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1 cDNA microarray analysis of TNBC cells stably integrated
2 cDNA microarray data were collected both from patients e
3 cDNA studies demonstrated that the c.1014+1G>A variant c
4 cDNA with 5 A's may yield novel Gag product(s), while cD
5 cDNA-TCR beta-chain libraries were sequenced from 2 mill
6 cDNAs were constructed by site-directed mutagenesis that
7 -hsa-anti-miR-34a or -449a or through PACS-1 cDNA transfection led to the reversal of DNA damage resp
9 ect as low as 200 ymol, corresponding to 120 cDNA molecules of L-gene Ebola virus with a limit of det
10 , WPMIAS supports 64 plant species with ~200 cDNA libraries and 274 pre-loaded plant degradome datase
12 virus that delivers human interferon alfa-2b cDNA into the bladder epithelium, and a novel intravesic
13 uence through recombination of the 5' and 3' cDNAs, leading to the durable restoration of otoferlin e
15 g enzymes prior to rapid amplification of 5' cDNA ends (5' RACE) for HIV-1 RNA and quantitative rever
19 at a single intraperitoneal inoculation of a cDNA clone encoding an attenuated rZIKV was safe, highly
22 cy (SCID-X1) using targeted integration of a cDNA into the endogenous start codon to functionally cor
27 cells that were modified with the human ADA cDNA (MND-ADA) gamma-retroviral vector after conditionin
28 f iCLIP and related methods that can amplify cDNAs that truncate at crosslink sites and we show that
31 next-generation (nextGen) paired-end DNA and cDNA sequencing as input, call on several well establish
33 mediated by the Ty3 intasome complex (IN and cDNA) is subject to inputs from a combination of host fa
34 via recombination between such plasmids and cDNA copies of capsid genes of eukaryotic positive-sense
35 encing with methylation-specific primers and cDNA analysis in patient neurons indicated selective exp
36 c 346 kb inversion in multiple probands, and cDNA sequencing and a splicing assay established that tw
39 RNA-mediated genomic modifications: RNA- and cDNA-templated DSB repair (R-TDR and c-TDR) using an RNA
42 sing a CAV1 scaffolding domain construct and cDNAs encoding wild-type CAV1, and CAV1 phosphorylation
43 noma cells (SK-MEL-28) transfected with APCN cDNA acquired the ability of invasive growth in semisoli
47 nts based on expression technologies such as cDNA microarrays, RNA-Seq, and cell imaging-based assays
49 (ATF4) and overexpression of exogenous ATF4 cDNA indicated that ATF4 up-regulates LAMP3 mRNA levels.
50 identify samples and cells, and the barcoded cDNAs are pooled into a library pool before high through
53 ta vector encoding the human interferon-beta cDNA (hIFNbeta) was used to transduce human melanoma cel
55 the AG haplotype also results in greater blw cDNA expression and a significant decrease in lifespan r
56 e explored the genetic diversity of 125 Bm86 cDNA gene sequences from R. microplus from 10 endemic ar
58 ysis of finger millet (Eleusine coracana) by cDNA subtraction identified drought responsive genes tha
59 seq (DNA-RNA immunoprecipitation followed by cDNA conversion coupled to high-throughput sequencing),
62 is of PREX1 mRNA expression in breast cancer cDNA arrays and a METABRIC cohort revealed that higher P
63 ybrid screenings of placenta and lung cancer cDNA libraries, which demonstrated that the long IDR lin
65 en using dysbindin as bait against a cardiac cDNA library to identify the cardiac dysbindin interacto
