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1 ve oncogenes or fragile sites ("unexplained" homozygous deletions).
2 mic alterations including amplifications and homozygous deletions.
3 table transgenic lines and mutant lines with homozygous deletions.
4 lines are superior for the identification of homozygous deletions.
5 n a specific area of common heterozygous and homozygous deletions.
6 occurrence of cancer gene amplifications and homozygous deletions.
7 al events, including 24 amplifications and 7 homozygous deletions.
8 s 96 genomic regions recurrently targeted by homozygous deletions.
9 nd include high-amplitude amplifications and homozygous deletions.
10 ated the genome landscape within unexplained homozygous deletions.
11 not translated, 4 were intronic, and 2 were homozygous deletions.
12 ions, some with high-level amplifications or homozygous deletions.
13 elocytic leukemia zinc finger (PLZF) protein homozygous deletions.
14 as project, 93 (21%) have KLLN hemizygous or homozygous deletions.
18 n cancer types and systematically screen for homozygous deletions, aiming to identify rare tumour sup
21 ted over 50 sites (amplifications, potential homozygous deletion and gains or losses which extended o
22 ozygosity and copy number changes, including homozygous deletion and gene amplification, were similar
28 showing signatures of positive selection for homozygous deletions and identify candidate tumour suppr
32 polymorphisms in NQO1 (Pro187Ser) and GSTM1 (homozygous deletion) and asthma risk in children with hi
33 reduced in LKB1-null cell lines (mutation or homozygous deletion) and this partial degradation occurs
34 dies have shown that loss of heterozygosity, homozygous deletions, and abnormal expression of the FHI
35 ed and mapped regions of single-copy losses, homozygous deletions, and amplicons of various sizes in
37 ncers, including 8.1% heterozygous and 12.1% homozygous deletions, and were linked to advanced tumor
38 hat the genomic positions of the unexplained homozygous deletions are not randomly determined (P < 0.
40 , supports the hypothesis that hemizygous or homozygous deletions are responsible for the abnormal ex
41 DEAR1 undergoes loss-of-function mutations, homozygous deletion, as well as copy-number losses in mu
48 ood by TaqMan and BioTrove assays identified homozygous deletions at the M1 and T1 loci of GST (GSTM1
49 a tendency to reduce the adverse effects of homozygous deletions by minimizing the number of genes r
53 s on the yeast whole-genome heterozygous and homozygous deletion collections and quantified the growt
54 ll prostate epithelium is inhibited by Grp78 homozygous deletion, corresponding with suppression of A
57 ygous deletion or through adipocyte-targeted homozygous deletion, exhibited increased O-GlcNAc levels
59 eam reporter gene expression in strains with homozygous deletions for either gene, showing that each
65 ic deletions in the tumor genome, especially homozygous deletions (HODs), have provided important pos
67 e recurrent region of loss contained a focal homozygous deletion in 11q24.2-q24.3 including the ETS1
68 defect led to the identification of a large homozygous deletion in FANCC, the first cancer cell line
72 s/ins)) as the primary disease locus while a homozygous deletion in MAP9 (MAP9 (del/del)) was later i
75 ous studies have determined that mice with a homozygous deletion in the adapter protein p66(shc) have
77 ne that may cause GPR56 dysfunction, a 15-bp homozygous deletion in the cis-regulatory element upstre
78 ts do not exhibit any phenotype, whereas the homozygous deletion in the entire epiblast leads to panc
79 ith KS and their sister with nIHH harbored a homozygous deletion in the PROK2 gene (p.[I55fsX1]+[I55f
80 ng the c-myc and c-erbB-2 genes and apparent homozygous deletions in 3p21, 5q33, 8p23, 8p21, 9q34, 16
83 4*1B and CYP3A5*3 variants and did not carry homozygous deletions in both GSTM1 and GSTT1 (denoted lo
86 re, to elucidate further the pathogenesis of homozygous deletions in cancer, we investigated the geno
89 d adr-2, and characterize strains containing homozygous deletions in each, or both, of these genes.
