コーパス検索結果 (1語後でソート)
通し番号をクリックするとPubMedの該当ページを表示します
1 four amino acids preceding the lysines, or a frameshift.
2 ubset (~8%) of the translating pool robustly frameshift.
3 bit significant robustness against +1 and -1 frameshifts.
4 tion of an abasic site resulted in mainly -1 frameshifts.
5 rate RNA gaps, thereby causing translational frameshifts.
6 e how the m(1)G37 modification prevents mRNA frameshifting.
7 otifs significantly influences the levels of frameshifting.
8 egisters reminiscent of programmed ribosomal frameshifting.
9 tein sequences remain largely invariant upon frameshifting.
10 polypeptide chain that scales with observed frameshifting.
11 low down mRNA translocation and promote mRNA frameshifting.
12 sing programmed ribosome pausing or inducing frameshifting.
13 that RNA decay mechanisms involving upstream frameshift 1 (UPF1), including nonsense-mediated decay (
14 lar mechanism called programmed -1 ribosomal frameshift (-1 PRF) to control the relative expression o
15 Many viruses utilize programmed -1 ribosomal frameshifting (-1 PRF) to express additional proteins or
16 alphaviruses utilize programmed -1 ribosomal frameshifting (-1 PRF) to synthesize the viral trans-fra
17 her consideration, including 21 nonsense, 28 frameshift, 13 splice-region, and 225 missense variants.
19 we identified novel protein-coding UPF2 (UP-Frameshift 2) variants in humans with NDD, including spe
21 the genome and analyze the in-frame (3n) and frameshift (3n + 1 and 3n + 2) mutations in the targeted
22 essential, and this selective elimination of frameshift (3n + 1 and 3n + 2) mutations of the gene ind
26 d larval lethality, while heterozygotes with frameshift alleles survived to adulthood, suggesting a p
27 ed zebrafish mutants with novel missense and frameshift alleles: p.Ser129Phe, p.Ser129Cys (which repl
28 4 different novel variants (2 splice site, 2 frameshift and 10 missense changes) in GNB1 in 16 pediat
30 ation within the hmgA gene that results in a frameshift and early termination of translation of the h
31 d by exome or genome sequencing to carry one frameshift and four different homozygous non-synonymous
32 to express additional proteins or to produce frameshift and non-frameshift protein products at a fixe
35 all nine YAP1 spliceforms, and results in a frameshift and subsequent premature termination codon in
37 cases (18 missense, one splice acceptor, one frameshift and two near splice regions) and five in cont
38 These data provide insight into retroviral frameshifting and could lead to alternative strategies t
39 ragenic SD-like sequences stimulate ribosome frameshifting and may also slow down ribosome movement a
40 ormational heterogeneity plays a key role in frameshifting and suggest that transitions between diffe
43 had a deletion or duplication resulting in a frameshift, and one had a canonical splice acceptor site
45 yses demonstrated the induction of ribosomal frameshifting, and the generation and presentation of ab
46 letions, balanced structural rearrangements, frameshifts, and nonsense variants are predicted to inac
49 nockout methods in cell lines have relied on frameshifts caused by stochastic insertion/deletion in a
50 e exome sequencing, we identified homozygous frameshift CCDC32 variants in three affected individuals
51 is in the first family detected a homozygous frameshift change [c.606delinsTA; p.(Lys202Asnfs*?)].
52 examined the impact of germline heterozygous frameshift Chd8 mutation on neurodevelopment in mice.
55 that genetic elements supporting productive frameshifting could rapidly evolve de novo, even in esse
56 sy and Williams-Beuren syndrome identified a frameshifting de novo variant in a major GABA(A)R gene,
57 engineered into 1 allele and a 16 base pair frameshift deletion engineered into the second allele.
59 me sequencing, we identified a de novo KCNN2 frameshift deletion in a patient with learning disabilit
61 One patient's resistant tumor demonstrated a frameshift deletion in interferon gamma receptor 1, whic
62 thogenic variants included missense changes, frameshift deletions and insertions in WFS1 and an exoni
63 Synthesis of a proportion of non-ribosomal frameshift derived GagPol would be relevant in efforts t
64 Patient iPSC-derived neurons with a rare frameshift DISC1 (Disrupted-in-schizophrenia 1) mutation
65 ormational plasticity of the high-efficiency frameshifting double mutant of the 26 nt potato leaf rol
68 ism to influence the efficiency of ribosomal frameshifting during translation of viral RNA, indicatin
69 that 1,N (6)-erA in DNA generates extensive frameshifts during TLS, which can lead to genomic instab
72 translation and suggest naturally occurring frameshift elements may be regulated by the abundance of
78 eshifting RNA (~3 aa/s) and can continuously frameshift for more than four rounds of translation.
