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1 d to the silenced domain by the transfer DNA boundary element.
2 est that this small deletion disrupts such a boundary element.
3 egulatory elements: promoters, enhancers and boundary elements.
4 tin structure and delimited in many cases by boundary elements.
5 dependence characteristic of known chromatin boundary elements.
6 tion domains demarcated by their surrounding boundary elements.
7 to distinct topological domains separated by boundary elements.
8 tal enhancers and the insulating activity of boundary elements.
9  at a distance and the insulator activity of boundary elements.
10 oposed to explain the insulating activity of boundary elements.
11 n these domains have been shown to be set by boundary elements.
12 histone turnover is found at known chromatin boundary elements.
13 tion during X inactivation can be blocked by boundary elements.
14 e associated with repositioning of chromatin boundary elements.
15 oncentration coinciding with the beta-globin boundary elements.
16                                              Boundary elements act via diverse mechanisms making accu
17  protein with enhancer blocking function and boundary-element activity.
18                     Chromatin insulators, or boundary elements, affect promoter-enhancer interactions
19 omologous or heterologous pairing with other boundary elements, also showed no reduction but rather e
20 trostatic potentials computed using a hybrid boundary element and finite difference nonlinear Poisson
21 esses an insulatory function suggestive of a boundary element and is crucial for cell differentiation
22 ains in the Bithorax complex is conferred by boundary elements and associated Polycomb response eleme
23 of long-lived LEFs, and LEF stabilization by boundary elements and DSB ends achieves fast synapsis wi
24 tially constrained from active genes by gene boundary elements and histone hyperacetylation.
25 he interaction between enhancers, silencers, boundary elements and promoters at individual loci, but
26 ts have focused on the role of CTCF-enriched boundary elements and TADs, which enable long-range DNA-
27                                      Certain boundary elements are adopted as DNA insulators for safe
28                      Insulators or chromatin boundary elements are defined by their ability to block
29  promoters of active genes, and insulator or boundary elements are found at buoyant densities similar
30 IC transcription factor binding sites within boundary elements are refractory to these factors.
31  requires both the loss of function from the boundary element as well as the up-regulation of UBE3A-A
32 uripotency-related transcription factors and boundary elements as positive and negative regulators of
33 uch as Suppressor of Hairy wing [SU(HW)] and Boundary Element Associated Factor of 32 kDa (BEAF-32) a
34 nome tiling arrays to compare Su(Hw), dCTCF, boundary element-associated factor (BEAF), and CP190 loc
35                           In particular, the boundary element-associated factor of 32 kDa (BEAF-32),
36                                          The Boundary Element-Associated Factor of 32 kDa, BEAF, was
37                                              Boundary element-associated factors (BEAFs) 32A and 32B
38             Binding sites for the Drosophila boundary element-associated factors BEAF-32A and -32B ar
39 genes affected by temperature suggested that boundary element association factor of 32 kDa (BEAF-32)
40 e inverted repeats IR-L and IR-R function as boundary elements at the edges of a 20-kb silent heteroc
41 gorithm that predicts the locations of human boundary elements based on the genomic distributions of
42                    This TAD is bordered by a Boundary Element (BE) that separates it from a region of
43 ctive chromatin, suggesting the existence of boundary elements between domains.
44                                    Chromatin boundary elements (CBEs) are widely distributed in the g
45 enced chromosomal domains and to surrounding boundary elements, connects heterochromatin with Amo1 at
46         Sequence analysis indicated that the boundary element contained a TY1 LTR, and a tRNA gene an
47                                    Chromatin boundary elements contribute to the partitioning of mamm
48  the template region, downstream pseudoknot, boundary element, core-closing stem and triple helix.
49 e editing to functionally define a bipartite boundary element critical for neuron-specific expression
50 d by reverse transcription into the template boundary element, demonstrating that the STE helps maint
51                                    Predicted boundary elements display two distinct features: first,
52                                     Non-tDNA boundary elements do not substitute for tDNAs in cohesio
53 ovide molecular evidence for imprinting at a boundary element flanking the SDHD locus and suggest tha
54            We show that inverted repeat (IR) boundary elements flanking the fission yeast mating-type
55 to these movements, that CTCF functions as a boundary element for moving cohesin, and they are consis
56 additional roles for RAP1 in heterochromatin boundary-element formation, creation of hotspots for mei
57 tivity of Frontabdominal-7 (Fab-7), a domain boundary element from the Drosophila melanogaster bithor
58 cassette inserted into the vector flanked by boundary elements from the viral latency locus showed hi
59 vities required for other silencing forms or boundary element function at tRNA gene loci.
60 ode structural components of chromosomes, in boundary element function.
61 trating that the STE helps maintain template boundary element function.
62 in the prediction of 2542 putative chromatin boundary elements genome wide.
63 of genome organization mediated by conserved boundary elements harboring highly and widely expressed
64  the silencing of genes within its path, and boundary elements have evolved to constrain such spreadi
65                                              Boundary elements hinder the spread of heterochromatin,
66                      Unlike all of the known boundary elements identified for Drosophila melanogaster
67 am RNA duplex, equivalent to the 5' template-boundary element in telomerase RNA, enhances the efficie
68                            The presence of a boundary element in this region has been suggested by ob
69 t the importance of replisome components and boundary elements in creating a specialized environment
70                  Two different insertions of boundary elements in the ap regulatory region were ident
71 nted Igf2 gene, suggesting that the proposed boundary element insulating this gene from the downstrea
72     Although it is now well-established that boundary elements/insulators function to subdivide eukar
73                                      Using a boundary element inverse solution, 3,360 virtual endocar
74  response to a DNA rearrangement replacing a boundary element (IR-R) with a ribosomal DNA repeat (rDN
75 e concentration distribution between the two boundary elements is then computed by ion-exchange theor
76                           Deletions of these boundary elements lead to spreading of H3 Lys9 methylati
77                            Deletion of these boundary elements led to the spread of silenced chromati
78               These data also suggest that a boundary element lying within the PWS critical region pr
79 s are evaluated by means of a fast multigrid boundary element (MBE) method.
