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1  to gene duplication and loss (and sometimes horizontal gene transfer).
2 pecies represents a unique model for natural horizontal gene transfer.
3  inhibitory effect of changes in the code on horizontal gene transfer.
4  promoted their distribution across phyla by horizontal gene transfer.
5 om Fusarium oxysporum f. vasinfectum through horizontal gene transfer.
6  sterol biosynthesis genes with bacteria via horizontal gene transfer.
7 rine nutrient cycles, and act as vectors for horizontal gene transfer.
8 lycosyltransferase (gtr) operons acquired by horizontal gene transfer.
9 eased in complexity via gene duplication and horizontal gene transfer.
10 , twitching motility, biofilm formation, and horizontal gene transfer.
11 ith implications for genetic engineering and horizontal gene transfer.
12 teria cannot become resistant by mutation or horizontal gene transfer.
13 ere acquired by one or both lineages through horizontal gene transfer.
14 nvironmental conditions and by the action of horizontal gene transfer.
15 brane (monoderms), an important mechanism of horizontal gene transfer.
16 lso influences its evolution by facilitating horizontal gene transfer.
17  of other strains, indicating acquisition by horizontal gene transfer.
18 ferent strains, with many likely acquired by horizontal gene transfer.
19 ntragenomic but can also be acquired through horizontal gene transfer.
20 ment of the SBF transcription factor through horizontal gene transfer.
21 al mutations but has never been reported via horizontal gene transfer.
22 on bacterial cellular differentiation during horizontal gene transfer.
23 on biases, suggesting their acquisitions via horizontal gene transfer.
24 lates bacterial mutation, recombination, and horizontal gene transfer.
25 to mycoplasmas and have been disseminated by horizontal gene transfer.
26 e TgtA5 family is consistent with widespread horizontal gene transfer.
27 ncer of AT-rich genetic material acquired by horizontal gene transfer.
28 e primary AMR mechanisms result from SNPs or horizontal gene transfer.
29 nerally assumed that antibiotics can promote horizontal gene transfer.
30 ene tree error correction in the presence of horizontal gene transfer.
31 of a resistant lineage following mutation or horizontal gene transfer.
32  phylogenetic trees, even in the presence of horizontal gene transfer.
33 ly applicable to gene families unaffected by horizontal gene transfer.
34 omic plasticity, most probably maintained by horizontal gene transfer.
35  evolutionary escape through mutagenesis and horizontal gene transfer.
36 to bacteria that acquire the systems through horizontal gene transfer.
37 in Acanthamoeba castellanii probably through horizontal gene transfer.
38 diverse, and include adhesion, motility, and horizontal gene transfer.
39 interactions, and extensive lineage-specific horizontal gene transfer.
40 r of toxin-immunity pairs that is shared via horizontal gene transfer.
41 uggesting that the phages were integrated by horizontal gene transfer.
42 n, with lineage III being the best donor for horizontal gene transfer.
43 es that appear to be rearrayed in nature via horizontal gene transfer.
44 r RNA-based interactions between species and horizontal gene transfer.
45 ated organelles and demonstrates the role of horizontal gene transfer.
46 mbination, gene loss, gene duplications, and horizontal gene transfer.
47 ial resistance genes (ARGs) may be shared by horizontal gene transfer.
48 t hosts of resistance genes acquired through horizontal gene transfer.
49 les in antibiotic resistance, virulence, and horizontal gene transfer.
50 ence for transformation is a primary mode of horizontal gene transfer.
51 ay key roles in host ecology, evolution, and horizontal gene transfer.
52 of traits during this conserved mechanism of horizontal gene transfer.
53 s via host lysis and drive evolution through horizontal gene transfer.
54  implications for understanding evolution by horizontal gene transfer.
55 e mobile genetic elements that contribute to horizontal gene transfer.
56 atibility between nucleus and cytoplasm, and horizontal gene transfer.
57 argets of Cas nucleases but also can promote horizontal gene transfer.
58 jor role in bacterial evolution by promoting horizontal gene transfer.
59 tegies of host infection and phage-dependent horizontal gene transfer.
60 onary events including gene duplications and horizontal gene transfers.
