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1 as the reduced form of nicotinamide adenine dinucleotide.
2 ation with removal of methyl groups from CpG dinucleotides.
3 to various pathogens through sensing cyclic dinucleotides.
4 ls, to transport cGAMP and other 2'3'-cyclic dinucleotides.
5 with a central CpG/CpG and two outer CpA/TpG dinucleotides.
6 and out of phase with SS (where S is G or C) dinucleotides.
7 E7) mutants with elevated frequencies of UpA dinucleotides.
8 TT in UPD-Seq reads at different original TC dinucleotides.
9 6mA and all symmetric methylation at the ApT dinucleotides.
10 ut does not cleave the corresponding reduced dinucleotides.
11 methylation in many of the cytosine-guanine dinucleotides.
12 Surprisingly, ZCWPW1 also recognises CpG dinucleotides.
13 y host-derived or bacterially derived cyclic dinucleotides.
14 owing treatment with the noncanonical cyclic dinucleotide 2',3'-cGAMP, suggesting that the STING path
16 enzymatic preparation of 2'-5',3'-5'-cyclic dinucleotides (2'3'CDNs) with use of cyclic GMP-AMP synt
17 ydroxymethylation occurs predominantly in CA dinucleotides (5hmCA) and it accumulates in regions flan
18 tive contributions of mutations at canonical dinucleotides (73%) and flanking noncanonical positions
21 cterial infection in mammalian cells, cyclic dinucleotide activation of STING induces interferon beta
23 pplied to the stereoselective preparation of dinucleotide analogues featuring either a difluorophosph
24 in the biosynthesis of nicotinamide adenine dinucleotide and its derivatives in all organisms that s
25 reased NAD+ synthesis-nicotinic acid adenine dinucleotide and methyl nicotinamide-were elevated in sk
26 typical FMO aspects with the flavin adenine dinucleotide and NAD(P)H binding domains and a C-termina
27 d loss of intracellular nicotinamide adenine dinucleotide and nicotinamide adenine dinucleotide + hyd
28 interaction between the guanine base of the dinucleotide and the vacant G-triad, which acts as an an
30 posure induced changes in DNAm at 27,812 CpG dinucleotides and in the expression of 3,857 transcripts
31 , in eukaryotes 5mC is most prevalent at CpG dinucleotides and is frequently associated with transcri
32 rically methylated and hydroxymethylated CpA dinucleotides and that this alternative binding selectiv
33 vely inhibits HIV-1 containing clustered CpG dinucleotides and this requires ZAP and its cofactor TRI
35 DH (the reduced form of nicotinamide adenine dinucleotide) and FAD (flavin adenine dinucleotide) in v
37 nto major grooves and SS (where S is G or C) dinucleotides are often found at sites that bend into mi
42 nt oxidation of reduced nicotinamide adenine dinucleotide as the final step in the glycolytic pathway
45 onses from both redox state and nicotinamide dinucleotide availability to regulate carbon fixation.
46 tion such as k-tuple nucleotide composition, dinucleotide-based auto covariance and global informatio
49 udies suggest that beta-nicotinamide adenine dinucleotide (beta-NAD) is an important inhibitory motor
51 nosine triphosphate and nicotinamide adenine dinucleotide, both pathways converging in the formation
53 (A) microsatellite at the BAT-26 locus and a dinucleotide (CA) microsatellite in the coding region of
54 genomes, particularly brain, the CpG and CpA dinucleotides can be methylated at the 5-position of cyt
55 frequency of CpG dyads (two complementary CG dinucleotides) can be only indirectly inferred by overla
59 e cytosol by cGAS, which produces the cyclic dinucleotide (CDN) second messenger cGAMP to activate th
61 ng adjuvant target due to its role in cyclic dinucleotide (CDN)-driven anti-viral immunity; however,
62 mic administration of cGAMP and other cyclic dinucleotides (CDN), but little is known about how nanoc
67 ecombinant DENV NS1 administered with cyclic dinucleotides (CDNs), potent activators of innate immune
68 ant intracellular dsDNA producing the cyclic dinucleotide cGAMP, a second messenger initiating cytoki
69 synthase (cGAS) and generation of the cyclic dinucleotide cGAMP, followed by the induction of stimula
70 cGAS catalyzes the production of the cyclic dinucleotide cGAMP, resulting in type I interferon respo
71 nucleotide (d(AG)) and the other to a cyclic dinucleotide (cGAMP), are solved using NMR spectroscopy.