66 TALEN technology and a 7bp deletion in CERKL cDNA that caused the premature termination of CERKL.
67 nsfection with increasing amounts of WT-CFTR cDNA progressively increased SLC26A9 levels in F508del-C
69 n, we cloned and biochemically characterized cDNA encoding CBS from T. gondii (TgCBS), which represen
70 the endogenous fusion protein or a chimeric cDNA leads to the formation of indolent liver tumors in
73 sgene, TgAC1, consisting of Clrn1-UTR (Clrn1 cDNA including its 5' and 3' UTR) under the control of r
74 lin-like peptide cloned from the Aplysia CNS cDNA replicated both the enhancement of synaptic transmi
75 m gene addition studies using protein-coding cDNAs to the modulation of gene expression using small R
77 now find that this is caused by constrained cDNA-ends, which can result from the sequence and struct
78 d a functional genomic screen using a cotton cDNA library in a virus-induced gene silencing (VIGS) ve
80 actin remodeling processes: wild-type DAAM2 cDNA, but not cDNA representing missense variants found
81 support the concept of retroelement-derived cDNA as key triggers of systemic autoimmunity in Trex1-d
82 t relies on the acquisition of viral derived cDNA (vDNA) and how this pathway discriminates between s
85 hput method, we developed a T7 phage display cDNA library derived from mRNA isolated from bronchoalve
86 of genomic DNA (gDNA) and complementary DNA (cDNA) and metatranscriptomics to investigate how the acq
87 is undertaken by deriving complementary DNA (cDNA) from puromycin-treated patient lymphoblasts, hybri
89 rand synthesis to recover complementary DNA (cDNA) molecules that were successfully reverse transcrib
91 ngle-molecule full-length complementary DNA (cDNA) sequencing can aid genome annotation by revealing
92 y noted, the positions of complementary DNA (cDNA)-starts depend on cDNA length in several iCLIP expe
93 beta polypeptide (ATP7B) complementary DNA (cDNA; AAV8-ATP7B) is able to provide long-term copper me
95 ions were found in CD247 complementary DNAs (cDNAs) cloned from the patient as well as in cDNA and ge
97 d loss-of-function screens using a human DUB cDNA library of 65 genes and an siRNA library of 98 gene
98 und by a deletion signature generated during cDNA synthesis after bisulfite treatment for which the c
100 hodology to (1) select only human RNA during cDNA synthesis by aiming at the poly(A)+-tail and (2) in
102 a unique molecular identifier (UMI) to each cDNA molecule to improve the accuracy of repertoire-freq
103 he development of a relatively fast and easy cDNA-based system for the semi high-throughput functiona
106 PSE, which are orthologs of M-IPSE, from egg cDNA of S. haematobium Using PCR and immunodetection, we
107 unya fever (CHIKF) pandemic, we used an EILV cDNA clone to design a chimeric virus containing the chi
110 iopsies were taken and total RNA extraction, cDNA synthesis and PCR was performed using 10 candidate
112 tected in less than 2 h without the need for cDNA synthesis or any other enzymatic reactions and with
116 adaptor ligation, followed by fragmentation, cDNA generation, PCR amplification, and deep sequencing.
118 rt a system that is able to rescue HAZV from cDNAs, thus permitting reverse genetic interrogation of
119 notypes that cannot be rescued by functional cDNA expression, suggesting that RPS25 loss elicits a ce
121 addition, supplementation of the target gene cDNA into the otocysts of homozygous Slc24a4 knockout mi
122 me PCR assays for human erythropoietin gene, cDNA or transcript, we found that inclusion of yeast RNA
123 utated to alanine using a type A full-genome cDNA clone, and the virus progeny was analyzed for defec
126 gene-expression profiling using whole genome cDNA-mediated annealing, selection, extension, and ligat
128 related recombination mechanisms and genomic cDNA-like sequences that implicate evolutionary origins
133 to perform a functional screening of a human cDNA library, looking for cDNAs able to rescue yeast gro
137 cDNAs) cloned from the patient as well as in cDNA and genomic DNA from other individuals, suggesting
138 iation and mismatches of alleles detected in cDNA and gDNA suggesting that some loci have undergone p
140 ice genotype (Hasawi), a salt-stress-induced cDNA expression library was constructed and subsequently
142 aring the 197-aa deletion from an infectious cDNA clone of the highly virulent PEDV PC22A strain (inf
143 WV, we designed a series of novel infectious cDNA clones corresponding to coexisting DWV genotypes, t
145 SpISO-seq requires less than 1 ng of input cDNA, limiting or removing the need for prior amplificat
146 ned and characterized Lavandula x intermedia cDNAs encoding geranyl diphosphate synthase (LiGPPS), ge
