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1 ular features were unexplained by LS or MLH1-hypermethylation.
2 on, reduced CTCF binding, and Txnip promoter hypermethylation.
3 cts the different modes of cancer CpG island hypermethylation.
4 nocortical tissues, which is a result of CpG hypermethylation.
5 pressed genes (458) and miRNA (0) and genome hypermethylation.
6 hose repressed by CNOT3 binding and promoter hypermethylation.
7 TGCTs show focal recurrent imprinted domain hypermethylation.
8 loss of GPC5 expression was regulated by its hypermethylation.
9 ation punctuated by regions of glia-specific hypermethylation.
10 correlated better with gene expression than hypermethylation.
11 histone demethylases, to cause broad histone hypermethylation.
12 factors that prevent gene repression and DNA hypermethylation.
13 ating activity, resulting in whole-blood DNA hypermethylation.
14 ched peripheral blood of patients with tumor hypermethylation.
15 s, but in cancer a proportion are subject to hypermethylation.
16 pecific loci by somatic mutation(3,4) or DNA hypermethylation(5) results in the loss of loop anchors
17 lecular level, it results in progressive DNA hypermethylation across domains marked by H3K27me3 and b
18 demonstrated that miR-34A was inactivated by hypermethylation across many histologic types of primary
20 ation-induced epigenetic alterations and DNA hypermethylation alterations observed in inflammation-in
21 ity, including mutations that lead to 6-fold hypermethylation and 3-fold hypomethylation of the human
22 or maximally reversing abnormal promoter DNA hypermethylation and associated gene silencing to reexpr
24 etic landscape of cancer includes both focal hypermethylation and broader hypomethylation in a genome
25 B1 and RAB25 are downregulated with promoter hypermethylation and CA9 is upregulated with promoter hy
26 r, H19-deficient pre-HSCs displayed promoter hypermethylation and concomitant downregulation of sever
27 base domains defined by gene activation, CpG hypermethylation and depletion of Polycomb-mediated H3K2
28 esults in DNMT3b induction and MEG3 promoter hypermethylation and expression inhibition, further redu
30 Upon excluding patients with MLH1 promoter hypermethylation and germline mutations, biallelic somat
32 arate (2-HG), which leads to DNA and histone hypermethylation and impaired hematopoietic differentiat
34 l application also inhibited UVB-induced DNA hypermethylation and its elevation of the levels of TET
35 These genes are silenced, predominantly by hypermethylation and less frequently by mutations, and d
38 kdown of the Fos ecRNA locus results in gene hypermethylation and mRNA silencing, and hippocampal exp
39 ly, the profibrotic factor TGF-beta1 induced hypermethylation and repression of erythropoietin in per
40 d a novel epigenomic subtype associated with hypermethylation and somatic mutations in TET2, DNMT3B,
43 nch syndrome, 2 of 10 (20%) tumors with MLH1 hypermethylation, and 12 of 78 (15%) tumors with microsa
44 icient by IHC of which 83/132 (63%) had MLH1-hypermethylation, and 16/49 (33%) of the remaining patie
45 ine or Dnmt1-siRNA), prevented Mfn2 and Mlh1 hypermethylation, and ameliorated retinal dysfunction an
46 Microsatellite instability, MLH1 promoter hypermethylation, and germline testing of additional gen
48 loss of DNA methylation and CpG island (CGI) hypermethylation are key epigenomic aberrations in cance
