ライフサイエンスコーパス: missing value

1 ture from an expanded dataset to fill-in the missing value.

2 a from valid days and invalid days to impute missing values.

3 ta including normalisation and imputation of missing values.

4 ster analysis when the original data contain missing values.

5 of the data are not available, resulting in missing values.

6 s even where AMDIS deconvolution would leave missing values.

7 s of maximizing the reusability of data with missing values.

8 oteins and peptides as well as imputation of missing values.

9 ion in our study population and 10% or fewer missing values.

10 s, usually contain a considerable portion of missing values.

11 rioritization scores due to the existence of missing values.

12 e FFT analysis due to an excessive number of missing values.

13 ause of the often non-negligible presence of missing values.

14 nes, making it more robust against noise and missing values.

15 icated statistical methods for handling such missing values.

16 orithm becomes more robust against noise and missing values.

17 ing to various reasons, there are frequently missing values.

18 cer and urologic symptoms in a data set with missing values.

19 classification), and a very large amount of missing values.

20 normalizing raw array data and for imputing missing values.

21 , and may lose effectiveness even with a few missing values.

22 unt of missing data over the range of 1--20% missing values.

23 tation methods based on artificially induced missing values.

24 verage, high sensitivity and low between-run missing values.

25 ed preprocessing is applied to eliminate all missing values.

26 s by using statistical techniques to fill in missing values.

27 plete expression measurements with excessive missing values.

28 detection accuracy and the extrapolation of missing values.

29 te a lack of data in the neighborhood of the missing values.

30 icularly when dealing with a large number of missing values.

31 nosis of sepsis while containing significant missing values.

32 imputation model can be used to predict the missing values.

33 type or phenotype with a large proportion of missing values.

34 in data sets that are incomplete or contain missing values.

35 tiple chained imputation was used to address missing values.

36 ng only one imputation algorithm for all the missing values.

37 owed by the implementation of GAIN to impute missing values.

38 sex, tobacco use, etc.) with imputation for missing values.

39 of missing values for 2 or less consecutive missing values.

40 that is otherwise lost due to systematically missing values.

41 baseline and 4 months, using imputation for missing values.

42 , and practice, with multiple imputation for missing values.

43 or caution in indiscriminatory imputation of missing values.

44 e to data sparsity, high dimensionality, and missing values.

45 ssing data from the analysis; (2) impute the missing values.

46 mples after introducing increasing levels of missing values.

47 at leverages a two-step approach in imputing missing values.

48 this system is very robust against noise and missing values.

49 ularly suitable for datasets containing many missing values.

50 terized by low sample numbers with noisy and missing values.

51 , which are inherently noisy and suffer from missing values.

52 ence of baseline variables with nonignorable missing values.

53 mass index and glycosylated hemoglobin have missing values.

54 V approach that excludes IV-confounders with missing values.

55 single-cell DNA methylation data and impute missing values.

56 data patterns where multiple variables have missing values.

57 There were 0.8% cases with missing values.

58 We also design a method for reducing missing values.

59 sion analysis using multiple imputations for missing values.

60 ; 2 missing values] vs 966 of 1630 [59.3%; 1 missing value]).

61 in the 24-week analysis, with imputation of missing values; 176 patients (97%) remained in the trial

62 In dealing with missing values, 2 approaches were used (eliminating and

63 data are collected and processed may lead to missing values; (3) missing values can be introduced ran

64 cts who reported diabetes at baseline or had missing values, 93,860 cohort members were part of this

65 nomic position information, a maximum of 10% missing values, a minimum minor allele frequency of 5%,

66 experimental designs-all with essentially no missing values across the 16 samples and no loss in quan

67 ds for the analysis of this data that impute missing values, address sampling issues and quantify and

68 We also demonstrate that missing values affect significance analysis.

69 ains procedures to filter, normalize, impute missing value, aggregate peptide intensities, perform nu

70 t provides several advantages, such as fewer missing values among samples and higher quantitative pre

71 30 children were excluded because of missing values and 92 were excluded because of measureme

72 this work, we report a study on the scope of missing values and a robust method of filling the missin

73 missing values: (i) eliminate or impute the missing values and apply statistical methods that requir

74 om 30 660 participants after adjustments for missing values and class imbalances (15 330 with ASD and

75 variate two-part statistics that accommodate missing values and combine data from all biospecimens to

76 this uncertainty, we evaluated the impact of missing values and feature imputation methods on two pre

77 ation is a common technique for dealing with missing values and is mostly applied in regression setti

78 Secondly, to address missing values and noise in the data, preprocessing meth

79 tab has improved performance in imputing the missing values and performing statistical inference comp

80 hat good imputation alleviates the impact of missing values and should be an integral part of microar

81 interviews with mothers, with imputation of missing values and survival analysis.