79 nherited misfolded secretory protein, mucin1-frameshifted, from an intracellular location in immortal
81 utophagy, which is truncated in cancers by a frameshift (FS) mutation and expressed as a shortened UV
83 s with the most recurrent mutation being the frameshift G659Vfs*41 with frequencies of ~5-8% in colon
88 ntified an inherited 2 bp deletion causing a frameshift in BRPF1 (c.1052_1053del) in five affected fa
90 ring translational stalling, which can alter frameshifting in both the stalled and trailing ribosomes
92 to polyploidy or gene amplification because frameshifts in all alleles can be difficult to generate
93 s accounted for two low-frequency mutations, frameshifts in genes encoding protein components of the
97 unction, predicted deleterious missense, and frameshift) in all three subcategories were significantl
98 ous pathogenic variants (seven missense, two frameshift) in CDH2 in nine individuals with a syndromic
99 checkpoint inhibitor response data revealed frameshift indel count to be significantly associated wi
101 , and rs72821893 in KRT25 (c.800G>A) and the frameshift indels rs37146475 in GPRC6A (c.2323-2324insT)
103 f a premature termination codon (PTC) from a frameshift-inducing INDEL that elicits nonsense-mediated
104 l RNA panhandle duplex and HIV-1-1 ribosomal frameshift-inducing RNA hairpin, but not ssRNAs or DNAs,
105 ransfer (smFRET) experiments, we studied how frameshift-inducing stem-loops from E. coli dnaX mRNA an
106 t -1 PRF in SARS-CoV-2, suggesting that such frameshift inhibitors may be promising lead compounds to
107 comitant splicing mutation (c.70-1G>A) and a frameshift insertion (c.73_74insG, p.Ala25Glyfs*27).
112 ince it is an essential driver gene and 4 bp frameshift insertions occur in the same hotspot in 30%-3
113 Among different types of variation, non-frameshifting insertions and deletions (indels) represen
114 ost common strategy is the introduction of a frameshift into the open reading frame (ORF) of the targ
116 elTAAG (p.Val296Glyfs(*)13), in exon 5; this frameshift introduces a stop codon in amino acid 308 of
121 ppage site, which is important for ribosomal frameshifting, is shown here to limit reverse transcript
122 to a bursty model of frameshifting constrain frameshifting kinetic rates and demonstrate how ribosoma
123 has uncovered many details about single RNA frameshifting kinetics in vitro, little is known about h
125 ve mutations mediated by a gene-inactivating frameshift mechanism during passage of an attenuated VAC
126 d that an evolutionarily conserved ribosomal frameshifting mechanism is used by simarteriviruses and
127 cell labeling based on mononucleotide repeat frameshift (MORF) as a stochastic translational switch.