51 At TSGs, CHD4 retention helps maintain DNA hypermethylation-associated transcriptional silencing.
54 e show that human IDH mutant gliomas exhibit hypermethylation at cohesin and CCCTC-binding factor (CT
55 e oxytocin signaling pathway induced by OXTR hypermethylation at CpG 5,6 leads to atypical developmen
59 X1 in HCC was attributed to a combination of hypermethylation at its promoter as well as histone modi
61 latin resistance was associated with loss of hypermethylation at several CpG sites primarily localize
62 ethylator phenotypes (CIMPs), defined as DNA hypermethylation at specific CpG islands in subsets of t
64 f DNMT3B in TKO hESCs partially reverses the hypermethylation at the PAX6 promoter and improves diffe
65 tin immunoprecipitation assay confirmed that hypermethylation at the promoter IV region of CIITA is m
66 repressive chromatin marks and aberrant DNA hypermethylation at TSSs in combination with MYC network
70 erasure, NSEs harbor a malignancy-associated hypermethylation core, akin to that of a diverse cancer
71 our findings provide evidence that ODC1 gene hypermethylation could be a starting point for the onset
72 2, and SLC16A5) was associated with promoter hypermethylation, decreased chromatin accessibility, and
73 owth factor beta treatment induced gene-body hypermethylation, dissociation of DNMT1 from the promote
74 eaves at three developmental stages revealed hypermethylation during leaf senescence in dml3 compared
75 fine a fumaric acid ester treatment-specific hypermethylation effect on microRNA MIR-21, which is cri
78 differential MGMT methylation profiles, MGMT-hypermethylation enhanced genetic and phenotypic plastic
81 ariations, most often recognized as promoter hypermethylation events that lead to gene silencing, are
84 n inhibitor of DNA methyltransferase and DNA hypermethylation, has shown treatment efficacy against m
86 quently, Tet1 and Tet2 deletion led to Foxp3 hypermethylation, impaired Treg cell differentiation and
87 investigated the frequency of BRCA1 promoter hypermethylation in 237 triple-negative breast cancers (
88 vealed frequent (>45%) cancer-associated DNA hypermethylation in 9 of 11 (82%) tumor types screened.
91 IDH2, and CEBPA were strongly linked to DNA hypermethylation in AML using a novel integrative analys
93 DS fetal cortices and observed a significant hypermethylation in approximately 4% of probes in the DS
94 on in peripheral and mucosal tissues and DNA hypermethylation in CD patients requiring surgical inter
95 ffect was mediated by BBP-induced global DNA hypermethylation in CD4(+) T cells of the offspring beca
96 of GULP1 was associated with GULP1 promoter hypermethylation in cell lines and primary tumors, and a
100 d the expression of CIITA/MHC-II by inducing hypermethylation in histone H3 lysine 9 (H3K9me2/3).
101 oxidative stress, suggesting the role of DNA hypermethylation in inactivation of MSH2 expression and
103 Interestingly, we further observed promoter hypermethylation in key overexpressed genes and correspo
105 1 expression, and the entire locus underwent hypermethylation in LUAD, leading to loss of expression.
109 genome-wide repetitive LINE-1 elements, and hypermethylation in specific promoter regions of single-
110 Both 5hmC in wild-type (WT) genomes and DNA hypermethylation in TET-deficient genomes are largely co
112 the effect of a putative persistent Ddo gene hypermethylation in the brain, we used Ddo knock-out mic
114 at LTF expression is silenced via CpG island hypermethylation in the early stages of prostate tumorig
115 ls owing to an increased DNA copy number and hypermethylation in the H19 promoter of the IGF2 gene.
116 e findings provide initial evidence for OXTR hypermethylation in the intron area as a potential bioma
118 ealed a significant excess of age-associated hypermethylation in the rDNA relative to other segments
121 ionally, IDH(mut) caused a greater degree of hypermethylation in undifferentiated neural progenitor c
122 DNA methyltransferase 1 (DNMT1) and a global hypermethylation in vascular endothelium subjected to di
124 isulfite sequencing confirmed dense promoter hypermethylation indicative of silencing in multiple mal
126 ced Dnmt3b expression induced widespread DNA hypermethylation inMyc-Bcl2-induced leukemias, preferent