73 T3-ITD N-regions have a G/C content (66.9%), dinucleotide composition (P < .001), and length characte
74 that the antiviral protein ZAP recognizes CG dinucleotide composition to differentiate self from non-
76 horylation, diminishing nicotinamide adenine dinucleotide concentrations and impairing cytokine produ
79 mammalian cells by virtue of its elevated CG dinucleotide content compared with endogenous mRNAs.
80 within the CpG (cytosine-phosphate-guanine) dinucleotide context across the genome using Maximum Lik
82 surveying more than 400 000 cytosine guanine dinucleotide (CpG) sites measured from peripheral blood
83 c variants disrupting DNA methylation at CpG dinucleotides (CpG-SNP) provide a set of known causal va
84 on was assessed at >400,000 cytosine-guanine dinucleotides (CpGs) in whole blood or CD14+ monocytes u
85 ify associations at 720,077 cytosine-guanine dinucleotides (CpGs), with adjustment for maternal age,
87 r that catalyses the synthesis of the cyclic dinucleotide cyclic GMP-AMP, which mediates the inductio
88 -quadruplex structure, one bound to a linear dinucleotide (d(AG)) and the other to a cyclic dinucleot
89 omplex I (Ndufs1, NADH [nicotinamide adenine dinucleotide] dehydrogenase [ubiquinone] iron-sulfur pro
91 n 1 (SIRT1), an NAD(+) (nicotinamide adenine dinucleotide)-dependent deacetylase in the proximal tubu
93 genome analysis indicates unusually low CpG dinucleotide depletion in KYAV compared to other ledante
95 n and synthesis of an ITPA-specific chimeric dinucleotide (DIAL) that replaces the pyrophosphate leav
98 he riboflavin (RF) cofactors, flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN), are
100 e LSDl (KDMlA) belongs to the flavin adenine dinucleotide (FAD) dependent family of monoamine oxidase
101 S sensor, which used DET-type flavin adenine dinucleotide (FAD) dependent glucose dehydrogenase (GDH)
103 enine dinucleotide (NADH), and flavin denine dinucleotide (FAD) in fresh brain samples of a mouse mod
104 y attach to the LSD1 cofactor flavin adenine dinucleotide (FAD) to inhibit demethylase activity, SP-2
105 l structures of the catalytic flavin adenine dinucleotide (FAD)- and heme-binding domains of Cylindro
107 sidue Cys108 and its cofactor flavin adenine dinucleotide(FAD), and prompts VVD switching from Dark s
108 that taking into account position-dependent dinucleotide features improved the design of effective s
111 (A/G)-CANNTG-3', with an added outer Cp(A/G) dinucleotide; for example in the promoter for CNIH3, a g
114 ters, this results from an elevated 5'-GG-3' dinucleotide frequency and GC enrichment near transcript
118 remixing of FDHs with reduced flavin adenine dinucleotide generally results in abolishment of C4aOOH-
119 an Aspergillus flavus-derived flavin adenine dinucleotide glucose dehydrogenase (AfGDH) and an electr
121 Codon-optimized RSV F containing fewer CpG dinucleotides had higher F expression, replicated more e
123 , DNA methylation predominantly occurs at CG dinucleotides however, widespread non-CG methylation (mC
125 iction and demonstrate that this 5'-hydroxyl dinucleotide hydrolase (HDH) activity for DXO is higher
126 es by methylation of the C-phosphate-G (CpG) dinucleotide in DNA is essential for their long-term acc
128 nsible for depletion of nicotinamide adenine dinucleotide in its oxidized form (NAD(+)) during Waller
130 gnition domain (TRD loop) recognizes the CpG dinucleotides in a +1 flanking site-dependent manner.