90 Luca) region has been defined by overlapping homozygous deletions in lung and breast cancer cell line
91 elic losses and the discovery of overlapping homozygous deletions in lung and breast tumour-cell line
93 gene, is a site of frequent heterozygous and homozygous deletions in many cancer cells and precancero
94 nto 131 genomic regions, 27 of which exhibit homozygous deletions in more than one cancer cell line.
99 competitive repopulation advantage, whereas homozygous deletion induces hematopoietic stem cell fail
100 es were analyzed for loss of heterozygosity, homozygous deletion, intragenic mutations, and promoter
102 Inactivation of tumour-suppressor genes by homozygous deletion is a prototypic event in the cancer
107 al response of both the reference strain and homozygous deletion mutant strain of CCC2, which encodes
114 ed a pool of 4,627 diploid strains each with homozygous deletion of a nonessential gene to identify t
115 owth factor (VEGF) stimulation with regional homozygous deletion of Alk1 induces severe dysplasia in
120 ssociated with pancreatic agenesis; however, homozygous deletion of both Gata4 and Gata6 is necessary
122 Delta11/Delta11)p53(+/-) mice that carried a homozygous deletion of Brca1 exon 11 and a p53 heterozyg
123 KRAS (73%), amplification of MYC (47%), and homozygous deletion of CDKN2A (40%) that are common in P
124 dren, in which there is frequent concomitant homozygous deletion of CDKN2A (five of seven cases).
126 In contrast, expression of CD8 or CD62L, homozygous deletion of CDKN2A/CDKN2B, NOTCH1 and/or FBXW
130 ion was derived from study of knockout mice: homozygous deletion of dab2 results in early embryonic l
132 gressive PDAC was observed in the setting of homozygous deletion of either p53 or p16(Ink4a), the lat
135 in 3 of 20 ovarian tumor samples, as well as homozygous deletion of exon 2 in the lung adenocarcinoma
139 al muscular atrophy (age 16-65 years) with a homozygous deletion of exons 7, 8, or both, or with comp
140 FoxO1(3A/LXXAA), those with cardiac-specific homozygous deletion of FoxO1 (c-FoxO1(-/-)), and beclin1
141 tumors induced by the Neu (ErbB-2) oncogene, homozygous deletion of Gab2 in mice had only a modest ef
147 and breast cancer were more consistent with homozygous deletion of GSTM1 or GSTT1, the AAgenotype of
151 naling and ADPKD cell proliferation in vitro Homozygous deletion of ILK in renal collecting ducts (CD
160 ns in the known NPHP genes, particularly the homozygous deletion of NPHP1 at 2q13, have been identifi
161 , these alterations are most commonly due to homozygous deletion of p16(INK4a) and less commonly due
162 EWS-FLI1 fusion type, p53 mutation, and homozygous deletion of p16/p14ARF have each been shown t
165 femoral artery mechanical injury, mice with homozygous deletion of p21Cip1 displayed accelerated pro
166 l injury was markedly increased in mice with homozygous deletion of p27(Kip1), characterized by promi
167 g Kras(G12D) activation with heterozygous or homozygous deletion of p53 (mean survival of 56 weeks vs
169 d mammary tumor formation in mice carrying a homozygous deletion of p53, uncovering a complex relatio
171 llele and mouse embryonic fibroblasts with a homozygous deletion of PERK exhibited attenuated phospho
177 tion conditions, which was associated with a homozygous deletion of PTEN, the first reported in MM.