61 mids drive genomic diversity in bacteria via horizontal gene transfer [1, 2]; nevertheless, explainin
62 obial genomes and often display hallmarks of horizontal gene transfer(10-12), the drivers of CRISPR d
63  baumannii, a species known to undergo rapid horizontal gene transfer, 16.2% of isolate pairs conside
64                                              Horizontal gene transfer accelerates bacterial adaptatio
65 erating ESBL-producing clones with continued horizontal gene transfer across genera, addressing this
66 ple gene acquisitions or losses and possibly horizontal gene transfer after the ancestral separation
67                                              Horizontal gene transfer allows organisms to rapidly acq
68 genase (DcmA) that has been acquired through horizontal gene transfer and allows the strain to grow o
69 s displayed upregulation of genes related to horizontal gene transfer and antibiotic resistance.
70 nas fluorescens (PfmqsA) is acquired through horizontal gene transfer and binds to a slightly differe
71 tion of molecular features are likely due to horizontal gene transfer and changes in serogroup distri
72                                     Frequent horizontal gene transfer and chromosomal integration eve
73                    It represents one mode of horizontal gene transfer and contributes to the spread o
74 e gain by genomes from other species through horizontal gene transfer and differential gene loss amon
75                                              Horizontal gene transfer and gene duplication allowed th
76 mes is highly dynamic and involves extensive horizontal gene transfer and gene loss(1-4).
77 uence of genetic exchange mechanisms such as horizontal gene transfer and genetic recombination.
78 es that impart genetic isolation by impeding horizontal gene transfer and now depend on the use of sy
79 tionary outcomes, with implications for both horizontal gene transfer and rational strain design.
80 e, and reconstruction of species trees under horizontal gene transfer and recombination events.
81        Cattle adaptation was associated with horizontal gene transfer and significant gene gain and l
82  of magnitude and evidence of recombination, horizontal gene transfer and variable fragment numbers.
83  assess the importance of extracellular DNA, horizontal gene transfer and viruses for the generation
84 tic environment is considered a hot-spot for horizontal gene transfer, and lake sediments offer the o
85 obally important microbes through mortality, horizontal gene transfer, and metabolic reprogramming.
86 esistance to viruses, genetic isolation from horizontal gene transfer, and prevention of environmenta
87              Natural transformation mediates horizontal gene transfer, and thereby promotes exchange
88 ts but also is due to their rapid evolution, horizontal gene transfers, and intimate interactions wit
89 ions of viral cross-kingdom interactions and horizontal gene transfer are proposed.
90 utative non-metazoan origin, indicating that horizontal gene transfers are frequent within this group
91                    Plasmids are vehicles for horizontal gene transfer between bacteria, and in Neisse
92 plays a clonal population structure in which horizontal gene transfer between different lineages is e
93                                              Horizontal gene transfer between Gram-positive bacteria
94                        The data suggest that horizontal gene transfer between vascular plants is not
95 -phage Acr proteins, demonstrating a role in horizontal gene transfer bolstered by broad-spectrum CRI
96 tance was independent of ARG acquisition via horizontal gene transfer but instead relied on antibioti
97 lutionary modes that differ in the extent of horizontal gene transfer by an order of magnitude.
98 mote the spread of antibiotic resistance via horizontal gene transfer by natural transformation.