128 messages containing the IS3, dnaX, and prfB frameshift motifs significantly influences the levels of
129 erentially expressed genes (DEGs) in the two frameshift mutant lines and found many down-regulated DE
131 mutant with a single-codon deletion and two frameshift mutants of the ANT1 ortholog in the C4 millet
132 re, we observed that a known illness-related frameshift mutation after amino acid 807 causes the C re
133 h genetically undefined CSA and identified a frameshift mutation and a rare promoter variant in HSCB
134 nalysis indicates a preexisting heterozygous frameshift mutation at codon 616 (N616fs*) in one of the
136 he consequences of a familial PAH-associated frameshift mutation in CAV1, P158PfsX22, on caveolae ass
137 ts ascertained are siblings who had an early frameshift mutation in EXOSC5 and the p.Thr114Ile missen
138 ractivity, and ataxia, who carries a de novo frameshift mutation in KCNQ3 (KCNQ3-FS534), leading to t
139 bouriffe (ebo/ebo) harbors a homozygous 2-bp frameshift mutation in Lrrc8a that truncates the 15 term
143 characterized a mouse model knocked-in for a frameshift mutation in RYR1 exon 36 (p.Gln1970fsX16) tha
145 er disrupted the start codon or introduced a frameshift mutation in the early coding region, ensuring
147 the two repressors, or to the selection of a frameshift mutation in the gene encoding the repressors
149 ed with whole exome sequencing (WES) a novel frameshift mutation in the SPART gene in 2 brothers pres
150 ats-associated protein 9 to introduce a Bcor frameshift mutation into NP23 hematopoietic stem and pro
151 SK current; thereby confirming that only the frameshift mutation is associated with loss of function
153 premature stop codon introduced by the CHADL frameshift mutation results in nonsense-mediated decay o
154 t formally assess the association of the CR1 frameshift mutation with Alzheimer's disease due to insu
156 Here we report and characterize a +1-nt frameshift mutation, centrally located in rpoB, an essen
157 amming, we used CRISPR-Cas9 to produce a new frameshift mutation, GR(369-), which eliminates all pote
158 4.0 x 10(-12), odds ratio (OR) = 16.7) and a frameshift mutation, rs532464664 (p.Val330Glyfs*106), in
160 es); two siblings shared the same homozygous frameshift mutation, whereas one individual with sporadi
161 Here, we identify a new mechanism, termed frameshift mutation-induced alternative translation init
165 ith neurodegenerative disease and homozygous frameshift mutations (Asp517Metfs*19, Ser126Metfs*8, and
167 treatment and prevention of tumors harboring frameshift mutations and neoantigenic peptides as a resu
170 e with pleiotropic effects in human, in that frameshift mutations cause a severe multi-system disorde
171 from single amino acid (aa) substitutions to frameshift mutations causing premature stop codons, and
172 revealed that 2347 nonsynonymous SNPs and 51 frameshift mutations could differentiate the salt tolera
174 ense mutations can drive tumor immunity, but frameshift mutations have the potential to create far gr
175 rance in M. tuberculosis caused by transient frameshift mutations in a homopolymeric tract (HT) of 7
180 tumor-specific antigens derived from shared frameshift mutations in MSI-H cancer and Lynch syndrome
181 Here, we identify biallelic missense and frameshift mutations in NARS1 in seven patients from thr
182 enotype resulted from nonsense, missense, or frameshift mutations in prfA Five strains carried hly mu
190 er tumors characterized by PIK3CA C-terminal frameshift mutations may derive benefit from p110alpha-s
192 origin (pro-B1 ALL), accompanied by somatic frameshift mutations of the BCL6 interacting corepressor
193 The capacity to make precisely directed frameshift mutations should greatly accelerate the molec
196 d repair outcome signatures enriched towards frameshift mutations, allowing maximization of CRISPR/Ca
197 defects caused by APOBEC-mediated mutations, frameshift mutations, and inactivating point mutations.
199 ignment, as virtually all RNF43 nonsense and frameshift mutations, including those in the C-terminal
200 ne repair, leading to substitution and short frameshift mutations, they are both a source of genome d
203 ndary somatic loss-of-function (nonsense and frameshift) mutations in SAMD9 rescued the growth-restri
205 hed in olfactory receptor activity while non-frameshift (NFS) indels are enriched in transcription-re
207 suggest this may parallel the role of CREBBP frameshift/nonsense mutations in DLBCL that result in lo
210 ddition, we determined that bL9 can suppress frameshifting of its host ribosome, likely by regulating
213 is a fusion protein encoded in part by a +1 frameshifted open reading frame (X-ORF) in segment 3.
215 astating for the encoded protein, inducing a frameshift or in-frame deletion/insertion of multiple re
220 t protein with altered activity or introduce frameshifts or stop codons or disrupt regulatory element
221 h a bioinformatic pipeline to detect indels, frameshifts, or hypermutations that would render them de
224 nerated a novel antibody to the unique human frameshift peptide epitope, allowing specific identifica
226 We further confirmed the immunogenicity of frameshift peptides in T cell stimulation experiments us
227 d with rhodopsin biosynthesis defects, while frameshift phenotypes were consistent with knockout.
