ライフサイエンスコーパス: microsatellite loci

1 eds and a closely related wild species at 23 microsatellite loci.

2 cent migration across volcanoes using eleven microsatellite loci.

3 tDNA (771 bp), nuclear DNA (3100 bp), and 51 microsatellite loci.

4 ticulitermes grassei using eight polymorphic microsatellite loci.

5 analyzing the large-scale genomic data from microsatellite loci.

6 reen sea turtles, Chelonia mydas, using four microsatellite loci.

7 ll parishes except one were genotyped for 12 microsatellite loci.

8 l lines, were assayed for polymorphism at 94 microsatellite loci.

9 ence data and variation at seven chloroplast microsatellite loci.

10 vening domain II and compared to 11 unlinked microsatellite loci.

11 ariation at five closely linked dinucleotide microsatellite loci.

12 630 subjects, at 362 autosomal dinucleotide microsatellite loci.

13 terozygosity (LOH) analysis for specific DNA microsatellite loci.

14 y "discontinuous LOH" for one or more of the microsatellite loci.

15 ifferent allelic profiles and frequencies at microsatellite loci.

16 poral changes in allele frequencies at seven microsatellite loci.

17 linkage disequilibrium between CCR5 and two microsatellite loci.

18 ed by tracking length variability in several microsatellite loci.

19 ssful for rapid, semiautomated genotyping of microsatellite loci.

20 t, we identified 119 potentially informative microsatellite loci.

21 ise mutation model, which is appropriate for microsatellite loci.

22 d to mtDNA cytochrome b, intron AM2B1 and 15 microsatellite loci.

23 cross the Mediterranean were genotyped at 14 microsatellite loci.

24 pulations using both chloroplast and nuclear microsatellite loci.

25 eny from these trees were genotyped at eight microsatellite loci.

26 ounced signature on rapidly evolving nuclear microsatellite loci.

27 nelumbiifolia, by genotyping populations at microsatellite loci.

28 data from mitochondrial sequences and eight microsatellite loci.

29 e design of PCR primers flanking polymorphic microsatellite loci.

30 nt structuring of populations based on eight microsatellite loci.

31 The new germplasm also was genotyped for 12 microsatellite loci.

32 ns (Procyon lotor; n=91) and genotyped at 11 microsatellite loci.

33 control group of primers from ten anonymous microsatellite loci.

34 clones containing simple sequence repeat, or microsatellite, loci.

35 The average Wright's FST of microsatellite loci (0.016) was lower than that of alloz

36 half of all loci genotyped (i.e., all eight microsatellite loci, 12 of 16 allozyme loci and 44% of t

37 Nuclear microsatellite loci (2- to 5-bp tandem repeats) would se

38 aches, GenoTan was able to genotype 94.9% of microsatellite loci accurately from simulated data with

39 trosideros polymorpha, for variation at nine microsatellite loci across 23 populations on young Hawai

40 This map consists of 241 microsatellite loci, all previously mapped in the human

41 by the biallelic marker M173 and by the four microsatellite loci alleles into two major subdivisions:

42 rees (n=185) were mapped and genotyped at 12 microsatellite loci, allowing us to positively identify

43 ed mutation rates in selectable genes and at microsatellite loci, although mutations in these genes c

44 have examined differences in diversity at 60 microsatellite loci among human population samples from

45 terns of genomic diversity for ninety feline microsatellite loci among previously characterized popul

46 boon linkage map consists primarily of human microsatellite loci amplified using published human PCR

47 ted in testcrosses, genetic distances at 108 microsatellite loci and 14 sequenced genes are highly va

48 Phylogenetic analysis on 12 microsatellite loci and 1715 combined CDSs from whole-ge

49 dividuals using alleles at eight loci (seven microsatellite loci and a nucleotide substitution in the

50 Using eight microsatellite loci and a variety of analytical methods,

51 cells partially corrects instability at the microsatellite loci and also the substitution and frames

52 es from 18 cancer types at more than 200,000 microsatellite loci and constructed a genomic classifier

53 ularity, the characterisation of polymorphic microsatellite loci and development of suitable markers

54 evolution will require the use of additional microsatellite loci and diallelic genetic markers with l

55 We genotyped 42 lions using 54 microsatellite loci and found that genetic diversity in

56 The microsatellite loci and genetic linkage map will increas

57 notyped adult and seedling Spartina using 17 microsatellite loci and mapped their locations in three

58 This new map includes novel microsatellite loci and markers derived from the 2X geno

59 ared variation at the Clock locus to that at microsatellite loci and mitochondrial DNA (mtDNA).