136 ation at over 400 000 CpGs (cytosine-guanine dinucleotides) in 5 population-based cohorts including 6
137 re, it was also shown that GNA nucleotide or dinucleotide incorporation increases resistance against
138 Variants affecting essential splice-site dinucleotides inhibit splicing, whereas the impact of va
142 To explore this conundrum, we varied this AU dinucleotide into all possible permutations and analyzed
144 n, which mostly occurs in the context of CpG dinucleotide, is installed by two denovo DNA methyltrans
145 red H3K27me3 spreading from cytosine guanine dinucleotide islands, which is reminiscent to the report
146 quence (e.g., codon usage, codon pair usage, dinucleotide/junction dinucleotide usage, RNA structure
147 preferentially catalyzes RNA cleavage at UN dinucleotide junctions (k(obs) = 0.9 h(-1) for UU cleava
148 outperform genomic signatures defined at the dinucleotide level in distinguishing between taxonomic s
149 ccompanied this pattern, particularly at CpG dinucleotides located within binding or flanking regions
151 ressive association of DNA methylation at CG dinucleotides (mCG), mCH accumulates on Xi in domains wi
153 formation in the first exon promoted by CpG dinucleotide methylation as a regulator of hTERT express
154 els of 3 metabolites, nicotinic acid adenine dinucleotide, methylnicotinamide, and N1-methyl-4-pyrido
155 3TG-3'(where the numbers indicate successive dinucleotides), modification of the central E-box 2CG ha
156 incorporated into mRNA, the CCl2-substituted dinucleotide most efficiently promoted cap-dependent tra
157 ) for the NA group of nicotinic acid adenine dinucleotide (NAAD) inside endolysosomes of interleukin
158 synthesis, converting nicotinic acid adenine dinucleotide (NaAD) to NAD(+) Some members of the NadE f
159 dence suggests that the nicotinamide adenine dinucleotide (NAD(+) ) precursor nicotinamide riboside (
160 carboxylic acid cycle, OX-PHOS, nicotinamide dinucleotide (NAD(+) ) synthesis, and reversed the defec
161 lyses the hydrolysis of nicotinamide adenine dinucleotide (NAD(+)) and is a candidate molecule for re
162 cap, a non-canonical 5' nicotinamide adenine dinucleotide (NAD(+)) cap can tag certain transcripts fo
167 dative stress response, nicotinamide adenine dinucleotide (NAD(+)) is emerging as a metabolic target
170 hat exogenously applied nicotinamide adenine dinucleotide (NAD(+)) moves systemically and induces sys
175 volutionarily conserved nicotinamide adenine dinucleotide (NAD(+)) synthase and neuroprotective facto
176 Mitochondria require nicotinamide adenine dinucleotide (NAD(+)) to carry out the fundamental proce
177 ribosyltransferases use nicotinamide adenine dinucleotide (NAD(+)) to modify target proteins with ADP
178 cellular production of nicotinamide adenine dinucleotide (NAD(+)) via nicotinamide phosphoribosyltra
179 utonomous generation of nicotinamide adenine dinucleotide (NAD(+)) via the kynurenine pathway (KP) re
180 Supplementation of nicotinamide adenine dinucleotide (NAD(+)) with nicotinamide riboside partial
181 s the main precursor of nicotinamide adenine dinucleotide (NAD(+)), a coenzyme essential for DNA repa
186 AIMS: The mitochondrial nicotinamide adenine dinucleotide (NAD) kinase (NADK2, also called MNADK) cat
187 kout mice display lower nicotinamide adenine dinucleotide (NAD) levels, and an imbalance in the NAD m
190 KYNU, two genes of the nicotinamide adenine dinucleotide (NAD) synthesis pathway, are causative of c
192 eported the presence of nicotinamide adenine dinucleotide (NAD)-capped RNAs in mammalian cells and a
193 ), one of the mammalian nicotinamide adenine dinucleotide (NAD)-dependent lysine deacylases, catalyze
196 h as PARPs that utilize nicotinamide adenine dinucleotide (NAD+) as a cofactor to transfer monomer or
197 evels of the redox coenzyme nicotine adenine dinucleotide (NAD+), elevated total intracellular ATP le
200 ne nucleotides (AMP, ADP, and ATP), pyridine dinucleotides (NAD(+) and NADH), and short-chain acyl-Co
201 ction by downregulating nicotinamide adenine dinucleotide(+) (NAD(+))/reduced form of nicotinamide ad
202 (PCET) reaction between nicotinamide adenine dinucleotide (NADH) and a protein-bound flavin (FMN) cof
203 ), tryptophan residues, nicotinamide adenine dinucleotide (NADH) and vitamin A were scanned on sturge
204 of tryptophan, reduced nicotinamide adenine dinucleotide (NADH), and flavin denine dinucleotide (FAD
205 lly oxidizes 1,4-dihydronicotinamide adenine dinucleotide (NADH)-an important coenzyme in living cell
207 activity, elevating the nicotinamide adenine dinucleotide (NADH/NAD(+)) ratio and decreasing expressi
208 e levels, disrupted the nicotinamide adenine dinucleotide (NADH/NAD(+)) ratio, and decreased intracel
209 duction rate of reduced nicotinamide adenine dinucleotides (NADH) from 91 potential energy substrates
