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1 report the synthesis and characterization of isobaric aldehyde reactive tags (iARTs) for glycan quant
2 des and proteins including discrimination of isobaric amino acid residues and site determination of p
5 n-emission pattern observed from the T = 3/2 isobaric-analogue state in rubidium-73, which is identic
6 oubly sodiated adducts ([M + 2Na - H](+)) of isobaric and coeluting steroid metabolites allowed their
7 f measured sphingolipids by resolving nearly isobaric and isobaric species; this is accomplished by a
8 de liquid chromatography-like separations of isobaric and isomeric compounds in a fraction of the tim
9 curately separating and identifying the many isobaric and isomeric lipids and metabolites that can co
10 ics workflow is its ability to separate many isobaric and isomeric lipids that by standard shotgun li
11 aks from metabolite signal and separate both isobaric and isomeric metabolites with different distrib
12 ilitate correct lipid assignments among many isobaric and isomeric species independent of the resolut
13 fy and image both abundant and low-abundance isobaric and isomeric species within each m/z window.
14 s remains a challenge due to the presence of isobaric and isomeric species, which greatly complicates
16 jor histone marks and discrimination between isobaric and nearly isobaric PTMs such as trimethylation
17 tion is the effective chemical separation of isobaric and polyatomic interferences prior to sample in
19 he analysis of a mixture consisting of three isobaric antidepressants demonstrated the performance of
23 a 3.0 performs label-free quantification and isobaric chemical labeling quantification in addition to
28 s analyses is complicated by the presence of isobaric coeluting peptides, as they generate the same e
30 chemical assignment owing to the presence of isobaric compounds and, depending on mass resolution, io
31 ry (FTMS) allows to distinguish between most isobaric compounds as well as to unambiguously determine
36 omile during subcritical water extraction in isobaric conditions (45 bar) at seven different temperat
37 e) was subjected to processing at isothermal-isobaric conditions at temperatures from 30 to 80 degree
39 d into the cross-linker design, allowing for isobaric cross-linked peptide pairs originating from dif
40 publications, mainly due to the presence of isobaric cross-linked species, an incomplete fragmentati
43 dy at Leuven University Hospital with graded isobaric distentions before and after a liquid meal.
45 of saccharides and other parameters such as isobaric expansion coefficients, interaction coefficient
47 ntent and detected, for the first time, some isobaric forms of natural (+)-pinoresinol and (+)-1-acet
50 GlcCer and GlcSph from the far more abundant isobaric galactosyl epimers naturally occurring in white
51 ere chromatographically separated from their isobaric galactosylceramide (GalCer) counterparts using
56 iquid water's isothermal compressibility and isobaric heat capacity, and the magnitude of its thermal
57 ermal stability against crystallization upon isobaric heating at pressure 0.1 <= P <= 1.9 GPa is comp
60 e transition to air-breathing at birth using isobaric hypoxic chambers without alterations to materna
62 thod includes the chemical separation of Zr (isobaric interference of (90)Zr) from the samples follow
63 2 x 10(-12) for Ba was achieved, making the isobaric interference of Ba isotopes to the measurement
64 hes using ICP methods for chlorine isotopes, isobaric interference of the (36)ArH dimer with (37)Cl w
67 e is ensuring removal of barium to eliminate isobaric interferences arising from (135)Ba and (137)Ba.
69 curate detection is the effective removal of isobaric interferences from (135)Ba and (137)Ba prior to
71 ion accurate mass analysis by elimination of isobaric interferences, a fundamentally different concep
72 electron energy of 35 V for Ne to eliminate isobaric interferences, and a higher electron energy for
75 tiple charge state distributions can lead to isobaric interferences, mass spectral congestion, and am
76 atrix interferences, spectral interferences, isobaric interferences, polyatomic interferences, and ab
77 ther, it is demonstrated that, despite small isobaric interferences, results obtained at low mass res
84 challenges (i.e., competitive ionization and isobaric ion overlap) were explored and analyzed with LC
86 bsequently, we demonstrate that isomeric and isobaric ions can be selectively monitored online with l
87 rmation (Delta(f)H) obtained by QCC for some isobaric ions from the electron ionization (EI)-MS mass
90 pancies are explained by the presence of two isobaric ions, one due to (13)C and the other due to the
95 spectrometry measurements revealed that two isobaric isomers of a dimeric oxidation product were for
96 in laboratory studies and the occurrence of isobaric isomers, a complete assignment for individual M
97 using molecular dynamics simulations in the isobaric-isothermal ensemble, confirming our thermodynam
100 a method that purposely uses high amounts of isobaric label (levels that induce denaturation) to enha
102 , namely, QMIX (Quantitation of Multiplexed, Isobaric-labeled cross (X)-linked peptides) by integrati