147 d quality, and then reverse transcribed into cDNA before being subjected to real-time qRT-PCR analysi
148 (sequencing of RNA reverse transcribed into cDNA) and found that neurogenesis and haematopoiesis dom
149 ides is efficiently reverse transcribed into cDNA, and we develop an assay to measure the combined fi
150 ntrol groups) for reverse transcription into cDNA, preamplification and then real time quantitative p
156 FN-I response is triggered by cytoplasmic L1 cDNA, and is antagonized by inhibitors of the L1 reverse
157 k (-/-) mice in vivo with both Pjvk and Lc3b cDNAs completely restored sound-induced pexophagy, fully
158 We first constructed a stable full-length cDNA clone of ZIKV in a novel linear vector from which i
162 We report nanopore sequencing of full-length cDNA from CLL samples with and without SF3B1 mutation, a
165 re, we generated over 10,000,000 full-length cDNA sequences at a median accuracy of 97.9% using our n
166 (1) show that deep and accurate full-length cDNA sequencing can be used to provide isoform-level tra
167 fication of cDNA ends (RACE) and full-length cDNA sequencing, revealed four independent promoters, pr
168 equences of natural Rhi o 2, the full-length cDNA was cloned, and expressed as recombinant (r) allerg
169 e isolated and characterized the full-length cDNA, gDNA and a putative promoter of a RIOK-2 protein k
171 and Pacific Biosciences (PacBio) full-length cDNAs to identify 104,091 high-confidence protein-coding
172 ntiviral complementation with wild-type MDH2 cDNA restored MDH2 levels and mitochondrial MDH activity
173 ecome the gold standard technique to measure cDNA and gDNA levels but the resulting data can be highl
175 hybridization-based targeted RNA-Seq method, cDNA-smMIPs are a cost-effective high-throughput tool fo
176 lysis of human RCC tumor tissue microarrays, cDNA arrays and tumor biopsy samples demonstrated V2R ex
178 ion pipelines by integrating single-molecule cDNA-sequencing data generated from either the Pacific B
179 enerated recombinant proteins from the mouse cDNAs encoding the Hsp90alpha-Delta and wild-type Hsp90a
181 ns, most of which were supported by multiple cDNA evidence (72%) while only 20% of them have coding c
182 nes RNA barcoding and generation of multiple cDNA copies per RNA molecule to eliminate errors introdu
183 leotides (+CCC) to the 3'-end of the nascent cDNA, which can then anneal to the matching rGrGrG 3'-en
184 ntiviral transduction with wild-type NDUFAF8-cDNA ameliorated both the assembly defect and the bioche
185 ing processes: wild-type DAAM2 cDNA, but not cDNA representing missense variants found in individuals
187 licing patterns using rapid amplification of cDNA ends (RACE) and full-length cDNA sequencing, reveal
188 A were verified by 3' rapid amplification of cDNA ends (RACE) and Northern blot analyses in several E
189 HBV DP-rcDNA by 5'/3' rapid amplification of cDNA ends (RACE), 5' radiolabeling, and exonuclease dige
193 re sequencing on RNA (rapid amplification of cDNA ends-based repertoire sequencing [RACE-RepSeq]), we
195 sequencing based on the massive analysis of cDNA ends approach, which was validated using high-throu
199 g of single cells into plates, generation of cDNA libraries, a TCR-specific amplification step, a sec
201 y annotated using morphological profiling of cDNA constructs, via a microscopy-based Cell Painting as
202 at enable highly multiplexed resequencing of cDNA target regions of approximately 100 nucleotides and
203 activation domain of YAP1, and sequencing of cDNA from the patient shows it does not result in nonsen
205 eloped kinetic cross-linking and analysis of cDNAs (chiCRAC), an ultraviolet cross-linking method tha
206 reported the functional characterization of cDNAs encoding short-chain isoprenyl diphosphate synthas
208 us-based system allows the overexpression of cDNAs of up to 2,100 nucleotides (encoding a protein of
209 contrast, we show that a broad size range of cDNAs in iCLIP allows the cDNA-starts to efficiently del
210 matics, we performed long-read sequencing of cDNAs from Arabidopsis (Arabidopsis thaliana) lines defi
211 s required for the efficient catalysis of (-)cDNA synthesis during viral infection before capsid unco
212 of complementary DNA (cDNA)-starts depend on cDNA length in several iCLIP experiments and we now find
216 n of AAV particles harboring codon-optimized cDNAs encoding HLA-G1 and HLA-G5 isoforms one week prior
217 RISPR/Cas9-mediated loss of function and ORF/cDNA driven rescue screens, and cell-based models of spo
218 hylogenetic analysis revealed 20 OsPLDalpha1 cDNA variants which further translated into 12 protein v
219 entified gencDNAs have similarities to other cDNA-like sequences existing throughout phylogeny, inclu