180 iological roles of RINT-1, we found that the homozygous deletion of Rint-1 caused early embryonic let
183 otes UVB-induced skin tumorigenesis, whereas homozygous deletion of SIRT1 suppresses skin tumor devel
190 sis in mice skin in vivo using mice with the homozygous deletion of the C-terminal transcriptional ac
197 mouse embryo fibroblasts (MEF) or MEF with a homozygous deletion of the Gab1 gene (-/- MEF) with H(2)
199 T-ALL samples harbored either a mutation or homozygous deletion of the gene FBW7, a ubiquitin ligase
200 regulated by promoter hypermethylation or by homozygous deletion of the gene locus in certain cancers
201 tein, and chromosomal microarray confirmed a homozygous deletion of the group-specific component (GC)
208 further demonstrate that this loss is due to homozygous deletion of the miR-31-encoding gene that res
212 with a mild form of JS were found to have a homozygous deletion of the NPHP1 gene identical, by mapp
219 nctional connectivity.SIGNIFICANCE STATEMENT Homozygous deletion of the Pten gene in neuronal subpopu
220 cancer-prone, heterozygous APC mutant mice, homozygous deletion of the Rad52 gene suppressed tumor g
222 blated by siRNA or chicken DT40 cells with a homozygous deletion of the RNF4 gene displayed increased
225 of acute myeloid leukemia (AML) in mice with homozygous deletion of the upstream regulatory element (
228 PR/Cas9, we created a transgenic line with a homozygous deletion of TpnC41C and compared its phenotyp
229 n and reduced apoptosis, in situ Conversely, homozygous deletion of TRAP1 delays prostatic tumorigene
230 endent homozygous frameshift mutations and a homozygous deletion of two exons in PIEZO2 that segregat
232 when donor and recipient were mismatched for homozygous deletion of UGT2B17, a gene expressed in GVHD
233 gene (UNC5B(-/flox)) and mice with targeted homozygous deletion of UNC5B in kidney epithelial cells
234 in human colorectal cancer (CRC) cells with homozygous deletion of VEGF alleles to determine the pot
239 elated genes such as MYC, ID3, and DDX3X and homozygous deletions of 9p21/CDKN2A, whereas other cases
240 alyses showed that all affected patients had homozygous deletions of a single SNP (rs721575) and thei
242 fetal liver (FL) cells from mice containing homozygous deletions of both STAT5a and STAT5b genes (ST
243 expressing Cre-recombinase to generate focal homozygous deletions of Cbp in the nucleus accumbens (NA
248 ific alterations included amplifications and homozygous deletions of genes not yet implicated in epen
249 expressing Cre recombinase to generate focal homozygous deletions of Hdac3 in area CA1 of the dorsal
252 f nephronophthisis cases are caused by large homozygous deletions of NPHP1, but six genes responsible
256 ulation of murine embryonic fibroblasts with homozygous deletions of the c-src, fyn, and yes genes fa
260 e found 28% to 45% hemizygous and 15% to 57% homozygous deletions of the OLFM4 gene via fluorescence
262 that biallelic PTEN inactivation, by either homozygous deletion or deletion of one allele and mutati
265 rvival motor neuron protein (SMN) due to the homozygous deletion or rare point mutations in the survi
266 d adenoid cystic carcinomas reported to have homozygous deletion or significant underexpression of AS
268 ructural signatures that distinguish between homozygous deletions over recessive cancer genes and fra
272 s been identified in a 120-kb critical tumor homozygous deletion region (found in lung and breast can
273 a(2+)-channel complex, was identified in the homozygous deletion region of chromosome 3p21.3 in human
274 18 different ESTs localized adjacent to the homozygous deletion showed the presence of a transcript
275 o 18 kb) located on chromosome 22 and even a homozygous deletion smaller than 1 kb with high-resoluti
277 e that, whereas nuclear pore proteins of the homozygous deletion strain are devoid of O-GlcNAc, nucle
278 tive markers, we created approximately 3,000 homozygous deletion strains affecting 674 genes, or roug
279 all mice with Kras(G12D) activation and Pten homozygous deletion succumbed to cancer by 3 weeks of ag
280 Likewise, newly discovered PCR-validated homozygous deletions suggested candidate tumor-suppresso
281 r, the gene has not been reported to undergo homozygous deletion, suggesting that DICER1 is haploinsu
284 -stage, sarcomatous histology and P16/CDKN2A homozygous deletion to be significant independent advers
285 ration of tobacco use, the OR for p16(INK4A) homozygous deletion was 1.3 (95% CI, 0.5-3.0) and 1.9 (9
286 rian aging phenotype of the Wv mice, whereas homozygous deletion was accompanied by a compensatory in
288 n KLF5, and neither promoter methylation nor homozygous deletion was detected in any of the cell line
290 reviously characterized loci, two regions of homozygous deletion were found, one near the PTPRD locus
293 ach other, as irreversible mutations such as homozygous deletions were frequently not inherited from