99  ClpG disaggregase homologs acquired through horizontal gene transfer by the species Pseudomonas aeru
100  for the acquisition of secreted proteins by horizontal gene transfer can help predict emerging zoono
101                                              Horizontal gene transfer can speed up adaptive evolution
102 an additional 30 genus- and species-specific horizontal gene transfer candidates that might have cont
103 e effects of autoimmunity and curtailment of horizontal gene transfer caused by the defense systems a
104                   Furthermore, inferences of horizontal gene transfer connected viral lineages to div
105 wed the definition of gene gains and losses, horizontal gene transfers, conservation and evolutionary
106              Recombination, reassortment and horizontal gene transfer constitute examples of pervasiv
107  We propose that GH131-family expansions and horizontal-gene transfers contributed to this adaptation
108                                              Horizontal gene transfer contributes 3.5 % of the predic
109 in vB_RpoMi-Mini genome further implies that horizontal gene transfer could be an important driving f
110  and demonstrates a novel mechanism by which horizontal gene transfer directly impacts virulence thro
111                                              Horizontal gene transfer disrupts the phylogenetic signa
112 scuous spread of the mcr-1 gene by efficient horizontal gene transfer dominated by a limited number o
113 iral integration, a fundamental mechanism of horizontal gene transfer driving prokaryotic evolution,
114           Natural genetic transformation via horizontal gene transfer enables rapid adaptation to dyn
115  this lineage originated from a single large horizontal gene transfer event between CC23 and the hype
116 -adding enzymes of animals originated from a horizontal gene transfer event in the stem lineage of Ho
117 lysis of the Cpt gene family suggests that a horizontal gene transfer event introduced this gene into
118 that it may have been involved in an ancient horizontal gene-transfer event.
119 ollen transmission of organelles or multiple horizontal gene transfer events as the source of the mit
120 ding genes were acquired through independent horizontal gene transfer events from different donor bac
121 ell wall-modifying enzymes point at multiple horizontal gene transfer events from soil bacteria to ba
122 ian microbiota by engineering community-wide horizontal gene transfer events in situ.
123                    We also detected putative horizontal gene transfer events in the genome of R. micr
124  In addition to endosymbiotic gene transfer, horizontal gene transfer events occurring before, during
125 xpansin phylogeny shows evidence of multiple horizontal gene transfer events within and between bacte
126 exchange genetic material via phage-mediated horizontal gene transfer events, but, in turn, are vulne
127  in Earth history as a result of a series of horizontal gene transfer events, explaining the lack of
128 thotype Ro1, identify putative effectors and horizontal gene transfer events, map gene expression thr
129 is results from gene loss, recombination and horizontal gene transfer events.
130 lites and a considerable number of potential horizontal gene transfer events.
131 s indicate that the range for virus-mediated horizontal gene transfer extends beyond hosts to nonhost
132 17%) of genes originating through functional horizontal gene transfer (fHGT) and speculated that fHGT
133 o adapt to novel environments through single horizontal gene transfers (followed by regulatory adapta
134 suggest a previously unidentified benefit of horizontal gene transfer for bacteria.
135                    Despite the importance of horizontal gene transfer for rapid bacterial evolution,
136 oniae, an important human pathogen, mediates horizontal gene transfer for the development of drug res
137                       SlopeTree corrects for horizontal gene transfer, for composition variation and
138 last (apPOL) was putatively acquired through horizontal gene transfer from a bacteriophage and is cla
139 analyses have indicated their acquisition by horizontal gene transfer from a eukaryotic host.
140 n was co-opted by competent bacteria through horizontal gene transfer from a eukaryotic source, and l
141 ase (GS) III in the prasinophytes evolved by horizontal gene transfer from a member of the heterokont
142             Nitrosotalea common ancestor via horizontal gene transfer from acidophilic representative
143 related Aquificaceae likely acquired HARP by horizontal gene transfer from an archaeon.
144                  In the spirit of the times, horizontal gene transfer from bacteria to eukaryotes has
145             Although documented instances of horizontal gene transfer from bacteria to eukaryotes rem
146                         Twenty-four cases of horizontal gene transfer from bacterial sources were fou
147 mic deletion and insertion events as well as horizontal gene transfer from distant fungi.
148 s: some of them were likely acquired through horizontal gene transfer from extremophile bacteria whic
149 nts, including genes originally obtained via horizontal gene transfer from fungi and bacteria, contri
150            Our results provide evidence that horizontal gene transfer from Fusarium to Vd991 contribu
151 es (GT108) that have likely been acquired by horizontal gene transfer from gram-positive bacteria.