60 We measured heterozygosity at 14 microsatellite loci and modeled the effects of both mult

61 ata consisted of allele frequencies of eight microsatellite loci and of the Rb(4.12) and Rb(5.10) chr

62 or cross-species amplification of homologous microsatellite loci and studied some of the characterist

63 A total of 707 markers, including 706 microsatellite loci and the morphological marker fruit f

64 We used species-diagnostic mitochondrial and microsatellite loci and the Y chromosome Sry gene to det

65 and Taiwan) were examined using nine nuclear microsatellite loci and three chloroplast microsatellite

66 Using autosomal microsatellite loci and X- and Y-linked diagnostic loci,

67 Genetic differentiation was measured over 10 microsatellite loci and, to determine any effects of sel

68 We evaluated nuclear (microsatellite loci) and mitochondrial diversity across

69 also scored at 57 RAPD-SSCP loci, 5 (TAG)(n) microsatellite loci, and 6 sequence-tagged RAPD loci.

70 istant basins in Chile were genotyped for 13 microsatellite loci, and allocated, through probabilisti

71 distinct chicken breeds was genotyped for 27 microsatellite loci, and individual multilocus genotypes

72 ht rare-event biallelic polymorphisms, seven microsatellite loci, and internal structural analysis of

73 pattern of genetic isolation by distance at microsatellite loci, and it implies that in addition to

74 he O. nubilalis TE has inserted at (GAAA)(n) microsatellite loci, and was named the microsatellite-as

75 of 16 Type I (coding gene) loci, 14 Type II (microsatellite) loci, and 1 endogenous retroviral elemen

76 Microsatellite loci are among the most commonly used mol

77 a situation becoming increasingly common as microsatellite loci are developed in increasing numbers

78 ur data indicate that mutational dynamics at microsatellite loci are more complicated than the genera

79 At present, 11-13 unlinked autosomal microsatellite loci are typed for forensic use.

80 ectable alterations at two or more different microsatellite loci) are significantly more likely to co

81 To examine the utility of conserved microsatellite loci as genetic markers we collated a dat

82 d for caution in the use of repeat counts at microsatellite loci as secure indicators of allelic rela

83 The effective use of microsatellite loci as tools for microevolutionary analy

84 As more microsatellite loci become available for use in genetic

85 in color mutants, were genotyped with twelve microsatellite loci, being eleven of them identified as

86 e comparison of the repeat sizes at multiple microsatellite loci between tumor and matched normal tis

87 e methods rely on the detection of amplified microsatellite loci by fluorescence-based DNA sequencing

88 g role for repeat disruptions in stabilizing microsatellite loci by reducing the substrate for polyme

89 detailed investigation was performed on five microsatellite loci by sequencing each microsatellite, t

90 hat the pattern of variation across unlinked microsatellite loci can be used to test whether populati

91 pair and further support the hypothesis that microsatellite loci can function as molecular tumor cloc

92 s exhibit marked instability at 12 different microsatellite loci composed of repeat units of 1 to 4 b

93 Here, the markedly more variable microsatellite loci confirm the presence of male-mediate

94 We propose that a panel of five microsatellite loci consisting of repeats with different

95 es from pathotype 3 of P. sorghi, 36 flanked microsatellite loci containing simple repeats, including

96 Three microsatellite loci containing trinucleotide or dinucleo

97 that spans this locus and is flanked by the microsatellite loci D13S153 and D13S163 was lost in 85%

98 udes the D18S858 locus and is flanked by the microsatellite loci D18S41 and D18S381, was lost in eigh

99 sides within the genetic interval defined by microsatellite loci D1S2809 and D1S2726.

100 ormal and tumor tissue was analyzed at eight microsatellite loci (D2S119, D2S123, D2S147, D10S197, D1

101 tional 50 esophageal tumors, the polymorphic microsatellite loci D3S1300 and D3S1313 were used to eva

102 potential for using genetic methods based on microsatellite loci data to compare historical trends in

103 ome-wide scan was performed using a panel of microsatellite loci determined to be informative for thi

104 each individual mosquito and genotypes at 21 microsatellite loci determined.

