コーパス検索結果 (1語後でソート)
通し番号をクリックするとPubMedの該当ページを表示します
1 op-induced ATR activation requires the MUS81 endonuclease.
2 throughout the genome by the conserved Spo11 endonuclease.
3 tly stimulates DNA cleavage by the MutLgamma endonuclease.
4 -3' exonuclease and secondarily as a 5'-flap endonuclease.
5 hierarchy of sRNA features recognized by the endonuclease.
6 thereby establishing SLFN11 as a novel tRNA endonuclease.
7 critical acidic residues of TerL(lambda) 's endonuclease.
8 used as overlapping genes with a stand-alone endonuclease.
9 ndency of Cas9 to develop a XNA-programmable endonuclease.
10 RFC are sufficient to activate the MutLgamma endonuclease.
11 ates DNA incision by the cognate restriction endonuclease.
12 atically escaped degradation from all tested endonucleases.
13 stently escaping degradation from all tested endonucleases.
14 yotes, where they function as RNA-guided RNA endonucleases.
15 rting modification dependent activity of the endonucleases.
16 lated in cells expressing any of these viral endonucleases.
17 milar to the RuvC family of the RNase H-like endonucleases.
18 of AgeI is novel among Type IIP restriction endonucleases.
22 This presents AP to apurinic/apyrimidinic endonuclease 1 (APE1) that poorly cleaves the AP backbon
23 s less efficiently incised by recombinant AP endonuclease 1 (APE1) when the DNA backbone is facing th
24 drogenase (GAPDH) with apurinic/apyrimidinic endonuclease 1 (Ape1), the major oxidized DNA repair enz
27 zymes DNA polymerase delta (Pol delta), flap endonuclease 1 (FEN1) and DNA ligase I (LigI) that compl
31 the lagging strand and cooperates with flap endonuclease 1 (FEN1) to process the Okazaki fragments f
32 Here we show RAD27/FEN1, which encodes flap endonuclease 1 (FEN1), a structure-specific nuclease wit
33 other mutant screening methods including T7 endonuclease 1 (T7E1), CRISPR/Cas-derived RNA-guided eng
36 on RNA and that human apurinic/apyrimidinic endonuclease 1 incises RNA abasic sites in RNA-DNA hybri
38 donuclease activity of apurinic/apyrimidinic endonuclease 1 is required for the processing of miR-221
39 ssDNA-dependent ATPase, ssDNA binding, ssDNA endonuclease, 5' to 3' ssDNA translocase and 5' to 3' he
40 al enzyme composed of an N-terminal DNA flap endonuclease/5' exonuclease domain (FEN/EXO) and a C-ter
43 aling by Sae2 is mostly independent of Mre11 endonuclease activation but requires Mec1 and Tel1-depen
45 This model explains how both exonuclease and endonuclease activities of Mre11 functionally integrate
46 s, we show that the combined exonuclease and endonuclease activities of recombinant MRX-Sae2 preferen
47 double-strand breaks and has exonuclease and endonuclease activities that help to initiate the repair
49 n a double-flap substrate, which prevents AP endonuclease activity and endonuclease-induced double-st
51 os that are consistent with the data: either endonuclease activity and subsequent error-prone repair
52 all DNA guides depends on both its intrinsic endonuclease activity and the cellular double-strand bre
53 BRCA2-deficient cells require the apurinic endonuclease activity and the PCNA-binding domain of Ape
55 in vitro It is puzzling how such nonspecific endonuclease activity generates primers of appropriate l
56 ut the second first described here, maintain endonuclease activity in the absence of exonuclease acti
58 hese insertions to a null model, in which L1 endonuclease activity is the sole determinant dictating
60 h, that a point mutation that eliminates the endonuclease activity of MLH3 eliminates expansions in a
61 g of phosphorylated CtIP, which promotes the endonuclease activity of MRN, to single long (~50 kb) DN
62 lus subtilis, the interaction stimulates the endonuclease activity of MutL and it is critical for DNA
63 We propose a model for the activation of the endonuclease activity of MutL in organisms lacking methy
65 is a first-in-class inhibitor targeting the endonuclease activity of the virus polymerase acidic (PA
67 nt evidence that Integrator utilizes its RNA endonuclease activity to cleave nascent RNA and drive te
69 distinguished by a broad metal-ion-dependent endonuclease activity with specificity for both RNA and
70 folding or assembly defects and near-normal endonuclease activity, but a ~200-fold reduction in stea
71 aining fusion proteins had very little or no endonuclease activity, despite the presence of a putativ
72 the L protein did not exhibit cap-snatching endonuclease activity, it synthesized RNA in vitro RNA p
73 bond formation, RNA polymerase II has an RNA endonuclease activity, stimulated by TFIIS, which rescue
74 ility and while MLH3 does have an associated endonuclease activity, whether that contributes to repea
85 r acid (S-033447) and inhibits cap-dependent endonuclease, an essential protein involved in the initi
86 ed in participants infected with restriction endonuclease analysis (REA) BI and non-BI strains of C.