82 putation task, the input comprises logs with missing values and the output is the corresponding imput

83 In this work we examine how missing values and their imputation affect significance

84 rol, such as the need of separately handling missing values and truly absent data to avoid losing rel

85 m analysis provides a direct method to treat missing values and unevenly spaced time points.

86 ty of video-based diagnostics in the face of missing values and variable video quality.

87 pairings, and handles both degraded samples (missing values) and experimental errors in producing and

88 er, to predict the conditional mean for each missing value, and we also incorporate a local kernel-ba

89 nderstanding the impact of design imbalance, missing values, and aggressive correction.

90 tures based on blank samples, proportions of missing values, and estimated intra-class correlation co

91 Typically, such data is noisy, contains missing values, and has only few time points and biologi

92 tric data typically contain large amounts of missing values, and imputation is often used to create c

93 en corrupted with extreme values (outliers), missing values, and non-normal distributions that preclu

94 were conducted: accuracy in reproducing the missing values, and predictive performance using the imp

95 e predictors, performed median imputation of missing values, and resolved multicollinearity issues.

96 m the main models because of high numbers of missing values, and the models were not externally valid

97 context of clustering is to first impute the missing values, and then apply the clustering algorithm

98 ms to simultaneously select probes and input missing values, and we demonstrate that these 'probe sel

99 The missing values are '-0.24' and '-0.64', respectively.

100 Missing values are a major issue in quantitative data-de

101 Missing values are a major issue in quantitative proteom

102 Missing values are common in high-throughput mass spectr

103 However, missing values are common in MS data and imputation can

104 Missing values are commonly observed in metabolomics dat

105 rence compared to other current methods when missing values are due to a mixture of MNAR and MAR.

106 Most of the missing values are found to be low abundance peak pairs.

107 Second, missing values are imputed FW-CAGIN, a novel class-aware

108 iments, only the subset is measured, and the missing values are inputed.

109 a mix of full records and records with some missing values (area under the receiver operating curve

110 ons between genes, especially when there are missing values arising for experimental reasons.

111 LLSimpute) represents a target gene that has missing values as a linear combination of similar genes.

112 plicing quantification, and is able to model missing values as additional signals.

113 AMELIA outperformed MICE in handling missing values, as MICE tended to overestimate certain v

114 of rare variants, and a large proportion of missing values, as well as the fact that most current an

115 imed to develop an algorithm to estimate the missing values at sampled time points in the analyte res

116 BayesMetab, that systematically accounts for missing values based on a Markov chain Monte Carlo (MCMC

117 Batch effect associated missing values (BEAMs) are batch-wide missingness induce

118 od, the so-called PC-algorithm, to deal with missing values by multiple imputation, with mixed discre

119 nd processed may lead to missing values; (3) missing values can be introduced randomly.

120 Missing values can complicate the application of cluster

121 Because missing values can have a profound influence on metabolo

122 Switching regression was employed to impute missing values combined with a bootstrapping approach fo

123 Nemar's 2 x 2 tables with four scenarios for missing values: completely-at-random, case-dependent, ex

124 ts a predictive model for each variable with missing values, conditional on other variables in the da

125 tasets and one metabolomics dataset indicate missing values could be a mixture of abundance-dependent

126 Data preprocessing included handling missing values, demographic standardization, and validit

127 Two datasets, different amounts of missing values, different imputation methods, the standa

128 erforms overall best; it is most tolerant to missing values, displays good reproducibility and is the

129 pression matrix frequently contains numerous missing values due to measurement limitations.