105 That microsatellite loci did not measure greater interpopulat

106 zone, we analyzed chromosomal inversions, 16 microsatellite loci distributed genomewide, and 834 bp o

107 We examined a total of 80 microsatellite loci distributed throughout the mouse gen

108 luated by constructing haplotypes with seven microsatellite loci (DYS388 to 394).

109 epeats of simple sequences indicate that the microsatellite loci evolve via some of forward-backward

110 A total of 10 microsatellite loci exhibited between two and 27 alleles

111 n of neutral genetic differentiation at nine microsatellite loci (F(ST)) as an indicator of expected

112 Nine nuclear microsatellite loci failed to distinguish parental and h

113 We characterized 13 microsatellite loci flanking (+/-99 kb) pfmdr1 in 93 sin

114 of genetic diversity and differentiation at microsatellite loci flanking all 4 genes indicated that

115 utionary history of dhfr alleles, we assayed microsatellite loci flanking dhfr along chromosome 4.

116 associated with sulfadoxine resistance and 5 microsatellite loci flanking dhps in order to investigat

117 doxine-pyrimethamine (SP) resistance and the microsatellite loci flanking these genes were genotyped

118 c variation at the mitochondrial and nuclear microsatellite loci for 148 individuals, we identified t

119 The analyses were based on genotypes at 11 microsatellite loci for 318 individuals, spanning three

120 were genetically characterized by a panel of microsatellite loci for P. falciparum (26) and P. vivax

121 uences, (2) primer design, and (3) screening microsatellite loci for polymorphism.

122 so presented, demonstrating the potential of microsatellite loci for resolving relationships among ac

123 roe deer, we investigated variability at 12 microsatellite loci for Siberian roe deer from ten local

124 re, we used newly-developed and existing DNA microsatellite loci for the brooding coral Porites astre

125 distribution of previous studies to identify microsatellite loci for white-tailed deer (Odocoileus vi

126 ollected and analyzed at cytochrome b and 11 microsatellites loci for investigating genetic variation

127 mapping methods have utilized highly mutable microsatellite loci found within the human genome.

128 30 bp of mitochondrial control region and 12 microsatellite loci from 94 individuals stranded around

129 to the distributions of the allele sizes at microsatellite loci from a set of populations, grouped b

130 l to a dataset of genotypes at 377 autosomal microsatellite loci from human populations indicate high

131 approach to identify inherited variation of microsatellite loci from short sequence reads without pa

132 Herein, we use microsatellite loci from the human pathogen Coccidioides

133 We have analyzed five microsatellite loci from the nonrecombining portion of t

134 of estimating the relative mutation rates of microsatellite loci, grouped by the repeat motif.

135 h intraallelic variability at three intronic microsatellite loci has been examined.

136 of population samples from minisatellite and microsatellite loci has resurrected the interest of the

137 has resulted in the disruption of (GAAA)(n) microsatellite loci, has impacted the application of mic

138 ons and frequencies of five Candida albicans microsatellite loci have been determined for strains iso

139 Microsatellite loci have been used extensively over the

140 al that, on average, the non-disease-causing microsatellite loci have mutation rates inversely relate

141 n structure using genotypes at 377 autosomal microsatellite loci in 1056 individuals from 52 populati

142 rformed an independent genome scan using 751 microsatellite loci in 127 CD-affected relative pairs fr

143 five major histocompatibility loci and three microsatellite loci in 14 populations; the performance o

144 s of heterozygosity (LOH) was analysed in 19 microsatellite loci in 20 grade III invasive transitiona

145 ion of the repeat regions of three noncoding microsatellite loci in 58 species of the Polistinae, a s

146 The method is applied to a data set of 32 microsatellite loci in a Finnish population and the resu

147 typed with more than 350 highly polymorphic microsatellite loci in a genome-wide linkage screen.