88 first demonstration of a non-RNA-guided Cas9 endonuclease and first step towards eliminating the ribo
89 th purified proteins and DNAs along with DNA endonuclease and in vivo integration assays, we show tha
90 henceforth the rixosome), which contains RNA endonuclease and polynucleotide kinase activities with k
92 -stranded breaks made by heterologous I-CeuI endonuclease and the degradation activity of endogenous
94 We induce spike-in DSBs by a site-specific endonuclease and use them to quantify detected DSBs (lab
95 system makes use of two Type IIS restriction endonucleases and corresponding vector sets for efficien
98 king, characterization of inhibition of APE1 endonuclease, and cytotoxicity of cancer cells were used
101 sion repair-associated apurinic/apyrimidinic endonuclease APE1, independent of the BRCA2 status.
104 It has been demonstrated that the minor AP endonuclease APE2 contains only one Zf-GRF motif mediati
105 ularly interspaced short palindromic repeat) endonucleases are at the forefront of biotechnology, syn
106 cerevisiae, galactose-inducible rare-cutting endonucleases are commonly used to create a single DSB a
111 rylated Sae2, along with stimulating the MRX endonuclease as shown previously, also overcomes this in
114 -terminal translocation domain (IUTD) of the endonuclease bacteriocin ColE9 is imported passively acr
115 h3 does not behave like a structure-specific endonuclease but forms polymers required to generate nic
116 e, BRCA2-deficient cells require the 5' flap endonuclease but not the 5'-3' exonuclease activity of F
118 ort palindromic repeats and their associated endonucleases (Cas) are an adaptive immune system that e
120 to reveal the conformational dynamics of the endonuclease Cas9 during its activation toward catalysis
121 ear each other in the structure, forming the endonuclease catalytic center at cosN, the nicking site.
125 apsid protein-transcription factor chimeras; endonuclease chimeras; enzymes for detoxification; antim
132 activation of MUS81-SLX4 structure-specific endonuclease complexes, as well as untimely onset of chr
133 ne SNM1 family and in mRNA 3'-end-processing endonuclease CPSF-73, containing metallo-beta-lactamase
134 cts with FLASH and together they recruit the endonuclease CPSF73 and other polyadenylation factors, f
141 Nature, 2019) identifies features of the RAG endonuclease deemed to be key in supporting this critica
143 ted cell lines expressing redox-deficient or endonuclease-deficient proteins, and APX3330-treated mic
146 , we provide compelling evidence that the L1 endonuclease disproportionately cleaves predominant lagg
147 Structures of Cap4 reveal a promiscuous DNA endonuclease domain activated through ligand-induced oli
150 f ALS-033719, which selectively inhibits the endonuclease domain of influenza virus A and B polymeras
152 pped RNA fragments in close proximity to the endonuclease domain of the RdRp for specific cleavage at
153 mino acid polymorphism at position 26 of the endonuclease domain shared by the PA and PA-X proteins.
