced using Primer ID, an amplicon-tagging proto

257 Calprotectin was measured and fecal DNA was sequenced using shotgun metagenomics and analyzed wi

258 The B. gladioli BCC0238 genome was sequenced using Single Molecule Real Time (SMRT) tec

259 The complete genome of Cordyceps militaris was sequenced using single-molecule real-time (SMRT) seq

260 obtained from the Children's Oncology Group was sequenced using the Illumina HiSeq 2000 system and s

261 The 16S rRNA gene was sequenced using the Illumina MiSeq platform in 1,206

262 regions V1-V3 and V3-V5 from these fractions were sequenced using 454.

263 ptible and six derived resistant populations were sequenced using a less costly approach by combining

264 Small RNA libraries were sequenced using a next-generation sequencing-based

265 A, and viral RNA from the viraemic timepoint were sequenced using a site-directed next-generation seq

266 tbreak-associated isolates) from south Wales were sequenced using an Illumina platform.

267 otype-specific primers and the same products were sequenced using both Sanger and 454 pyrosequencing

268 where pre- and post-treatment tumor samples were sequenced using DOP-PCR with sequencing coverage ~0

269 The stools were sequenced using Earth Microbiome project protocols

270 Bacterial V4 16S ribosomal DNA amplicons were sequenced using Illumina MiSeq.

271 In total, 129 known human deafness genes were sequenced using next-generation sequencing (NGS) to

272 More than 500 diverse soybean accessions were sequenced using specific-locus amplified fragment s

273 phyla/subphyla of bacteria and archaea that were sequenced using standardized RNA-seq methods.

274 Samples were sequenced using targeted enrichment on an Illumina

275 les of radish before and after fertilization were sequenced using the Digital Gene Expression (DGE) t

276 Here, 148 influenza A/H3N2 samples were sequenced using the HTS protocol and were compared

277 Isolates were sequenced using the Illumina Nextera XT protocol an

278 tracted, and partial 16S rRNA gene amplicons were sequenced using the Illumina platform.

279 Serum miRNA libraries were sequenced using the Illumina small RNA sequencing p

280 nMu A total of 1,152 Mu-tagged F(2)-families were sequenced using the Mu-seq approach.

281 er, 7 matched activated/nonactivated samples were sequenced using the Trugene HIV-1 genotyping kit.

282 nal samples from 120 patients undergoing IVF were sequenced using the V4 region of the 16S ribosomal

283 Ten additional patients were sequenced using whole-exome sequencing to infer the

284 NCTC 8198(T) was sequenced, using a PacBio platform; the genome seque

285 Amplicons were sequenced (V3-V4 hypervariable region of the 16S rR

286 sampled here, and one accession per species was sequenced via a high-throughput approach.

287 t acquisition, but as more bacterial genomes are sequenced, we are beginning to discover their preval

288 opulations of different ancestry backgrounds are sequenced, we expect variant reclassifications to in

289 The isolates were sequenced (whole genome, 16S, rpoB) by the Centers

290 Isolates were sequenced (whole genome, 16S, rpoB) by the Centers

291 fferentiate between loci that can and cannot be sequenced with high confidence utilize consensus betw

292 Tandem DNA repeats can be sequenced with long-read technologies, but cannot be

293 plets, allowing the full-length molecules to be sequenced with multi-fold coverage using short-read s

294 The chloroplast genome was sequenced with 161,528 bp in length, composed with o

295 er histories were collected and germline DNA was sequenced with NGS to identify mutations.

296 chment population of ~4 million (14 centers) were sequenced with a targeted 293-gene hematological-ma

297 lerosis patients and six healthy individuals were sequenced with ion-torrent and analyzed using DEseq

298 train containing two complex rearrangements, were sequenced with MinION.

299 patients with a range of metastatic cancers were sequenced, with a mean coverage of 95X and 16 somat

300 ix atmospheric nitrogen, but no genomes have been sequenced yet to test the hypothesis.