148 We examined patterns of variation at 20 microsatellite loci in a sample of 23 natural isolates o

149 ts using modest numbers of loci-e.g. , seven microsatellite loci in an example using genotype data fr

150 Loss of heterozygosity at microsatellite loci in chromosomal band 8p23.2 is a freq

151 Analysis of at least 16 microsatellite loci in each lesion revealed allelic loss

152 Analysis of three data sets from surveys of microsatellite loci in ethnographically defined populati

153 ed fox population expansion, we genotyped 21 microsatellite loci in modern and historical (1835-1941)

154 We measured mutation rates of 24 microsatellite loci in mutation accumulation lines of Dr

155 Identification of polymorphic microsatellite loci in nonhuman primates is useful for v

156 from three nuclear introns, and genotyped 18 microsatellite loci in order to examine the patterns of

157 high frequency of heterozygote deficiency at microsatellite loci in resistant populations, and a nega

158 or helping to interpret genetic variation at microsatellite loci in species with a very recent histor

159 extend this model, a genetic linkage map of microsatellite loci in the feline genome has been constr

160 Application of this measure to data on 18 microsatellite loci in the nine human populations leads

161 d rates of sequence variation at a number of microsatellite loci in the parasite genome, and led to i

162 We were able to genotype over 97% of the microsatellite loci in the targeted regions.

163 variation and that seen at presumed-neutral microsatellite loci in these outbred populations.

164 exchanges, by haplotype analysis of flanking microsatellite loci in tk(-/-) LOH mutants collected fro

165 lteration in the size of at least two of the microsatellite loci in tumor DNA when compared with norm

166 nd class IIalpha MH-linked markers and eight microsatellite loci in two Atlantic salmon populations i

167 At the same time, alterations in 10 microsatellite loci including di-, tri-, and tetranucleo

168 s were detectable by analysis of polymorphic microsatellite loci, including a novel (CA)n locus 7.9 k

169 c analyses of genetic distances based on the microsatellite loci indicate a close genetic relationshi

170 Results from four microsatellite loci indicate high, and informative, vari

171 Genotyping of eight microsatellite loci indicated that the high early mortal

172 lotypes based on six diallelic loci and five microsatellite loci indicates that some Icelandic haplog

173 efined by grouping alleles at closely spaced microsatellite loci into haplotypes, or generated by rep

174 t statistic, ln RV, proposed for identifying microsatellite loci involved in recent selective sweeps.

175 timation of the distance between polymorphic microsatellite loci is also reported.

176 luate constraints on the evolution of single microsatellite loci is described.

177 e at 54 perfect (uninterrupted) dinucleotide microsatellite loci is estimated by direct genotyping of

178 These aphids were genotyped at four microsatellite loci known from previous studies to be hi

179 m that generates high levels of variation at microsatellite loci lags far behind the application of t

180 r sites, strongly influenced by five outlier microsatellite loci located in conserved intergenic regi

181 PCR with primers for 75 highly polymorphic microsatellite loci located on the major autosome arms w

182 rgence, we compared differentiation at eight microsatellite loci (measured as F(ST)) to differentiati

183 trol region (n = 302) and for eleven nuclear microsatellite loci (n = 247).

184 sequences (n = 1327) and nuclear markers (17 microsatellite loci, n = 222) from major wintering groun

185 mposition of African tea based on 23 nuclear microsatellites loci (nSSRs) and three cpDNA intergenic

186 ies were analyzed along with genotypes at 12 microsatellite loci of 40 individuals coexisting in 3 Me

187 We conducted a genetic survey at 10 microsatellite loci of 482 coyotes originating from 11 e

188 satellite loci (D1S80, D17S30, ApoB), and 27 microsatellite loci of di-, tri-, or tetranucleotide rep

189 Using microsatellite loci of known location, we show that this

190 Using genomic data from homologous microsatellite loci of pure AC repeats in humans and chi

191 ty is that there is little or no mutation at microsatellite loci on a non-recombining chromosome such

192 32 contiguous units and assayed at multiple microsatellite loci on chromosome 11q, a region frequent

193 We studied eight microsatellite loci on chromosome 3p regions by multiple

194 ored for loss of heterozygosity (LOH) for 11 microsatellite loci on mouse chromosome 8.

195 informative biallelic markers as well as 10 microsatellite loci on the nonrecombining region of the

196 astic lesions, for genetic alterations at 15 microsatellite loci on the short arm of chromosome 8.

197 th America were surveyed for variation at 16 microsatellite loci on the X, second, and third chromoso

198 with genetic differentiation based on either microsatellite loci or mtDNA sequences.