127 T3A(R882), while DNMT3A-dependent CpG island hypermethylation is a consequence of AML progression.
131 ysis of genome sequence data showed that the hypermethylation is associated with expansion of a GGC r
134 ionally, we observe that promoter CpG island hypermethylation is not restricted solely to emerging na
135 C hypermethylation is dispensable while H3K9 hypermethylation is required for this differentiation bl
138 e changes are often correlated with promoter hypermethylation, leading to decreased expression of tum
139 ntly reported that HPV E7-dependent promoter hypermethylation leads to downregulation of the chemokin
140 corneal endothelial cells in which miR-199B hypermethylation leads to miR-199b-5p downregulation and
141 ypomethylation-high expression genes and 168 hypermethylation-low expression genes were identified at
142 n a DNMT3A-dependent manner, suggesting that hypermethylation may be a response to, rather than a cau
144 dy suggests that loss of UQCRH expression by hypermethylation may promote kidney carcinogenesis throu
146 ith healthy controls implying that LINC00299 hypermethylation may serve as a circulating biomarker fo
147 f global hypomethylation coupled to regional hypermethylation observed in diverse cancer genomes, and
148 A methylation changes, including significant hypermethylation, occur more frequently in early colonic
149 ts and observed widespread aberrant cytosine hypermethylation occurring preferentially outside CpG is
150 dicated that 5mC changes are localized, with hypermethylation occurring within a background of genome
152 53, RB1, CYLD, AR) and epigenomic (hypo- and hypermethylation of 20 differential sites) alterations a
154 es with enhanced DCL4(NLS) expression, while hypermethylation of a DCL4 transgene causes a reduction
155 but not E6 transfection of NOK cells led to hypermethylation of a positively correlated CpG island w
156 CRPC-NE-associated epigenetic changes (e.g., hypermethylation of ASXL3 and SPDEF; hypomethylation of
157 les, and demonstrate that the conjunction of hypermethylation of bivalent chromatin and up-regulation
161 genomic-imprint and DPPA3 erasure, recurrent hypermethylation of cancer-associated targets, and subty
162 eride concentrations (MR, P=1.5x10(-14)).and hypermethylation of cg02079413 (SNORA54; NAP1L4) was ass
169 ecifically, we show that mutant PPM1D drives hypermethylation of CpG islands throughout the genome an
170 activity of mutant IDH2 proteins results in hypermethylation of DNA and histones, leading to blocked
171 epigenetic program that is characterized by hypermethylation of DNA methylation valleys that are cha
172 ce and distribution of 5hmC, which prevented hypermethylation of DNA, and for regulation of the B cel
174 east tissue, parity has been associated with hypermethylation of FOXA1, a pioneer transcription facto
175 om patients with TB are characterized by DNA hypermethylation of genes critical to mycobacterial immu
178 pression by ASC adipokines leads to promoter hypermethylation of GJA1 and related genes in the endome
179 an endometrial cancer cohort (n = 141), DNA hypermethylation of GJA1 and related loci TJP2 and PRKCA
180 These results suggest that the age-dependent hypermethylation of GRSF1 reduces its expression, which
181 EAP1-NRF2 signaling in UCB and that promoter hypermethylation of GULP1 is a potential mechanism of GU
182 deficient diet reduced proliferation and DNA hypermethylation of hepatocytes and HCC cells, and the C
184 lysine demethylase KDM4B results in aberrant hypermethylation of histone 3 lysine 9 (H3K9) at loci su
185 E methylation accumulate SAM, which leads to hypermethylation of histones and the major phosphatase P
186 DNA methylome analysis revealed excessive hypermethylation of iCCA, affecting primarily the bivale
187 SKIP gene (SPHKAP) expression is silenced by hypermethylation of its promoter in acute myeloid leukem
190 ition of progesterone signaling is caused by hypermethylation of its receptor Pgr by Notch1 overexpre
192 of good glycemia had no beneficial effect on hypermethylation of Mfn2 and Mlh1 and retinal function (
193 a-analysis to assess the association between hypermethylation of MGMT promoter and the risk of breast
194 in the level of histone H3 acetylation, and hypermethylation of MSH2 promoter were also observed in
196 lation of the TP63N transcriptional network, hypermethylation of pancreatic endodermal cell-fate dete
197 h differential expression of ANO1, we showed hypermethylation of positively correlated CpG islands po
200 y global hypomethylation in conjunction with hypermethylation of promoter CpG islands; these changes
203 of ocular tissue-specification and described hypermethylation of retinal transcription factors (i.e.,
206 n (r = -0.96; P < 10-8) and characterized by hypermethylation of targets of the polycomb repressor co
207 bundance of 24-nt siRNAs was associated with hypermethylation of TEs and gene promoters, with influen