210 NOCT specifically and directly converts the dinucleotide NADP(+) into NAD(+) and NADPH into NADH.
212 ore, sA3G was shown to bind a deoxy-cytidine dinucleotide near the catalytic Zn(2+), yet not in the c
213 alter RNA splicing, and 13 essential splice dinucleotide, nonsense, and short insertion or deletion
214 eplication in mutants with increased CpG/UpA dinucleotides occurred immediately after viral entry, wi
215 CXXC family, which binds to unmethylated CpG dinucleotides of DNA and through enzymatic activities fo
216 NYN eliminated the deleterious effect of CpG dinucleotides on HIV-1 RNA abundance and infectious viru
217 ono- and bicistronic constructs, and CpG/UpA-dinucleotide optimization of reporter genes allowed repl
218 e tryptophan-kynurenine-nicotinamide adenine dinucleotide (oxidized; NAD+) pathway is closely associa
219 ningitidis-Nme2Cas9-that recognizes a simple dinucleotide PAM (N(4)CC) that provides for high target
220 lish that our hybrids can target all adenine dinucleotide PAM sequences and possess robust and accura
223 hereas the NOX2 (NADPH [nicotinamide adenine dinucleotide phosphatase] oxidase subunit 2) and NOX4 (N
224 nit 2) and NOX4 (NADPH [nicotinamide adenine dinucleotide phosphatase] oxidase subunit 4) were upregu
227 nicotinamide moiety of nicotinamide adenine dinucleotide phosphate (NADP(+) ) for the NA group of ni
229 loiting this principle, nicotinamide adenine dinucleotide phosphate (NADPH) and NADP(+) are cycled ra
230 f dFB neurons through a nicotinamide adenine dinucleotide phosphate (NADPH) cofactor bound to the oxi
231 sis and regeneration of nicotinamide adenine dinucleotide phosphate (NADPH) in p53-deficient cancer c
232 ng power in the form of nicotinamide adenine dinucleotide phosphate (NADPH) is required to mitigate o
233 emia linked to impaired nicotinamide adenine dinucleotide phosphate (NADPH) production and imbalanced
235 tration of glutathione, nicotinamide adenine dinucleotide phosphate (NADPH), and nicotinamide adenine
236 ficantly higher reduced nicotinamide adenine dinucleotide phosphate levels, reduced reactive oxygen s
237 ignalling axis and that nicotinamide adenine dinucleotide phosphate oxidase (NOX)-dependent ROS produ
239 ations are prominent, including nicotinamide dinucleotide phosphate oxidase defects in chronic granul
242 These pathways include nicotinamide adenine dinucleotide phosphate oxidase, which generates microbic
246 te the possible role of nicotinamide adenine dinucleotide phosphate reduced form oxidases (NOXs) in M
247 n by generating reduced nicotinamide adenine dinucleotide phosphate to enhance biosynthesis and by re
248 ) (the oxidized form of nicotinamide adenine dinucleotide phosphate) complexes of SARM1 and plant NLR
249 NADPH (reduced form of nicotinamide adenine dinucleotide phosphate) oxidase-dependent killing and, i
250 nosine triphosphate and nicotinamide adenine dinucleotide phosphate, and have become attractive bioca
251 kers of senescence, and nicotinamide adenine dinucleotide phosphate, reduced form oxidases (NOXs) wer
252 lcholinesterase (AChE), nicotinamide adenine dinucleotide phosphate-diaphorase (NADPH-d), glutamic ac
253 cell therapy decreased nicotinamide adenine dinucleotide phosphate-oxidase 2 and inducible nitric ox
254 vity, cellular oxidized nicotinamide adenine dinucleotide phosphate/NADPH levels, phagocytic reactive
