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1 RF13_cpx, each of which contains a subtype A env gene.
2 probes complementary to the V1 region of the env gene.
3 s mediated by the gp120 coding region of the env gene.
4 ial sequence of the gp41 region of the HIV-1 env gene.
5 cine using a deduced ancestral state for the env gene.
6 mbination event may have occurred within the env gene.
7 tution (S84A) in the VRA region of the viral env gene.
8 cates that interferon resistance maps to the env gene.
9 des 752 to 2818 which encompasses the entire env gene.
10 es, and an internal promoter (IP) within the env gene.
11 murine B cells transfected with the HERV-K18 env gene.
12 of soluble trimers based on the clade B B41 env gene.
13 ines revealed second-site changes within the env gene.
14 HIV-gpt proviruses, which lack a functional env gene.
15 ion of the transmembrane (TM) protein of the env gene.
16 resence of unique sequences within the viral env gene.
17 utant containing a point mutation within the env gene.
18 ions and cells transfected with the complete env gene.
19 ent paradigm is based on the BG505 subtype A env gene.
20 ve-like SOSIP.664 trimers based on the BG505 env gene.
21 ions, and recombination events involving the env gene.
22 d polymerase chain reaction specific for the env gene.
23 mutation or recombination of the subgroup A env gene.
24 emerged by mutation or recombination of the env gene.
25 less stringent negative selection within the env gene.
26 SIV(mac251) (ALVAC-SIV/CD40L) gag, pol, and env genes.
27 transmembrane domain, similar to retroviral env genes.
28 d PI and TCLA viruses and molecularly cloned env genes.
29 make recombinant trimers from many different env genes.
30 ed by DNA sequence analysis of pol, gag, and env genes.
31 al fluid (CSF)-derived, R5 macrophage-tropic env genes.
32 t-generation sequencing of the viral gag and env genes.
33 most of them directed against the envelope (env) gene.
34 pression of an interfering MCF MLV envelope (Env) gene.
36 e sheep retrovirus (JSRV) encodes within the env gene a trans-acting factor (Rej) necessary for the s
37 gammaretroviruses with concentration in the env gene across the GALV strains that were particularly
39 icate that a vaccine expressing a mismatched Env gene alone can prevent SIV infection in NHPs and ide
40 encoding a murine leukemia virus amphotropic env gene and a green fluorescent protein (GFP) reporter
41 d a large pool of insertion mutations in the env gene and analyzed the fitness of each mutant in comp
42 and tissue tropisms controlled by the HIV-1 env gene and for the analysis of mechanisms of viral imm
43 dependent on sequences at the 3' end of the env gene and not on the polytropic regions or on the 585
44 e evolution of the C2-V5 region of the HIV-1 env gene and of T-cell subsets in nine men with a modera
45 ctivation element [CTE]) located between the env gene and the 3' long terminal repeat of simian retro
46 ptible, full-length, biologically functional env genes and characterized viruses pseudotyped with the
48 We transfected various combinations of these Env genes and investigated Env-mediated cell fusion and
49 eficiency virus type 1 (HIV-1) pol, vif, and env genes and the 3' long terminal repeat (LTR) sequence
50 a sequence was also found in analysis of the env gene, and linkage by long-distance reverse transcrip
51 minor HIV-1 variants in the V3 region of the env gene, and to identify minor drug-resistant variants
52 ced by a ribozyme directed against the HIV-1 env gene, and whether the antiviral activity was affecte
53 inant multimeric proteins based on the HIV-1 env gene are current candidate immunogens for vaccine tr
54 Recombinant trimeric proteins based on HIV-1 env genes are being developed for future vaccine trials
55 Recombinant trimeric proteins based on HIV-1 env genes are being developed for vaccine trials in huma
56 Thus, the computer-generated "consensus" env genes are capable of expressing envelope glycoprotei
57 be an experimental approach to analyze HIV-1 env genes as intact genetic units amplified from plasma
58 ct open reading frames for the gag, pol, and env genes, as well as nearly identical flanking long ter
59 ew SOSIP.664 trimer derived from a subtype B env gene, B41, including how to make this protein in low
60 mpared the pattern of evolution of the HIV-1 env gene between individuals with recent HIV infection w
61 V-A, PERV-B, and PERV-C) which have distinct env genes but have highly homologous sequences in the re