212 lated region (UTR) hypomethylation and 3'UTR hypermethylation of the cellular epitranscriptome, regul
214 leads to suppression of the E2F1 pathway and hypermethylation of the CpG sites at miR-184 promoter, r
217 omatal lineage cells, which is linked to DNA hypermethylation of the ERECTA family genes, including E
218 cumulation of 2-hydroxyglutarate resulted in hypermethylation of the Foxp3 gene locus and inhibited F
223 and found that the patients with TB have DNA hypermethylation of the IL-2/STAT5, TNF/NF-kappaB, and I
224 ink between fumaric acid ester treatment and hypermethylation of the MIR-21 locus in both CD4 and CD8
225 ; several lipid metabolism mRNAs; coincident hypermethylation of the PPARgamma2 proximal promoter; an
230 sis behind one such predictive model linking hypermethylation of the UBB ubiquitin gene to a dependen
232 moter activity regardless of TPM status, and hypermethylation of THOR counteracted this repressive fu
234 Exposing cancer cells to metformin leads to hypermethylation of tumor-promoting pathway genes and co
235 howed that PSTVd infection promotes a strong hypermethylation of TYLCSV DNA, thus supporting a mechan
236 tic effects of depressive disorder and NR3C1 hypermethylation on long-term cardiac outcomes in ACS we
238 tellite instability not attributable to MLH1 hypermethylation or germline mutations contain 2 or more
239 tly, a small subset of genes that showed DNA hypermethylation or hypomethylation was correlated with
240 reduced BRCA1 transcription, due to promoter hypermethylation or loss of the BRCA1 transcriptional re
241 Lynch syndrome while 106 (9.0%) have somatic hypermethylation or mutations in the mismatch repair gen
242 r carcinomas (HCC) exhibit distinct promoter hypermethylation patterns, but the epigenetic regulation
244 (R)-2-hydroxyglutarate (2-HG), leading to a hypermethylation phenotype that dysregulates hematopoiet
246 unD was epigenetically regulated by promoter hypermethylation, post-translational modification of his
248 pomethylation profile with a selective small hypermethylation profile located in open-sea regions in
250 with a genome-wide tendency for neuronal CpG-hypermethylation punctuated by regions of glia-specific
251 tic mutations of BRCA1/BRCA2, BRCA1 promoter hypermethylation, RAD51C hypermethylation or biallelic l
253 ither chromatin reader activity reverses DNA hypermethylation, reactivates epigenetically silenced tu
254 rived neurotrophic factor), leading to their hypermethylation, reduced expression, as well as the beh
255 he tumor suppressor gene RASSF1A by promoter hypermethylation represents a key event underlying the i
257 ll lines, we demonstrated that aberrant ASNS hypermethylation sensitizes subsets of gastric and hepat
258 tifies a myeloid-specific smoking-associated hypermethylation signature enriched for DNase Hypersensi
259 lon-derived organoids, we show that promoter hypermethylation spontaneously arises in cells mimicking
260 Mismatch repair (MMR), IHC, and promoter hypermethylation status of MLH1 (MLH1ph) in microsatelli
262 on is silenced in prostate tumorigenesis via hypermethylation, supporting a role for LTF as a prostat
263 mors harboring TERT promoter mutation and/or hypermethylation than those without either aberration (P
264 nephritis via a mechanism involving promoter hypermethylation that is associated with Ifitm3 repressi
265 s with wild-type DNMT3A displayed CpG island hypermethylation, this change was not associated with ge
266 on in tumors was 10 times more frequent than hypermethylation, three times more frequent in CLL than
268 tent and targets of IDH(mut)-induced genomic hypermethylation vary greatly according to the cellular
269 on was attributed to nickel-induced promoter hypermethylation via elevating DNMT3b expression, wherea
279 utaneous T-cell lymphoma cell line, promoter hypermethylation was shown to downregulate MTAP expressi
281 miR-508-3p down-regulation, due to promoter hypermethylation, was directly correlated with metastati
283 e similar to those in mammals, and hypo- and hypermethylation were predictive of increased and decrea
286 bal hypomethylation but with skewing towards hypermethylation when interrogating gene promoters.
287 i depicted hypomethylation, and 225 depicted hypermethylation, whereas in Monos, 155 hypomethylated l
288 ydroxyglutarate resulting in DNA and histone hypermethylation, which leads to blocked cellular differ
289 d DNMT3B binding is associated with promoter hypermethylation, which precipitates a neural differenti
290 ed hypoxia in mouse breast tumours increases hypermethylation, while restoration of tumour oxygenatio
297 eparated cell data shows that IBD-associated hypermethylation within the TXK promoter region negative
298 such as global hypomethylation and localized hypermethylation, within the promoters of tumor suppress
299 (hESCs) exhibit prominent bivalent promoter hypermethylation without an overall corresponding decrea