199 outlier compared with patterns at the other microsatellite loci or neutral expectation.

200 d detection of polymorphic genetic markers - microsatellite loci or simple sequence repeats (SSRs) an

201 stimates depend on the mutation rates at the microsatellite loci, our results support the hypothesis

202 Combining the multi-allelic variation at the microsatellite loci (poly(A) tail and DYS19) with the YA

203 Microsatellite loci presented are the first described fo

204 locations of QTL with the locations of five microsatellite loci previously shown to vary clinally in

205 f normal and tumor genotypes using PCR-based microsatellite loci provides considerable advantages ove

206 Parentage analysis at 32 microsatellite loci provides statistical support for the

207 of 300 individuals were genotyped using five microsatellite loci, representing 100 individuals with a

208 ons of approximately 6000 human dinucleotide microsatellite loci, representing chromosomes 1-22, from

209 ed in the same individuals at five and seven microsatellite loci, respectively.

210 hern Portugal), using two panels of 13 and 8 microsatellite loci, respectively.

211 to be appropriate for classical markers and microsatellite loci, respectively.

212 Analysis of six chloroplast microsatellite loci revealed no variation.

213 notyping of 95% of the trees at nine nuclear microsatellite loci revealed that levels of genetic dive

214 Previous studies using microsatellite loci revealed the complex history of thes

215 This was compared to variation at other microsatellite loci scattered throughout the sheep genom

216 In North America, two of the three microsatellite loci show bimodal distributions of allele

217 Genotype frequencies at eight microsatellite loci showed that current populations desc

218 on/deletion mutation at six repeat-sequence (microsatellite) loci showed each Atmsh2-1 line to have e

219 of heterozygosity (LOH) were performed at 24 microsatellite loci spanning 11q.

220 kage disequilibrium and sequence analyses on microsatellite loci spanning a region of approximately 3

221 A genetic map ordering 1124 microsatellite loci spanning a sex-averaged distance of

222 ture of selection, we survey variation in 26 microsatellite loci spanning an approximately 32-cM regi

223 ensis, from Burkina Faso, West Africa, at 17 microsatellite loci spanning the X chromosome.

224 herefore be used to determine copy number of microsatellite loci spread throughout the human genome.

225 Genetic analyses by polymorphic microsatellite loci suggest that the host population of

226 Multilocus genotypes from 7 microsatellite loci suggested that most populations (10

227 llite alterations in two or more of the five microsatellite loci tested, was not found in NHL.

228 ve two microsatellite alleles at over 1/3 of microsatellite loci tested.

229 the ABI 7700 and based on amplifications of microsatellite loci that contain (CA)n repeats where the

230 and 130 pairs, we found variation at 7 of 21 microsatellite loci that successfully amplified, the rem

231 We analyze variation at 10 Y chromosome microsatellite loci that were typed in 506 males represe

232 Historical studies used only a few microsatellite loci; therefore, our temporal comparisons

233 imens for mutations in K-RAS and analyzed 10 microsatellite loci tightly linked to the tumor suppress

234 Five TNF microsatellite loci (TNFa, TNFb, TNFc, TNFd, and TNFe) w

235 We used 33 microsatellite loci to (1) reconstruct a pedigree for th

236 We applied mtDNA cytochrome b and 11 microsatellite loci to 26 samples (N=1,222) collected ac

237 ong sparrows from 23 populations using seven microsatellite loci to assess genetic differentiation am

238 We used 12 polymorphic microsatellite loci to characterize and compare the colo

239 ar microsatellite loci and three chloroplast microsatellite loci to characterize molecular diversity

240 We used seven microsatellite loci to characterize the genetic structur

241 viduals from 20 populations at four variable microsatellite loci to contrast genetic diversity and st

242 e putative suppressor in 8p23 by using eight microsatellite loci to create a high resolution deletion

243 Here we use a battery of 36 microsatellite loci to document a striking genetic patte

244 minutus) were genotyped at two hypervariable microsatellite loci to document conclusively the number

245 We used six microsatellite loci to examine genetic population struct

246 We used 12 microsatellite loci to genotype 582 individuals from eig

247 We used 12 highly polymorphic microsatellite loci to identify 50 individual jaguars.

248 yped 233 American badgers in Wisconsin at 12 microsatellite loci to identify alternative statistical