152                                              Horizontal gene transfer from plants to microbes and bet
153                                              Horizontal gene transfer from retroviruses to mammals is
154                                      We find horizontal gene transfers from bacteria and expansion of
155 c criteria that help to distinguish putative horizontal gene transfers from the admixture of genes fr
156 l differences in gene content resulting from horizontal gene transfer, gene duplication and gene loss
157                Our method efficiently models horizontal gene transfers, gene duplications and losses,
158                            This mechanism of horizontal gene transfer has been widely linked to the a
159                 Acquisition of genes through horizontal gene transfer (HGT) allows microbes to rapidl
160                                              Horizontal gene transfer (HGT) among bacteria, archaea,
161  Despite the importance of phages in driving horizontal gene transfer (HGT) among pathogenic bacteria
162                                  Genome-wide horizontal gene transfer (HGT) analysis showed P. persal
163 inary competency to acquire exogenous DNA by horizontal gene transfer (HGT) and adapt them into its g
164  and phylogenomics are subject to noise from horizontal gene transfer (HGT) and bias from convergence
165                                              Horizontal gene transfer (HGT) and gene loss result in r
166 rokaryotic genomic islands (GIs) involved in horizontal gene transfer (HGT) are the classical pathoge
167 ogical treatment can mitigate this path, but horizontal gene transfer (HGT) between bacteria also occ
168                                              Horizontal gene transfer (HGT) confers the rapid acquisi
169                      This particular type of horizontal gene transfer (HGT) could play a role in plan
170                                              Horizontal gene transfer (HGT) drives the evolution of r
171 hat mosquito RIP genes derived from a single Horizontal Gene Transfer (HGT) event, probably from a cy
172 re similar to CE1s of bacteria, suggesting a horizontal gene transfer (HGT) event.
173 rived from Actinobacteria through an ancient horizontal gene transfer (HGT) event.
174 omain-encoding genes through two independent horizontal gene transfer (HGT) events before the origin
175 most recent studies instead support multiple horizontal gene transfer (HGT) events to generate extant
176 ave been reported to have elevated levels of horizontal gene transfer (HGT) events, but how important
177                                              Horizontal gene transfer (HGT) facilitates spead of anti
178 her show that AIG1 may have been acquired by horizontal gene transfer (HGT) from a rhizobial fungus.
179 s that Th. elongatum has gained Fhb7 through horizontal gene transfer (HGT) from an endophytic Epichl
180 symmetron and Branchiostoma) acquired GFP by horizontal gene transfer (HGT) from copepods or cnidaria
181 nted, namely longer intergenic regions, post-horizontal gene transfer (HGT) gene fusions fostering co
182                                              Horizontal gene transfer (HGT) has been suggested to pro
183                                              Horizontal gene transfer (HGT) has long been seen as a c
184 ished cases that support the hypothesis that horizontal gene transfer (HGT) has played a role in the
185 ar gene transfer (IGT) or between species by horizontal gene transfer (HGT) has played an important r
186 ex." This assumes without justification that horizontal gene transfer (HGT) in bdelloids precludes th
187                       The role and extent of horizontal gene transfer (HGT) in eukaryotes are hotly d
188   Natural transformation is one mechanism of horizontal gene transfer (HGT) in Vibrio cholerae, the c
189 GTree database provides putative genome-wide horizontal gene transfer (HGT) information for 2472 comp
190 nsformation, represents a major mechanism of horizontal gene transfer (HGT) involved in the acquisiti
191                                              Horizontal gene transfer (HGT) is a major driving force
192                                              Horizontal gene transfer (HGT) is an important mechanism
193                                     Although horizontal gene transfer (HGT) is common in angiosperm m
194                                              Horizontal gene transfer (HGT) is frequent in parasitic
195                                              Horizontal gene transfer (HGT) is the non-inherited acqu
196                                              Horizontal gene transfer (HGT) is the sharing of genetic
197                                              Horizontal gene transfer (HGT) is the transfer of geneti
198                                        While horizontal gene transfer (HGT) is well documented in bac
199                                              Horizontal gene transfer (HGT) is widespread in the evol
200 cteria can exchange genetic material through horizontal gene transfer (HGT) mediated by plasmids and
201             Here, we investigate the in vivo horizontal gene transfer (HGT) of blaOXA-48 from Klebsie
202                                              Horizontal gene transfer (HGT) of mobile genetic element
203                                              Horizontal gene transfer (HGT) plays a key role in bacte
204                                              Horizontal gene transfer (HGT) plays a major role in the
205                                              Horizontal gene transfer (HGT) plays an important role i
206 microbiomes is lacking, with most studies of horizontal gene transfer (HGT) relying on bioinformatic
207  genes for kleptoplast-targeted proteins via horizontal gene transfer (HGT) that are not derived from
208 ns, making them prone to viral predation and horizontal gene transfer (HGT) through transformation an
209                                  Evidence of horizontal gene transfer (HGT) was observed in four indi
210 s from E. coli through several mechanisms of horizontal gene transfer (HGT), including conjugation an
211                                              Horizontal gene transfer (HGT), or the transfer of genes
212                                              Horizontal gene transfer (HGT), the movement of genetic
213 he gut, the invading strain evolves by rapid horizontal gene transfer (HGT), which precedes and outwe
214 ently happens by macrogenomic events such as horizontal gene transfer (HGT).