103 This simple boosting to amplify signal with isobaric labeling (BASIL) strategy increased the overall
104 blocking peptide amino groups from isotopic/isobaric labeling and changing peptide charge states, re
106 eat excitement, the underlying technologies (isobaric labeling and mass spectrometry (MS)) have techn
108 Combinatorial Isobaric Mass Tags (CMTs), an isobaric labeling architecture with the unique ability t
109 process includes abundant protein depletion, isobaric labeling at the peptide level for multiplexed r
113 of the collection, we have used multiplexed isobaric labeling for quantitative proteomics to derive
117 quantification information than traditional isobaric labeling methods (e.g., TMT and iTRAQ) by makin
119 proteome and phosphoproteome via multiplexed isobaric labeling proteomics technology, computational p
120 CMT with respect to a commercially available isobaric labeling reagent with preserved quantitative ac
123 The use of tandem mass tags (TMT) as an isobaric labeling strategy is a powerful method for quan
125 y on-resin protein digestion and multiplexed isobaric labeling to facilitate liquid chromatography-ta
126 roplet technology with tandem mass tag (TMT) isobaric labeling to significantly improve analysis thro
128 s spectrometry, relative quantification with isobaric labeling, iTRAQ(TM), was used to compare the re
138 with highly sensitive tandem mass tag (TMT) isobaric mass spectrometry and hierarchical Bayesian ana
141 bottom-up, shotgun proteomics technologies (isobaric mass tags for relative and absolute quantificat
143 rk we evaluated the performance of the TMT10 isobaric mass tags on the Q Exactive Orbitrap mass spect
144 chromatin, extended multiplexing capacity of isobaric mass tags, state-of-the-art mass spectrometry m
146 were compared with wild-type cells using an isobaric mass-tag quantitative proteomics approach to id
147 00 also aided in the differentiation of near isobaric metabolites, but higher MS resolution reduced t
150 a mixture of the two amino acid ions and the isobaric mixture of [PC P-18:0/22:6] and [PC 19:0/19:0]
151 technology is demonstrated with isomeric and isobaric mixtures (e.g., 4-methoxy-1-naphthoic acid, 2-m
152 ied for quantitative identification of exact isobaric molecules in their mixtures, which is one of th
153 chemical tags, we designed a class of novel isobaric multiplex reagents for carbonyl-containing comp
154 enges to mass spectral analysis due to their isobaric nature and their lability in the gas phase, as
155 e subjected to HPP (130-530 MPa) under quasi-isobaric non-isothermal conditions (15 min; 0, 4.6 and 9
156 paration inlet for MS, capable of separating isobaric oligosaccharide isomers prior to MS detection a
157 (IMS) has been shown to effectively resolve isobaric oligosaccharides, but the utility of IMS to obt
160 This strategy requires consideration of isobaric overlaps which may also result from various add
162 arent specific volumes (varphiVsp), standard isobaric partial molar expansibility (varphiE(0)) and it
163 distinct reactivity to separate isomeric and isobaric PC and PE cations present in mass spectra of li
164 ssue demonstrating the separation of closely isobaric [PC(32:0) + Na](+) and [PC(34:3) + H](+) (3 mDa
166 g the optimized AP-DTIMS-Orbitrap MS system, isobaric peptide and sugar isomers were successfully res
169 ic fine structure information of a number of isobaric peptide pairs, including a pair of peptides ori
170 diDO-IPTL approach combines two advances in isobaric peptide terminal labeling (IPTL) methodology: f
173 we present a selective maleylation-directed isobaric peptide termini labeling (SMD-IPTL) approach fo
175 mine our data set and quantify 16 additional isobaric peptides commonly not targeted during DDA exper
176 data remining to later identify and quantify isobaric peptides unknown at the time of the LC-MS exper
179 eparation and identification of isomeric and isobaric phospholipids that are difficult to separate in
181 ision cross sections), we further resolved 5 isobaric pigments, not resolved by UHPLC-UV-MS(E) alone.
182 PLTX, in 25% of them only OVTX-a, -d, -e and isobaric PLTX were present, while 4% produced only OVTX-
183 strains contained OVTX-a to -e, OVTX-g, and isobaric PLTX, in 25% of them only OVTX-a, -d, -e and is
188 d discrimination between isobaric and nearly isobaric PTMs such as trimethylation and acetylation.
193 sequencing of mAbs is the discrimination of isobaric residues (Xle): leucine (Leu) and isoleucine (I
195 rters by intervals of 6 mDa yields a 12-plex isobaric set that preserves the synthetic simplicity and
196 f chemical noise and separation of coeluting isobaric species across the entire analytical space.
197 of a multifaceted approach for the study of isobaric species and elucidates why previous MDA studies
198 and the fatty acyl moiety produces many more isobaric species and fragments than for other lipid cate
199 -MS workflow and maximized the separation of isobaric species and the signal-to-noise ratio in direct
201 slead conclusions, especially in cases where isobaric species exhibit different distributions within
202 but are limited by the inability to resolve isobaric species such as linkage and positional isomers.