130 multi-omics datasets inevitably suffer from missing values due to technical limitations and various

131 ds are compared on both simulated and masked missing values embedded within real proteomics datasets,

132 sion models and imputation methods addressed missing values, ensuring accurate and robust results.

133 0 copies/mL (intent-to-treat analysis, where missing values equal > or =500 copies/mL) and CD4 cell c

134 Effective missing value estimation methods are needed since many a

135 n compared with other imputation methods for missing value estimation on various datasets and percent

136 ovide a more robust and sensitive method for missing value estimation than SVDimpute, and both SVDimp

137 This study compares methods of missing value estimation.

138 Non-parametric missing values estimation method of LLSimpute are design

139 Several methods of missing-value estimation are in use.

140 oise-ratio, replicate filter, sample filter, missing value filter, and RSD filter were all optimized;

141 orithm was developed to handle any number of missing values for 2 or less consecutive missing values.

142 tion was developed to automatically simulate missing values for an uploaded MMTT data set.

143 h coronary heart disease, stroke, cancer, or missing values for body-mass index were excluded.

144 MICE imputation allowed us to impute missing values for clinically informative features, impr

145 ses, which were recently improved to address missing values for cooked foods and to adjust for flavon

146 data series (excluding 274 847 children with missing values for diarrhea or baseline characteristics)

147 hether for reconstructing the past, imputing missing values for further analysis, or understanding ev

148 was also included for comparison by imputing missing values for patients without a dominant pulmonary

149 , and 3) instances of testing data that have missing values for some attributes.

150 luence on metabolomic results, the extent of missing values found in a metabolomic data set should be

151 Missing values frequently arise in modern biomedical stu

152 was designed to: 1) combine the estimates of missing value from individual omics data itself as well

153 Results demonstrated that simulated missing values from one dataset could be accurately impu

154 ng a hierarchical bayesian model, we imputed missing values from sources not providing data.

155 R and Bioconductor, and an option to exclude missing values from the analysis.

156 learning is increasingly used to impute the missing values from the available data.

157 ss spectrometry experiments by inferring the missing values from the available measurements, without

158 s, including a novel method, used to capture missing values from the literature.

159 ted stages of the computation, and recompute missing values from these checkpoints on an as-needed ba

160 Multiple imputation for missing values gave similar results: the mean baseline w

161 ata that bayNorm allows robust imputation of missing values generating realistic transcript distribut

162 ing pregnancy, and delivery type) and 1 with missing values (her rhesus factor), while incorporating

163 Gene expression data frequently contain missing values, however, most down-stream analyses for m

164 Two strategies are available to address missing values: (i) eliminate or impute the missing valu

165 This study investigates how BEAMs impact missing value imputation (MVI) and batch effect (BE) cor

166 n matrix construction, matrix normalization, missing value imputation (MVI), and differential express

167 Numerous Missing Value Imputation Algorithms (MVIAs) employ heuri

168 We compare various machine learning and missing value imputation algorithms to implement LEXI an

169 nTE features selected normalization methods, missing value imputation algorithms, peptide-to-protein

170 When missing value imputation and gene prioritization are seq

171 ing strategy-convex analysis of mixtures-for missing value imputation and present preliminary experim

172 We show that specialized techniques for missing value imputation can improve the performance of

173 on package designed for efficient and robust missing value imputation for EHRs.

174 detecting molecular regions and region-based Missing value Imputation for Spatially Transcriptomics (

175 improved performance of GAN-based models for missing value imputation in a multivariate time series d

176 Our proposed missing value imputation is more accurate than conventio

177 at the suggested rank tuning method based on missing value imputation is theoretically superior to ex

178 Therefore, a Missing Value Imputation process is necessary for traini

179 integration bound detection, and intelligent missing value imputation steps to the conventional infor

180 igorous data preprocessing workflow included missing value imputation, correlation checks, and expert

181 most fundamental and interrelated tasks are missing value imputation, signature gene detection, and

182 ith the traditional non-ensemble approach to missing value imputation.

183 on, cancer-specific survival prediction, and missing value imputation.

184 rift, integration region variance, and naive missing value imputation.

185 We focused on the following issues after missing value imputation: (i) concordance of gene priori

186 sing value methods offered by 23 widely used missing-value imputation algorithms.