154 Our work leads to a model of TerL(lambda) 's endonuclease domain where at least three acidic residues
157 role of Polalpha in nicking through putative endonuclease domains but confirm its indirect role in in
159 substitutions in the polymerase acidic (PA) endonuclease exhibited reduced susceptibility to baloxav
160 ng claw that is flexibly appended to an APE2 endonuclease/exonuclease/phosphatase (EEP) catalytic cor
161 tein (NOC) that is highly conserved with the endonuclease/exonuclease/phosphatase (EEP) domain-contai
162 arity to previously crystallized restriction endonucleases facilitated creation of an energy-minimize
163 one or both DNA strands by a Cas protein, an endonuclease, followed by mending of the DNA by repair m
167 DNA site using a catalytically impaired Cas9 endonuclease fused to an engineered reverse transcriptas
168 In mammals, one such apoptogenic protein is Endonuclease G (EndoG), a conserved mitochondrial nuclea
173 DNA viruses appear to have evolved from HUH endonuclease genes of various bacterial and archaeal pla
174 PR/Cas) system as a programmable, RNA-guided endonuclease has revolutionized the utilization of gene
179 -modification (R-M) systems consist of a DNA endonuclease (HsdR, HsdM and HsdS subunits) and methyltr
181 an 18-base pair recognition site of a homing endonuclease (I-SceI), which is found by chance only onc
182 ioinformatic information and modeling of its endonuclease, identified five residues, D401, E408, D465
183 is study provided the first prediction of an endonuclease in 10 of the 20 viruses examined; the first
185 opies to investigate UvrC, the dual-incision endonuclease in the bacterial nucleotide excision repair
187 og 1 (Mlh1)-postmeiotic segregation 1 (Pms1) endonuclease in the presence of a mispair and a nick 3'
188 m methylase was found in place of the NgoAXI endonuclease in two of the strains, despite being previo
189 NA-seq) upon expression of these herpesviral endonucleases in order to characterize their effect on t
191 onical resolvase activity, implying that the endonuclease incises adjacent to junction branch points
192 lagging strand 3'-hydroxyl groups may prime endonuclease-independent L1 retrotransposition in a Fanc
197 e synthase (iNOS) and S-nitrosylation of the endonuclease inositol-requiring protein 1alpha (IRE1alph
198 proteins requires incorporation of the Ysh1 endonuclease into an eight-subunit "CPF(core)" complex.
208 standing of how genome topology controls RAG endonuclease-mediated assembly of lymphocyte AgR genes.
209 Innate immunity most commonly relies on the endonuclease-mediated cleavage of any incoming DNA that
212 Moreover, we found that knock out of the endonuclease METHYL METHANESULFONATE AND UV SENSITIVE PR
213 ed cleavage site specificity of RNase E, the endonuclease most important for governing mRNA degradati
214 mical specificities, as main actors, the DNA endonuclease MUS81 and the protease WSS1A, and the phosp
215 Cds1 in response to hydroxyurea prevents the endonuclease Mus81 from cleaving the stalled replication
218 recently been reported as another RNA-guided endonuclease of class 2 CRISPR-Cas system, which expands
222 ent induction system to express the yeast HO endonuclease or bacterial restriction enzymes for single
223 ression both at the mRNA level via viral RNA endonuclease PA-X and at the polypeptide level by induci
224 ll as PCNA-dependent activation of MutLalpha endonuclease, PCNA- and DNA-dependent activation of MutL
225 enzymatic activities to shut down the Cas12a endonuclease, providing a multi-turnover off-switch for
226 utation in retinoblastoma binding protein 8, endonuclease (Rbbp8, also known as CtIP), which regulate
227 ition, due to the fast kinetics of the RNase endonuclease reaction, the loaded H(1)/H(2) was quickly
228 by hybrid cleavage with specific restriction endonuclease (REase), and release of trigger oligonucleo
231 ctions of Integrator subunits beyond the RNA endonuclease remain poorly understood, but some can act
232 plications of CRISPR-Cas9, an RNA-guided DNA endonuclease, require precision control of Cas9 activity
233 A newly developed inhibitor of the viral endonuclease responsible for this cap-snatching shows th
234 n by covalent fixation, while the concurrent endonuclease restriction eliminates this bias, allowing
236 first clinical studies utilizing RNA-guided endonucleases (RGENs) to therapeutically edit RNA and DN
239 te the important role of the low-specificity endonuclease RNase E in shaping the transcriptome of a b
243 lates (2'-5'A) that interact with the latent endonuclease RNase L, causing it to dimerize and cleave
244 revealed that loss of the structure-specific endonuclease scaffold SLX4 reduced the proliferation of
245 taining three DNA repair structure-selective endonucleases: SLX1-SLX4, MUS81-EME1, and XPF-ERCC1.