204 mplex molecules comprising many isomeric and isobaric species, necessitating detailed analysis to ena
212 hingolipids by resolving nearly isobaric and isobaric species; this is accomplished by a use of (i) a
213 r difficult to separate structurally related isobaric species; thus, it provides additional selectivi
215 clear state is thus characterized by a total isobaric spin T and a projection T(z)-two quantities tha
217 that is able to identify and distinguish the isobaric structures of complex and hybrid N-glycans flan
219 porter ions from quaternary amine containing isobaric tag for glycan (QUANTITY) isobaric tags are use
220 resent QUANTITY (Quaternary Amine Containing Isobaric Tag for Glycan), a quantitative approach that c
222 we combined (i) the power of unbiased iTRAQ (isobaric tag for relative and absolute quantification) m
223 pidemiology, and End Results (SEER) program, Isobaric tag for relative and absolute quantitation (iTR
227 frozen and OCT-embedded tissues using iTRAQ (isobaric tag for relative and absolute quantitation) lab
229 ntitative proteome analysis was performed by isobaric tag for relative and absolute quantitation-labe
232 ics was performed with tandem mass tag (TMT) isobaric tag labeling and nanoflow liquid chromatography
234 ne this modulation in HIV infection, we used isobaric tag-based mass spectrometry to quantify changes
239 egy combined precursor isotopic labeling and isobaric tagging (cPILOT) for higher-throughput analysis
240 Combined precursor isotopic labeling and isobaric tagging (cPILOT) is an enhanced multiplexing st
241 oach combining tandem mass-spectrometry with isobaric tagging (iTRAQ) and multiple database searching
244 yzed proximity labeling can be combined with isobaric tagging and mass spectrometry to enable quantit
253 ffective alternative to expensive commercial isobaric tagging reagents, we developed our own custom N
254 6L1G) and quantified the phosphoproteome by isobaric tagging using tandem mass tag liquid chromatogr
255 fication was carried out using eight channel isobaric tagging with iTRAQ reagent, and proteins were i
258 otein quantification, referred to as Caltech isobaric tags (CITs), which offer several advantages in
261 vances in multiplexed quantitation utilizing isobaric tags (e.g., TMT and iTRAQ) have the potential t
262 ometry-based approach using a combination of isobaric tags and heavy-labelled standard peptides, to c
263 y stable isotope labeling approaches such as isobaric tags and stable isotope labeling of amino acids
264 ontaining isobaric tag for glycan (QUANTITY) isobaric tags are used for quantification of the relativ
266 using novel 10-plex reporter ion-containing isobaric tags for multiplexed amine metabolite analysis.
268 baric tags (e.g., tandem mass tags (TMT) and isobaric tags for relative and absolute quantification (
269 c labeling, such as Tandem Mass Tag (TMT) or Isobaric Tags for Relative and Absolute Quantification (
270 ested with trypsin, labeled using eight-plex isobaric tags for relative and absolute quantification (
271 pletion of the most abundant serum proteins, isobaric tags for relative and absolute quantification w
272 teins were identified in tomato leaves using isobaric tags for relative and absolute quantitation (iT
274 with isotopic labeling strategies employing isobaric tags for relative and absolute quantitation (iT
275 proteins (DEPs) during EPS production using isobaric tags for relative and absolute quantitation (iT
276 mical tags (e.g., tandem mass tags (TMT) and isobaric tags for relative and absolute quantitation (iT
278 allotetraploids and their progenitors using isobaric tags for relative and absolute quantitation (iT
279 underlie this hypoxic heart phenotype, using isobaric tags for relative and absolute quantitation (iT
280 s response of L. plantarum strains using the isobaric tags for relative and absolute quantitation (iT
282 synaptic hippocampal protein content (iTRAQ (Isobaric Tags for Relative and Absolute Quantitation) an
283 ts association with membranes, an iTRAQ (for isobaric tags for relative and absolute quantitation)- b
287 sed the reproducibility of the AutoTip using isobaric tags for relative N-linked glycan quantificatio
288 of multiple Yn fragment ions that carry the isobaric tags from the inclusion list in the MS/MS/MS sc
289 e target peptide were labeled with the three isobaric tags giving nine 6-plex reactions for 54-plex q
290 , we show that labeling corona proteins with isobaric tags in their native conditions and analyzing t
291 combines cost-effective mass difference and isobaric tags to enable simultaneous construction of an
293 oxyTMT) reagents are recently commercialized isobaric tags which enable relative quantitation of up t
297 gn and synthesis of a proline-based reporter isobaric Tandem Mass Tag structure (TMTpro) is presented
298 ome of tankyrase double knockout cells using isobaric tandem mass tags reveals targets of degradation
300 as MALDI matrix clusters are often nominally isobaric with multiple metabolite ions, requiring high r