187 ing, we demonstrate the biological impact of missing-value imputation on statistical downstream analy

188 e of urine samples negative for any opioids (missing values imputed as positive), percentage of urine

189 yses were done on the full analysis set with missing values imputed by last observation carried forwa

190 Genotypes with missing values imputed with methods that make use of gen

191 ), magnetic resonance imaging lesion burden (missing values imputed), and country.

192 D.org , is developed to automatically find a missing value in the CSV file and go back to the raw LC-

193 r to classify the missing mechanism for each missing value in the data set.

194 ng values and a robust method of filling the missing values in a chemical isotope labeling (CIL) LC-M

195 e data set as a way of gauging the extent of missing values in a metabolomics platform.

196 propose a standardized approach of counting missing values in a replicate data set as a way of gaugi

197 for larger-scale MS studies is data gaps or missing values in aligned data sets.

198 atients included in 1 RCT, the management of missing values in another RCT, and discrepant timing for

199 pInfeR, including e.g. the ability to handle missing values in both protein-drug affinity and drug se

200 n large-scale learning problems with massive missing values in comparison to Naive Bayes.

201 They apply the approach to impute missing values in data on adverse birth outcomes with mo

202 It allows missing values in experimental data and utilizes multi-c

203 udy of several methods for the estimation of missing values in gene microarray data.

204 A computational approach to recover missing values in metabolomics and proteomics datasets i

205 Missing values in numerical features were imputed using

206 A common practice for dealing with missing values in the context of clustering is to first

207 ers, and variational autoencoders can impute missing values in the context of LFQ at different levels

208 We consider missing values in the context of optimal clustering, whi

209 ation on various datasets and percentages of missing values in the data.

210 mputation techniques are also used to handle missing values in the dataset to get valid inferences fo

211 iple imputation was performed to account for missing values in the dataset.

212 squares formulation are proposed to estimate missing values in the gene expression data, which exploi

213 y analyses that used multiple imputation for missing values in the overall cohort of 1572 patients.

214 to simply drop those records with 1 or more missing values, in so-called "complete records" or "comp

215 rests emerged as a robust strategy to impute missing values, increasing model concordance by 0.0030 (

216 Estimating these missing values is important because they affect downstre

217 thods have been established to deal with the missing-value issue.

218 icularly when time dependent markers contain missing values, leading to biased estimates.

219 he data are homogeneous or if there are many missing values, LinCmb puts more weight on global imputa

220 e data are heterogeneous or if there are few missing values, LinCmb puts more weight on local imputat

221 ) with 26 participants lost to follow-up and missing values managed by multiple imputation.

222 nalysis, and not including observations with missing values may lead to bias.

223 ention to treat with multiple imputation for missing values (mean between-group difference, 0.01 mL/k

224 k of optimal clustering by incorporating the missing value mechanism into the random labeled point pr

225 e implementation and evaluation of different missing value methods offered by 23 widely used missing-

226 To account for missing values, multiple imputations were performed.

227 Missing values (MVs) are pervasive, yet the treatment of

228 rray experiments frequently produce multiple missing values (MVs) due to flaws such as dust, scratche

229 The presence of missing values (MVs) in label-free quantitative proteomi

230 However, missing values (MVs) in metabolomics datasets are common

231 We demonstrate that NMF can handle missing values naturally and this property leads to a no

232 mporting data, annotating datasets, tracking missing values, normalizing data, clustering and visuali

233 amples negative for fentanyl or norfentanyl (missing values not imputed), and scores on opiate withdr

234 erved values included, without replacing the missing values (observed-cases analysis).

235 Optimal clustering with missing values obviates the need for imputation-based pr

236 ere analysed with and without imputation for missing values of anti-JCV antibody status and previous

237 Chained equations were used to impute missing values of covariates.

238 es of using regularized regression to impute missing values of high-dimensional data that can handle

239 d a multiple imputation procedure to fill in missing values of levels determined to be below the dete

240 Missing values of primary outcome variables were conside

241 al practice, partly due to heterogeneity and missing values of the cohorts.