62 on values were similar for the gag, pol, and env genes but these genes differed significantly from th
63 mapped to specific regions in the envelope (env) gene by using a cloning-hybridization technique and
64 one, HIV-Du151.2env-NLuc, which expresses an env gene (C.Du151.2) cloned from an acute heterosexually
66 ess of the primary B5 HIV-1 isolates and its env gene cloned into the NL4-3 laboratory strain had sim
67 able to that seen with several primary HIV-1 env genes cloned from individuals with disease progressi
69 ested and was exclusively R5 tropic, and its env gene clustered with HIV-C by phylogenetic analysis;
70 synthesized an artificial group M consensus env gene (CON6 gene) to be equidistant from contemporary
71 have generated a synthetic group M consensus env gene (CON6) for induction of cross-subtype immune re
72 the numerous copies of endogenous retroviral env genes conserved within mammalian genomes act as rest
73 and gp41 was demonstrated in that a chimeric env gene consisting of a gp120 coding sequence from an N
75 n resulting in acquisition of a heterologous env gene could in theory facilitate cross-species transm
76 ent study, we investigated whether envelope (env) genes could be amplified from proviral DNA or RNA d
79 he HERV-W env gene represents the first HERV env gene demonstrated to encode the functional propertie
80 enesis of multiple primary and prototypic R5 env genes demonstrated that the GPG motif was necessary
81 vaccination with a mismatched SIV envelope (Env) gene, derived from simian immunodeficiency virus SI
82 antiretroviral env, we argue that many more env gene-derived restriction factors await discovery in
83 leukosis virus (ALV) that includes a unique env gene, designated J, was identified recently in Engla
86 sign is designated SOSIP.664, but many HIV-1 env genes do not yield fully native-like trimers efficie
88 The Friend spleen focus-forming virus (SFFV) env gene encodes a 409-amino-acid glycoprotein with an a
89 The Friend spleen focus-forming virus (SFFV) env gene encodes a glycoprotein with apparent Mr of 55,0
91 al might be an artifact of the region of the env gene evaluated and that regions other than V3 might
93 unodeficiency virus type 1 (HIV-1) envelope (env) gene exhibits a high level of genetic heterogeneity
96 erythropoietin receptor (EpoR) by the virus env gene (F-gp55), aberrant over-expression of the trans
97 ino acids of the N-terminal mature SU of FRA env gene, followed by eight amino acids from the framesh
99 ve paired blood-derived, T cell-tropic HIV-1 env genes, four of which are CCR5-using (R5) and one of
100 -R) activation, such as interaction with the env gene Friend virus envelope glycoprotein (F-gp55) of
101 ction with a eukaryotic vector expressing an env gene from a cell culture-adapted strain of virus cor
102 n with HIV-1 env DNA plus HIV-1 Env protein (env gene from HXBc2 clone of HIV IIIB; Env protein from
105 inant vaccinia vectors (vv) expressing HIV-1 env genes from early isolates of four vertically infecte
106 gh frequency of G-to-A hypermutations in the env genes from HIV-1BaL-infected MDDCs treated with low
109 ed phenotypic and genetic variation in HIV-1 env genes from subjects in acute/early infection and sub
113 In this study, we analyzed 37 full-length env genes from uncultured brain biopsy and blood samples
115 ency virus type 1 (HIV-1) tat, rev, vpu, and env genes generated pathogenic viruses (SHIV-89.6P) indu
117 was shown that almost the entire retroviral env gene had been replaced by a sequence of cellular ori
118 Notably, proteins produced from envelope (env) genes have been shown to act as restriction factors
120 s responsible have been mapped to within the env gene; however, it has remained unclear how env media
121 RV-T provirus in hominid genomes includes an env gene (hsaHTenv) that has been uniquely preserved.
122 t range, and sequence analysis of the CasE#1 env gene identifies segments related to PMVs and XMVs.
123 of the viruses, including the Vif, OrfA, and Env genes; (ii) the 5' end extending from the 5' long te
124 in the V1/V2 and C2/V3 regions of the HIV-1 env gene in 30 late-stage and 6 early-stage subjects.
125 evolution in the C2V3C3 region of the viral env gene in 8 HIV-2-infected individuals from Dakar, Sen
126 cation-competent MLV by replacing the native env gene in a full-length viral genome with that of anot
127 ly variable V3 or V4-V5 regions of the HIV-1 env gene in eight subjects, we found that all detectable
130 as inserted after the last nucleotide of the env gene in the ecotropic FeLV-A Rickard (FRA) provirus.