215 represented by bacteria capable of extensive horizontal gene transfer (HGT).
216 are event, with only a few known examples of horizontal gene transfer (HGT).
217 t also by acquiring foreign DNA, also called horizontal gene transfer (HGT).
218  ferns acquired neochrome from hornworts via horizontal gene transfer (HGT).
219  partly obscured by the massive influence of horizontal gene transfer (HGT).
220 nce of multidrug-resistant pathogens through horizontal gene transfer (HGT).
221 lasmids, promote bacterial evolution through horizontal gene transfer (HGT).
222 tutes a clear example of an ancient event of Horizontal Gene Transfer (HGT).
223                          The contribution of horizontal gene transfers (HGTs) from other bacteria to
224 ic elements that contribute substantively to horizontal gene transfer, host adaptation, and virulence
225 th of bacterial hosts containing ARGs and/or horizontal gene transfer immediately following slurry ap
226 val in extreme environments, and the role of horizontal gene transfer in animal evolution.
227                          Our work shows that horizontal gene transfer in bacteria can be promoted by
228 n in the chromosome) is a major mechanism of horizontal gene transfer in bacteria.
229  Transformation is a widespread mechanism of horizontal gene transfer in bacteria.
230 ate population diversity, recombination, and horizontal gene transfer in closely related Bp isolates,
231  transformation (NT) is a major mechanism of horizontal gene transfer in microbial species that promo
232             CRISPR-Cas provides a barrier to horizontal gene transfer in prokaryotes.
233  patterns of plasmids, reveals the impact of horizontal gene transfer in rapidly generating new patho
234                 We also provide evidence for horizontal gene transfer in the mammalian gastrointestin
235 ombination, indicating an important role for horizontal gene transfer in the recent evolution of pQBR
236        These results demonstrate the role of horizontal gene transfer in the recent metabolic innovat
237 utionary biology and biotechnology, enabling horizontal gene transfer in the wild and heterologous ex
238 rial appendages that play important roles in horizontal gene transfer, in spread of antibiotic resist
239                                              Horizontal gene transfer is a fundamental process in bac
240                                 Gene gain by horizontal gene transfer is a major pathway of genome in
241                                              Horizontal gene transfer is a means by which bacteria, a
242                                              Horizontal gene transfer is an important evolutionary me
243                                              Horizontal gene transfer is central to microbial evoluti
244 t a nuclear-encoded protein resulting from a horizontal gene transfer is targeted to a bacterial symb
245                                              Horizontal gene transfer is the primary driver in the di
246 ltiple ice binding proteins through putative horizontal gene transfer likely contributed to the origi
247  sexual reproduction is unknown in the FOSC, horizontal gene transfer may contribute to the observed
248 tribution of antibiotics to the promotion of horizontal gene transfer may have been overestimated.
249 s based on the protease domain suggests that horizontal gene transfer may have occurred from a single
250 s based on the protease domain suggests that horizontal gene transfer might have occurred from an ssR
251 k highlights an important limiting factor in horizontal gene transfer, namely, the capacity of the re
252 cusing on the primary evolutionary forces of horizontal gene transfer, natural selection, and migrati
253 E grouped YSLPVs with algae, suggesting that horizontal gene transfer occurred between giant viruses
254 ing adsorption or an increased potential for horizontal gene transfer of ARGs in the biofilm.