230 n of reads flanking the programmed ribosomal frameshifting (PRF) signal at the genomic RNA ORF1a/ORF1
231 l mechanisms, including programmed ribosomal frameshifting (PRF), which facilitates the production of
234 hereby enabling the ribosome to generate two frameshift products that are implicated in viral immune
236 al proteins or to produce frameshift and non-frameshift protein products at a fixed stoichiometric ra
238 dinucleotide usage, RNA structure around the frameshift region) in comparison with other members of t
239 bined with RNA-binding assays and cell-based frameshifting reporter assays reveal a number of key res
240 tide in its anticodon loop that undergoes +1 frameshifting, reveal that m(1)G37 destabilizes interact
242 g RNA are translated at similar rates as non-frameshifting RNA (~3 aa/s) and can continuously framesh
244 lements located at the 5' end, the ribosomal frameshift segment and the 3'-untranslated region (3'-UT
245 ng this technology to RNA encoding the HIV-1 frameshift sequence reveals a small subset (~8%) of the
246 e ribosome during PRF, we found that the WNV frameshift signal formed an unusually large number of di
247 n, we studied the structural dynamics of the frameshift signal from West Nile virus (WNV), which stim
248 between the different conformers of the WNV frameshift signal was maximal in the range of forces app
250 erichia coli dnaX gene, which contains three frameshifting signals: a slippery sequence (A AAA AAG),
251 tein in vitro, it could not be overridden by frameshift site mutations that block PA-X expression and
252 l PA-X expression, either by mutation of the frameshift site or by truncating the X open reading fram
254 ve TSAs are antigens derived from mutational frameshifts, splice variants, gene fusions, endogenous r
255 ignificance and optimality demonstrates that frameshift stability is embedded in the structure of the
257 sent an extensive mutational analysis of the frameshift stimulators (mRNA signals and 2A protein) ana
258 reveal a very high rate (5%) of spontaneous frameshift suppression occurring on a heptanucleotide se
261 ibosomes translating copA undergo programmed frameshifting, terminate translation in the -1 frame, an
265 utations included a partial gene deletion, a frameshift, three nonsense mutations, a single amino aci
266 RNAs) contain motifs that promote deliberate frameshifting to regulate production of the encoded prot
267 tes skipping of CD58 exon 3 and results in a frameshifted transcript, indicating that the Alu may be
268 icate polyA runs cause ribosome stalling and frameshifting, triggering mRNA surveillance pathways and
270 The second patient was homozygous for a frameshift variant (NM_001348097.1:c.1294delA, p.[Thr432
271 ome sequencing, we identified a heterozygous frameshift variant (p.Ser117HisfsTer10) in F3, the gene
272 heterozygous variant carrying the identical frameshift variant and a large deletion (c.867_(*)343+12
273 the Nfasc155 isoform as a consequence of the frameshift variant and a significant reduction of expres
274 ic arrest and identified the same homozygous frameshift variant c.676dup (p.Trp226LeufsTer4) in M1AP,
276 the individuals is an 11-year-old boy with a frameshift variant in exon 7 of NAA10, who presents most
278 hole-exome sequencing, we identified a novel frameshift variant in the ubiquitously expressed transcr
279 exome sequencing revealed a novel homozygous frameshift variant p.Val242GlufsTer52 in the TSPY-like 1
280 t disease mechanism, and report a novel uORF frameshift variant upstream of NF2 in neurofibromatosis.
283 CD subject identified an apparent homozygous frameshift variant, c.887_890delTAAG (p.Val296Glyfs(*)13
284 novel amyloidogenic fibrinogen Aalpha-chain frameshift variant, Phe521Leufs, causing a severe famili
286 function CASR variants (6 different nonsense/frameshift variants and 12 different missense variants)
287 3, underlines the clustering of nonsense and frameshift variants causing AI in the absence of junctio
288 tile males revealed three heterozygous SYCP2 frameshift variants in additional subjects with cryptozo
289 iduals with ID, we identified two bi-allelic frameshift variants in METTL5, c.344_345delGA (p.Arg115A
291 We report here six individuals with de novo frameshift variants in NOVA2 affected with a severe neur
292 n and established that germline nonsense and frameshift variants in PALB2, but not in ATM or CHEK2, c
293 We observed notable diversity, including frameshift variants, in aniA and fHbp and the presence o
294 ers amyloidogenic properties to Aalpha-chain frameshift variants, yielding a previously unknown molec
295 hobicity profiles of the original and the +1-frameshifted variants greater than 0.7, despite an avera
296 In addition to confirming that clustered -1 frameshifting variants in DVL1 and DVL3 are the main con
299 along mRNA and stimulate programmed ribosome frameshifting via mechanisms that are not well understoo