134 phenotype was transferable by expressing the env genes in an isogenic proviral DNA backbone, indicati
137 del for analyzing the functions of subtype-E env genes in viral transmission and pathogenesis and for
138 id resistance gene gpt in place of the viral env gene) in permissive cells, and we used them to gener
139 man cells in SCID-hu mice to a region of the env gene including the three most amino-terminal variabl
140 on of rev) open reading frames, the complete env gene (including the first exon of rev), and the 3' l
141 us vectors (Ad5 or Ad35) and HIV-1 envelope (Env) gene inserts (clade A or B) in a prime-boost regime
142 Transfer of the entire SHIV(DH12R-CL-7) env gene into the genetic background of nonpathogenic SH
144 ous studies of men have shown that the HIV-1 env gene is homogeneous early in infection, leading to t
146 opic SHIV carrying a primary pediatric HIV-C env gene isolated from a 2-month-old Zambian infant, who
147 se data led to the suggestion that the ALV-J env gene might have arisen by multiple recombination eve
150 ts expressing molecularly cloned full-length env genes obtained from patient-derived HIV-1 isolates b
152 genetic events that led to truncation in the env gene occurred de novo in FeLV lymphomagenesis and th
153 These represent the only cases in which the env gene of a retrovirus has been traced back to its ori
156 virus (EBV) transcriptionally activates the env gene of an endogenous retrovirus, HERV-K18, that pos
161 A naturally arising point mutation in the env gene of HIV-1 activates the aberrant inclusion of th
162 s begun with a chimeric virus containing the env gene of HIV-1 HXBc2 and the gag and pol genes of sim
163 n vitro or in vivo, were introduced into the env gene of HIV-1(NL4-3) by site-directed mutagenesis an
164 d the complete variable region 3 (V3) of the env gene of HIV-1(YU2) or HIV-1(Ccon) to yield the chime
168 cted by PCR a 660-bp sequence similar to the env gene of MMTV but not to the known endogenous viruses
170 tutions accumulated over time throughout the env gene of SHIVSF33A; some of them coincided with the a
171 the Rev responsive element (RRE) within the env gene of the HIV-1 RNA genome and is involved in tran
172 the Rev responsive element (RRE) within the env gene of the HIV-1 RNA genome, activating the switch
174 n expression levels of plasmid clones of the env gene of the MCF13 and noncytopathic NZB-9 MLV strain
175 gle transmembrane helix that is coded by the env gene of the polycythemic strain of the spleen focus
176 ied and sequenced the full-length RNA of the env gene of the type 1 and 2 HERV-K (HML-2) viruses coll
179 ted by recombination of ecotropic MuLVs with env genes of a family of endogenous proviruses in mice,
180 presence of the same lethal mutation in the env genes of both FeLV and murine ERV provides a common
181 When the recombinant trimers based on the env genes of isolates 92UG037.8 and CZA97.012 were made
185 In the present study, the gag, pol, and env genes of SIV(K6W) were expressed in the NYVAC vector
188 e regions that are related to those found in env genes of the A to E subgroups, the majority of the s
190 (SHIV) that contained the tat, rev, vpu, and env genes of the HXBc2 strain of HIV-1 in a genetic back
191 e common laboratory strains contain proviral env genes of the xenotropic/polytropic subgroup of mouse
192 ke soluble, recombinant trimers based on the env genes of two isolates of human immunodeficiency viru
195 mbinant FeLVs in which the LTR and envelope (env) gene of FeLV-945, or the LTR only, was substituted
197 ncytin genes are fusogenic envelope protein (env) genes of retroviral origin that have been captured
199 ults suggest that the alteration maps in the env gene or in a gene whose product affects the maturati
201 unodeficiency virus genome where the rev and env genes overlap, resulting in changes in the predicted
203 ic MuLV with two distinct sets of polytropic env genes present in the genomes of inbred mouse strains
204 ) in addition to the canonical gag, pol, and env genes, presumably reflecting its limited tropism to
205 sition 427 in the C4 region of the HIV-2/vcp env gene product (VCP) gp120 as a key determinant for th
208 ing target cells infected with vv-expressing env gene products from early isolates and HIV-1 IIIB wer
209 of target cells expressing laboratory strain env gene products might limit the detection of HIV-1 env
213 late, higher fitness mapped to the subtype B env gene rather than the subtype C gag and pol genes.