248 onstrated with genomic maps of site-specific endonuclease strand-breaks in purified DNA from Escheric
251 Dual deficiency of MUS81 structure-specific endonuclease subunit (MUS81) and RECQ1 increased gemcita
253 ure termination requires RNA cleavage by the endonuclease subunit of Integrator, but the roles of oth
254 ifficult to achieve(3) because commonly used endonucleases, such as Streptococcus pyogenes Cas9 (SpCa
255 lication proteins (Rep) belonging to the HUH endonuclease superfamily, we show that the replication m
256 ases (Y-CHOPE), incorporating a programmable endonuclease that 'shreds' the Y chromosome, thereby con
259 ply that the mammalian MutLgamma is a unique endonuclease that can initiate triplet repeat DNA expans
261 myces griseus SgrAI is a type II restriction endonuclease that forms run-on oligomer filaments when a
263 ida MPE protein is a manganese-dependent DNA endonuclease that incises either linear single strands o
264 mong the 14 subunits of Integrator is an RNA endonuclease that is crucial for the biogenesis of small
265 in yeast, we identify Cue2 as the conserved endonuclease that is recruited to stalled ribosomes to p
267 i is a recently identified type V CRISPR-Cas endonuclease that predominantly cleaves the non-target s
269 n early steps of mismatch repair as a latent endonuclease that requires a mismatch, MutSalpha/beta, a
270 sequence mapping workflow combining multiple endonucleases that cleave mRNA at different frequencies.
272 a scaffold protein and coordinates multiple endonucleases that unhook ICLs, resolve homologous recom
273 translesion DNA synthesis and the action of endonucleases that would otherwise generate mutations an
274 tured the pre-mRNA in the active site of the endonuclease, the 73-kilodalton subunit of the cleavage
276 ntrast to the ORFs for PUA domain containing endonucleases, the ORFs for DUF3427 fusion proteins were
277 f the structural and functional diversity of endonucleases throughout the biosphere in DNA restrictio
278 tionality reliant on the ability of the Cas9 endonuclease to introduce site-specific breaks in double
279 ng (the CRISPR guide RNA) can guide the Cas9 endonuclease to specific locations in complex genomes to
280 ationally modeled the local accessibility to endonucleases, to predict the reactivity of twenty sites
281 t single-strand DNA breaks induced by the L1 endonuclease trigger the recruitment of poly(ADP-ribose)
283 operties of the well-studied, DNA-guided DNA endonuclease, TtAgo, an Argonaute protein from the Eubac
285 se challenges, we show that Escherichia coli Endonuclease V (eEndoV), an inosine-cleaving enzyme, can
288 his capability to demonstrate EndoVIPER-seq (Endonuclease V inosine precipitation enrichment sequenci
290 , ORFs for PUA-superfamily domain containing endonucleases were not close to DNA methyltransferase OR
291 lation of Sae2 activates resection via Mre11 endonuclease, whereas Sae2 phosphorylation by Mec1 and T
292 Streptococcus pyogenes is an RNA-guided DNA endonuclease, which has become the most popular genome e
293 lly toxic structures requires the MUS81-EME1 endonuclease, which is activated at prometaphase by form
294 PF heterodimer is a 5'-3' structure-specific endonuclease, which plays an essential role in several D
295 dent kinase (CDK1/Cdc28) activates the Mre11 endonuclease, while the physiological role of Sae2 phosp
297 se that MPE exemplifies a novel clade of DNA endonuclease within the binuclear metallophosphoesterase
300 osome deletion using Orthogonal Programmable Endonucleases (Y-CHOPE), incorporating a programmable en