80 ptide are carried out using a fast multigrid boundary element method (MBE).
81                         The precision of the boundary element method allows the unified description o
82 loiting direct numerical computation via the boundary element method and dynamical systems theory.
83 tributions in real time by reformulating the boundary element method for acoustic holography, and the
84                                    A precise boundary element method for the computation of hydrodyna
85                                            A boundary element method is used to compute the BSP resul
86 Here we describe an ensemble approach to the boundary element method that accurately predicts tau(c)
87 s number Couette flow are calculated using a boundary element method that solves an integral represen
88                        Recently, a numerical boundary element method was developed to solve the coupl
89                                    Using the boundary element method, a numerical mandibular model wa
90 ional model is solved computationally by the boundary element method.
91 ludes ECEPP/3 combined with a fast multigrid boundary element method.
92  potentials served as inputs to a high-order boundary-element method to produce 3360 potential points
93 calculated using slender-body theories and a boundary-element method.
94                                              Boundary element methods and numeric regularization were
95         We speculate that the 5' beta-globin boundary element might be important for the proper regul
96                                In this work, boundary element modeling is used to study the transport
97 matin DNaseI sensitivity assays indicating a boundary element near the beginning of the array.
98 normal 3' end of the DHFR gene constitutes a boundary element not only for the gene but also for the
99 s are in agreement with scaling analysis and boundary element numerical integration of the governing
100 servation of motifs (pseudoknot and template boundary element) observed in all published TRs.
101 s studies suggested that removal of a domain boundary element on the proximal side of Fab-7' is respo
102             We describe enhancer-blocking or boundary elements on either side of the locus that are b
103         To overcome this limitation, the two boundary elements, one at either side of the sample-memb
104                                    Chromatin boundary elements or insulators are believed to regulate
105                                              Boundary elements or insulators subdivide eukaryotic chr
106  here may provide insight into the role that boundary element pairing plays in enhancer blocking both
107 However, unlike any previously characterized boundary element, part of the paired region overlaps wit
108                                              Boundary elements partition eukaryotic chromatin into ac
109 flies are determined by a mechanism in which boundary elements physically pair with their partners, e
110 xpression of UBE3A-ATS in the absence of the boundary element resulted in full repression of paternal
111 omplex extrudes a loop until it encounters a boundary element roadblock, generating a stem-loop.
112                It is believed that insulator/boundary elements separate these domains.
113 contain any known promoter, but it acts as a boundary element separating adjacent segmental domains.
114  suggesting that the transition segments are boundary elements separating chromosomal domains with di
115  state roughly stable, even without explicit boundary elements separating differentially modified chr
116 lization occurs mainly at promoters but also boundary elements such as Mcp, Fab-8, scs and scs', whic
117 late, for adding telomeric repeats, template boundary element (TBE), and pseudoknot, enclosed in a ci
118 onserved region of TER known as the template boundary element (TBE).
119 RNA core domains, i.e. TR template, template boundary element, template proximal helix and Helix IV (
120 ents: a core-enclosing helix (CEH), template-boundary element, template, and pseudoknot, in this orde
121 LeuO functions analogously to the eukaryotic boundary element that delimits the transcriptionally act
122 HS2-6 primarily functions as an insulator or boundary element that may be critical for the autonomous
123 t, Fab-7, has been proposed to function as a boundary element that separates the iab-6 and iab-7 cis
124  suggests that the +45 region functions as a boundary element that separates the Scl/Map17 and Cyp tr
125 ur studies suggest that scs and scs' are not boundary elements that block the propagation of an alter
126                      In an attempt to define boundary elements that could separate these gene cluster
127 thesis is the identification of insulator or boundary elements that delimit chromosomal domains.
128  It has been suggested that scs and scs' are boundary elements that delimit this decondensed chromati
129 t the identification and characterization of boundary elements that flank the transcriptionally repre
130 horax complex, making Fab-7 one of the first boundary elements that is known to have an essential fun
131               It is composed of two kinds of boundary elements; the first, functional boundary is an
132 lated from its neighbor by poorly understood boundary elements thought to be conserved across cell ty
133 atic regions and acts synergistically with a boundary element to prevent the spread of heterochromati
134 epeats flanking the silent interval serve as boundary elements to mark the borders between heterochro
135                            In contrast, this boundary element was dispensable for cytokine regulation
136 tein interaction might facilitate pairing of boundary elements, we find that that scs and scs' are in
137 ions between enhancers and promoters) and at boundary elements (which demarcate regions of distinct c
138                       Interestingly, the two boundary elements, which are inserted approximately 10 k
139  resulting domain can be simply regulated by boundary elements, which halt the progress of the extrus
140 gement of FACT with heterochromatin requires boundary elements, which position the heterochromatic do
141 ive tessellation of the molecular surface by boundary elements with non-regular size to solve the Poi
142                    Deletion of the chromatin boundary element Yta7 led to increased Rtt106:H3 binding

 
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