220 ' and the other the 3' portions of otoferlin cDNA, which exceed the packaging capacity of the AAV whe
221 -/-) mutant mice reconstituted the otoferlin cDNA coding sequence through recombination of the 5' and
224 ls of peroxisome proliferation, whereas Pjvk cDNA alone yielded only a partial correction of the defe
225 lant species, two class III patatin-like PLA cDNAs (pPLAIIIbeta or pPLAIIIdelta) from castor or Physa
226 erent graft combinations was used to prepare cDNA libraries for small RNA sequencing and to analyze m
227 single-molecule molecular inversion probes (cDNA-smMIPs) that enable highly multiplexed resequencing
229 s vector delivering murine or human proSFTPB cDNA into SP-B deficient mice restores surfactant homeos
230 body-producing B cell clones at the protein, cDNA and gDNA levels, we characterized additional LAIR1
232 We deduced the full-length of the RBM28 cDNA sequence and profiled its expression patterns detec
233 tion pipeline utilizing short- and long-read cDNA sequencing, protein evidence, and ab initio predict
234 RACRs, particularly those carrying a recoded cDNA-restoring endogenous gene activity, can drive relia
240 our previously described infectious ZIKV-RGN cDNA clone, we identified a natural polymorphism in the
242 In vivo assays show that this hybrid RNA-cDNA molecule is required for mutagenic transposition, r
243 ughput methods to study the effects of RNAi, cDNA, and chemical libraries, have evolved to encompass
245 activity in cells transfected with SERPINB7 cDNA carrying the mutation and promoted full-length SERP
246 .myc to drive expression of the human SH3TC2 cDNA under the control of the Mpz promoter specifically
247 of 468 single cells and 1297 matched single cDNA samples, performing SMARTer and Smart-seq2 protocol
248 d dimers of the Broccoli aptamer into a SINV cDNA clone using sites in nsP3 (genomic RNA), the 3'UTR
250 of p22phox as bait to screen a human spleen cDNA library, we identified the protein interacting with
251 idic device to synthesize and deliver stable cDNA for downstream gene expression analysis, thereby al
252 nstrated that nanoparticle delivery of STAT3 cDNA into the neonatal circulation restored endothelial
254 against the constriction region, subsequent cDNA strand insertion inside the nanopore's beta-barrel
255 erent ratios of rat alpha4 and beta2 subunit cDNA were transfected into human embryonic kidney 293 ce
257 ng technology combined with Primer ID-tagged cDNA primers to efficiently quantify HIV-1 splicing at a
258 n-chip hybridization of complementary target cDNA) is decreased with increasing the ionic strength of
259 ibed Valpha3.2 Vbeta14 T cell receptor (TCR) cDNAs, the dominant clonotype generated in splenocytes a
262 road size range of cDNAs in iCLIP allows the cDNA-starts to efficiently delineate the complete RNA-bi
265 reated patient lymphoblasts, hybridizing the cDNA to the BROCA panel of tumor suppressor genes, and t
266 s gene expression and it was proved that the cDNA fragment was relevant to the cellulose biosynthesis
267 tomato phytaspase genes were identified, the cDNAs were cloned and the recombinant enzymes were obtai
271 ded RNA from 312 maize cobs was converted to cDNA, and sequences were determined using an Illumina Hi
274 uplexes via a linker; reverse transcription; cDNA library amplification; and finally high-throughput
277 plification (Ct values <= 35 for unamplified cDNA) had to be replaced by (3) proofing linear pre-ampl
278 A-seq library preparation to remove unwanted cDNA from 16s ribosomal rRNA without increasing the numb
280 scanning (DMS) strategy(2-5) whereby a viral cDNA library was constructed containing all codon substi
281 nvestigate their role using a cochlear viral cDNA transfer approach in vivo, where IHCs of mouse lack
283 iting HIV-1 replication by deaminating viral cDNA cytosines and interfering with reverse transcriptio
286 ugh the combined effects of inhibiting viral cDNA production and cytidine-to-uridine-driven hypermuta
288 After next-generation RNA sequencing, viral cDNA clones mimicking the enterovirus RNA sequences foun
292 ce in situ hybridization with a set of wheat cDNAs allowed the macrostructure and cross-genome homoeo
294 5 A's may yield novel Gag product(s), while cDNA with an extra base, 7 A's, may only be a minor cont
295 7 nAChRs with NACHO, we utilized genome-wide cDNA library screening and discovered that several anti-
297 nels, we employed HEK cells transfected with cDNAs encoding three requisite receptor subtypes: alpha7
298 irect delivery in mice of an infectious ZIKV cDNA clone allows the rescue of recombinant (r)ZIKV in v
299 , the mutants carrying the transgenic ZmNLP5 cDNA fragment significantly increased the nitrate conten