214 leukemogenesis in mice is the appearance of env gene recombinants known as mink cell focus-inducing
215 itional 31 sexually transmitted Kenyan HIV-1 env genes, representing several recent infections with s
217 ypical retroviruses, whereas others lack the env gene required for virions to enter cells and thus be
219 e subunit (TM) of the envelope glycoprotein (env) gene result in a different topology for some retrov
221 CR analyses of plasma viral RNA indicated an env gene segment containing the V3 region from the inocu
223 660-bp mouse mammary tumor virus (MMTV)-like env gene sequence in approximately 38% of human breast c
228 exogenous ecotropic MuLVs are replaced with env gene sequences from an endogenous polytropic retrovi
230 cular, is limited since only about 400 bp of env gene sequences have been determined for just two epi
232 proviruses that are potential donors of the env gene sequences of polytropic MuLVs; however, the pre
233 gical studies, the HIV-1 tat and part of the env gene sequences of the longitudinal isolates at four
235 vestigate their validity for HIV, samples of env gene sequences were tested for departure from neutra
238 sociated with the central region of the Fr98 env gene showed no upregulation of cytokines or chemokin
239 thern China, where partial sequencing of the env gene showed subtype C and circulating recombinant fo
240 affinity for IgG1b12, and sequencing of its env gene showed that amino acid substitutions had occurr
241 iruses and their acquisition of an envelope (env) gene, similar independent events may have occurred
242 ogenous feline leukemia virus (FeLV)-related env gene species from lymphosarcomas induced by intrader
245 rmined for the gag and pol genes but not the env gene, suggesting that a recombination event may have
248 nt, SIV/17E-Cl, contained the portion of the env gene that encodes the surface glycoprotein and a sho
249 ha secretion mapped to a region of the HIV-1 env gene that includes the third hypervariable domain.
250 enotypic and phenotypic changes in the viral env gene that occur in the viral populations of DKO-hu-H
251 Escape virus contained mutations in the env gene that were unexpectedly sparse, did not map gene
252 tribution of V3 sequence variation, chimeric Env genes that contained consensus V3 sequences from sev
253 promoter, located towards the 3' end of the env gene, that directs expression of the viral auxiliary
254 e virulence of these viruses maps within the env gene, the mechanism of fusion enhancement is not ful
255 RV lineages, we show that when ERVs lose the env gene their proliferation within that genome is boost
256 the methods may have wider utility for other env genes, thereby further guiding immunogen design.
257 /V2) and variable region 3 (V3) of the HIV-1 env gene to analyze the effect of a genetic bottleneck c
259 ion and sequence analysis of the full-length env gene to identify CSF-compartmentalized variants and
260 ate the evolutionary potential of retroviral env genes to alter receptor usage in response to appropr
261 Here, we used the CZA97.012 and 92UG037.8 env genes to compare some of these designs and determine
262 endpoint dilution PCR followed by cloning of env genes to create pseudotyped virus to explore the lin
263 region of the surface envelope glycoprotein (env) gene to investigate the replication and cellular tr
264 cine candidate vector expressing HIV gag and env genes, vCP205, was modified by the introduction of a
265 roteins (gp140UNC-Fd-His), based on the same env genes, very rarely form native-like trimers, a findi
266 A full-length ancestral subtype B HIV-1 env gene was constructed and shown to produce a glycopro
267 sequencing of the V1/V3 region of the HIV-1 env gene was done for paired blood and semen samples fro
269 Single genome amplification for the HIV env gene was performed on genomic DNA extracts from diff
271 ated with the N-terminal portion of the Fr98 env gene was preceded by upregulation of cytokines and c
274 immunodeficiency virus sm (SIVsm) envelope (env) gene was analyzed in relation to route of virus cha
276 e phosphoribosyl transferase in place of the env gene, we generated cell lines resistant to mycopheno
277 contains multiple copies of xenotropic MuLV env genes, we suggest that these resistance genes contro
278 eterogeneity in protection, fragments of the env gene were amplified from peripheral blood mononuclea
279 on, the V1/V2 and V3 variable regions of the env gene were examined by using a heteroduplex tracking
280 and secondary protease cleavage sites of the env gene were identified that resulted in the stable sec
281 fact that the endogenous subgroup J-related env genes were associated with long terminal repeats (LT
282 kine receptor utilization, full-length HIV-1 env genes were cloned from latently infected cells and a
284 env genes, expression plasmids for the three env genes were constructed and used to generate retrovir
285 hritis; for a subset of samples, full-length env genes were generated for sequence analysis and to te
291 me indicates that neurovirulence maps to the env gene, which encodes the surface glycoprotein respons
294 ngle nucleotide polymorphism in the ERV-DC14 env gene, which results in a replication-defective produ
299 rent factor-independent cell clones revealed env genes with open reading frames encoding 644, 449, an
300 can be recovered in vivo by mutations in the env gene, without an associated pathogenic phenotype, an