255 ogens and methanotrophs, along with frequent horizontal gene transfer of mcr genes between alkanotrop
256 r words, there must be pervasive and ongoing horizontal gene transfer of self-splicing introns into e
257 e rapid evolution of bacterial pathogens via horizontal gene transfer of virulence determinants.
258  the effect of antibiotic concentrations and horizontal gene transfer on risk; (2) compute total risk
259 of metabolic innovations were facilitated by horizontal gene transfers on earlier phylogenetic branch
260     The acquisition of new pathways, through horizontal gene transfer or genetic engineering, can hav
261  the safeguard by spontaneous mutagenesis or horizontal gene transfer, or because they can be circumv
262 n resistance in S. aureus can emerge through horizontal gene transfer originating from coagulase-nega
263 t miropin was acquired from the host through horizontal gene transfer, perhaps facilitated by the lon
264                                              Horizontal gene transfer permits rapid dissemination of
265  islands, e.g. DNA fragments that facilitate horizontal gene transfer phenomena, were identified.
266 f these enzymes and their paralogs, in which horizontal gene transfer played an important role.
267                                              Horizontal gene transfer plays a crucial role in microbi
268                                              Horizontal gene transfer plays a major role in bacterial
269                                              Horizontal gene transfer plays a major role in microbial
270                                              Horizontal gene transfer (primarily conjugation) could e
271 pproaches towards studying endosymbiotic and horizontal gene transfer processes, discusses the new kn
272                  The acquisition of genes by horizontal gene transfer provided new routes to handle t
273 cule repertoires of both have benefited from horizontal gene transfer, Pseudonocardia spp. have relie
274 ng that moderate selection pressure and high horizontal gene transfer rate are necessary to generate
275 are genetic as well as ecological drivers of horizontal gene transfer rates.
276 the mechanisms by which antibiotics modulate horizontal gene transfer remain poorly understood.
277 accurate inference of gene trees affected by horizontal gene transfer remains a largely unaddressed p
278 ion events, natural selection, and pervasive horizontal gene transfer result in population admixture
279  genes (ARGs) can spread among pathogens via horizontal gene transfer, resulting in imparities in the
280 ibiotics directly regulate the efficiency of horizontal gene transfer, serve as a selection force to
281      So, through the obtaining of this GI by horizontal gene transfer, strain SQR9 not only acquired
282 called pili for diverse behaviors, including horizontal gene transfer, surface sensing, motility, and
283 mong bdelloid rotifers is more likely due to horizontal gene transfer than to meiotic sex." This assu
284  and evolutionary drivers of and barriers to horizontal gene transfer that are likely to structure pa
285 CRISPR-Cas systems including their effect on horizontal gene transfer that can be either inhibitory o
286                                              Horizontal gene transfer through natural transformation
287 hage genomes rapidly evolve via mutation and horizontal gene transfer to counter evolving bacterial h
288                                          The horizontal gene transfer to loss ratio, but not duplicat
289 izable plasmid (pMobErm51), or both enabling horizontal gene transfer to susceptible organisms and co
290 ngeal glands, some of which were acquired by horizontal gene transfer, to manipulate host processes a
291                                              Horizontal gene transfer via plasmid conjugation is a ma
292 ed that pirAB(vp) may be lost or acquired by horizontal gene transfer via transposition or homologous
293                                         This horizontal gene transfer was mediated by a fraction of e
294                                 Ten cases of horizontal gene transfer were identified with evidence f
295 ed a 24 kb capsule synthesis island (cps) by horizontal gene transfer which consists of a synthetic l
296 yet several catalytic domains originated via horizontal gene transfer with gut bacteria.
297 res are characteristically mosaic, driven by horizontal gene transfer with other phages and host geno
298 erred events of homologous recombination and horizontal gene transfer within 79 bacterial species.
299 monstrate the role of the oral resistome and horizontal gene transfer within and between commensals i
300 e of function and ecology, underscoring that horizontal gene transfer without extensive regulatory ch

 
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