249 f these BACs and used them, along with seven microsatellite loci, to detect and map homozygous deleti

250 f heterozygosity (LOH) at multiple PCR-based microsatellite loci using semiautomated fluorescent DNA

251 r the entire African elephants' range for 16 microsatellite loci, using 315 tissue and 84 scat sample

252 Variation at 15 microsatellite loci was characterized for a population o

253 measured by allele length variation at five microsatellite loci was compared with estimates calculat

254 We show here that diversity across eight microsatellite loci was consistently and substantially l

255 ergence in the size of different alleles) at microsatellite loci was examined by sequencing multiple

256 sed on the analysis of size polymorphisms in microsatellite loci was investigated.

257 ll strains, and overall genetic variation at microsatellite loci was low, relative to most other spec

258 Genetic differentiation in microsatellite loci was obvious among the five species.

259 Testing for linkage to microsatellite loci was performed at 20-cM intervals.

260 Polymorphism of microsatellite loci was significantly higher than that o

261 retic separation of PCR amplified oligo A or microsatellite loci was used to identify candidate sampl

262 Paternity analysis based on eight microsatellite loci was used to investigate pollen and s

263 a dataset of 268 individuals genotyped at 19 microsatellite loci, we analyzed genetic structure acros

264 pulation expansion on genetic variability at microsatellite loci, we consider a population that evolv

265 Using nine polymorphic microsatellite loci, we genotyped M. cavernosa colonies

266 Using a panel of 14 microsatellite loci, we quantify the genetic signature o

267 l approaches and genotyping a large panel of microsatellite loci, we show that colony membership, mot

268 Using computer simulations of microsatellite loci, we show that the shape of the distr

269 In the case of genealogical inference using microsatellite loci, we use coalescent simulations to sh

270 hree and six tri- and tetranucleotide repeat microsatellite loci were analyzed in 3720 samples collec

271 In a search for parental relationships, microsatellite loci were analyzed in more than 300 grape

272 Sixty-eight (42%) of 161 charadriiform microsatellite loci were assigned to a single location i

273 on could be generalized, an additional eight microsatellite loci were characterized and sequenced fro

274 Seven microsatellite loci were closely linked with the sex-det

275 In this study diallelic and microsatellite loci were compared for their efficiency i

276 nt knowledge of microsatellite evolution, 20 microsatellite loci were examined for 126 accessions of

277 derived from the donor or recipient, unique microsatellite loci were examined to establish chimeric

278 Slatkin's RST values for microsatellite loci were generally higher than their FST

279 Microsatellite loci were identified in channel catfish g

280 Thirty-nine microsatellite loci were observed in the introns of thes

281 A total of 293 microsatellite loci were polymorphic in one or both fami

282 smission of alleles at FRAXA, FRAXE and four microsatellite loci were recorded for all individuals.

283 Five microsatellite loci were screened across adult and seed

284 The patterns of mutation and evolution at 13 microsatellite loci were studied in the filamentous fung

285 some sections of the genus, yet chloroplast microsatellite loci were too variable to provide any use

286 Microsatellite loci were used as genetic markers, and co

287 Data from eight microsatellite loci were used to determine parentage.

288 Four nuclear microsatellite loci were used to estimate the inbreeding

289 Mitochondrial DNA sequences and microsatellite loci were used to measure genetic diversi

290 ross the United States and China using eight microsatellite loci, which are standard genetic markers

291 or counteracting the continuous expansion of microsatellite loci, which is the logical consequence of

292 ation to 8 positionally mapped gene-anchored microsatellite loci whose positions were known in the ge

293 Genotypic analysis of 10 microsatellite loci widely separated in the parasite gen

294 estigated among British Restharrows using 10 microsatellite loci with 21 Restharrow populations analy

295 Fifty-five primers designed from conserved microsatellite loci with an E-value of E-10 or lower amp

296 al and nuclear nucleotide differences and 20 microsatellite loci with nonoverlapping allele-size rang

297 We assessed the diversity of microsatellite loci within or in close proximity of the

298 We used microsatellite loci within the j inversion on chromosome

299 somal loci (17 introns and 3 exon segments), microsatellite loci, X- and Y-linked zinc-finger protein

300 ding abundant di-, tri-, and tetranucleotide microsatellite loci yielded access to precisely localize