242 lly has improved performance in imputing the missing values of the different datasets compared to KNN

243 The following modeling stages were used: (1) missing values of the satellite-based aerosol optical de

244 We imputed missing values on anti-JCV antibody status (3912 patient

245 Approximately 23 795 (~6%) had missing values on at least 1 of the variables of interes

246 the effect of sample size and percentage of missing values on statistical inference for multiple met

247 mpact of applying other strategies to impute missing values on the prognostic accuracy of downstream

248 data mechanism, and use this model to impute missing values or obtain direct estimates of model param

249 ncorporates strategies such as imputation of missing values, outlier rejection, feature selection usi

250 Even in cases of missing values predictability was reliable.

251 s thus a great need to reliably impute these missing values prior to the statistical analyses.

252 de an effort to partially compensate for the missing value problem, a chronic issue for proteomics st

253 We show how the missing-value problem fits neatly into the overall frame

254 point process and then marginalizing out the missing-value process.

255 The missing value rate for the primary outcome was 0.4% (one

256 ucted with a low relative error even at high missing value rates (>50 %), and that such predicted dat

257 are affected by moderate false negative and missing value rates.

258 eins and generates data that is plagued with missing values, requiring extensive imputation.

259 Under the case/exposure-dependent missing-value scenario, neither method performed satisfa

260 ar to nominal coverage under the first three missing-value scenarios, whereas the missing-indicator m

261 o and the presence of an excessive number of missing values, scRNA-seq data analysis encounters uniqu

262 Imputing missing values separately for each variable was computat

263 These missing values severely hinder integrative analysis of m

264 We treat the multivariate liabilities as missing values so that an expectation-maximization (EM)

265 analyses on complete observations and other missing value strategies in biomarker prediction of dise

266 Selecting an optimal strategy to impute missing values such as random forests and applying multi

267 chnologies that provide a high proportion of missing values, such as GBS, should be handled carefully

268 y analysis using multiple imputation (MI) of missing values supported these findings.

269 tivity analysis using multiple imputation of missing values supported these findings.

270 Rather than replacing missing values, SynSurr jointly analyzes the original an

271 The regularized t-test is less affected by missing values than the standard t-test.

272 While less prone to missing values, these still exist.

273 s representation of all variables (including missing values) to an ordinal, dynamic prediction of the

274 tion or great variability in the handling of missing values, use of imputation, and accounting for co

275 Second, we impute each missing value using imputation algorithms that are speci

276 First, the proposed LRWGKLNN model handles missing values using a linear regression method.

277 many methods have been proposed to estimate missing values via information of the correlation patter

278 ants were nulliparous (944 of 1624 [58.1%; 2 missing values] vs 966 of 1630 [59.3%; 1 missing value])

279 ng medications, triglycerides >400 mg/dl, or missing values, we evaluated associations of HDL-C and n

280 After imputing missing values, we fitted alternative generalised linear

281 After multiple imputation of missing values, we used counterfactual mediation models

282 These missing values were imputed from other characteristics.

283 Missing values were not imputed, assuming that any missi

284 ance of the proposed optimal clustering with missing values when compared to various clustering appro

285 eneralizes well even when some features have missing values, when the training and testing datasets d

286 tends to produce false positives and leaves missing values where peaks are found in only a proportio

287 is that the data matrix frequently contains missing values, which complicates some quantitative anal

288 ost datasets suffer from partial or complete missing values, which has downstream limitations on the

289 a large fraction, in the range of 58-85% of missing values, which makes it challenging to apply mach

290 cs experiments frequently generate data with missing values, which may profoundly affect downstream a

291 tes its effectiveness in accurately imputing missing values while preserving the integrity of cell cl

292 de more frequent than the observation times, missing values will arise.

293 twork to model data distributions and impute missing values with greater precision than conventional

294 ler imputation methods based on substituting missing values with the metabolite mean, zero values, or

295 used row average method (as well as filling missing values with zeros).

296 ausing missingness and inaccurately estimate missing values within a data set.

297 ges in multi-modal data analysis by handling missing values within the model, enabling the integratio

298 the same set of subjects, and easily handle missing values without any imputation.

299 nhanced quantification of proteins with many missing values without having to resort to harmful assum

300 stical methods that specifically account for missing values without imputation (imputation-free metho