255 fluorescence of reduced nicotinamide adenine dinucleotide (phosphate) (NAD(P)H) and flavin adenine di
256 autofluorescent reduced nicotinamide adenine dinucleotide (phosphate), NAD(P)H, has been previously e
257 sively mobilized by nicotinic acid adenosine dinucleotide-phosphate (NAADP): both Ca(2+) mobilization
258 r with increased NADPH (nicotinamide adenine dinucleotide phosphateoxidase) activity and mitochondria
259 tern, namely anti-WW/SS pattern, in which WW dinucleotides preferentially occur at DNA sites that ben
260 As via endonucleolytic cleavage at CA and UA dinucleotides, preferentially at scissile bonds located
261 at, in adult mouse cells, hypomethylated CpG dinucleotides preserve a nearly complete archive of tiss
263 ce-derived features, such as sparse profile, dinucleotide profile, position weight matrix profile, Ma
265 tathione (GSH/GSSG) and nicotinamide adenine dinucleotide reduced/oxidized forms (NADH/NAD(+)) are cr
266 , which generates NADH (nicotinamide adenine dinucleotide, reduced form) from NAD, underlies how ALDH
267 identified 155, 46, and 168 cytosine-guanine dinucleotide regions associated (FDR-P < 0.05) with the
268 ed significantly associated cytosine-guanine dinucleotide regions for 82 transcripts (false discovery
275 synthase (cGAS) and production of the cyclic dinucleotide second messenger 2',3'-cyclic GMP-AMP (cGAM
278 revented explanation of the origin of cyclic dinucleotide signalling in mammalian innate immunity.
279 (S (p) and R (p)) at six different flanking dinucleotide sites, i.e. XT and TX (X = A, C, or G), and
280 w database to include genomic codon-pair and dinucleotide statistics of all organisms with sequenced
281 structing candidate chains in representative dinucleotide steps and refining the models against SAXS
282 es are seen in the base stacking of pairs in dinucleotide steps, arising from energetically favorable
286 activation of the recently discovered cyclic dinucleotide synthetase cGAS and the cyclic dinucleotide
287 es, oligonucleotides having 5'TC3' or 5'CT3' dinucleotide target sites, and different flanking bases
289 or in human cells that senses foreign cyclic dinucleotides that are released during bacterial infecti
290 with ~10-bp periodic WW (where W is A or T) dinucleotides that oscillate in phase with each other an
291 s acetolactate synthase, is a flavin adenine dinucleotide-, thiamine diphosphate- and magnesium-depen
292 ective receptors that allow these two cyclic dinucleotides to control very different biological funct
293 erapeutic opportunities, ranging from cyclic dinucleotides to genome methylation inhibitors, angiogen
294 ibonuclease REXO2 degrades mitochondrial RNA dinucleotides to prevent RNA-primed transcription at non
295 terised, whether an analogous process drives dinucleotide underrepresentation in plant viruses remain
296 age, codon pair usage, dinucleotide/junction dinucleotide usage, RNA structure around the frameshift
297 bs cycle to generate NADH and flavin adenine dinucleotide, which are further oxidized by the respirat
298 s and depletes cellular nicotinamide adenine dinucleotide, which leads to mitochondrial dysfunction.
299 nical initiation with pyrimidine/purine (YR) dinucleotide, while translation machinery-associated gen
300 methylation of cytosine at the specific CpG dinucleotides will participate in quartet formation, cau
301 ING domains couple the recognition of cyclic dinucleotides with the formation of protein filaments to