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1 anisms that degrade the partially translated nascent polypeptide.
2 al sequence by SecYEG, and elongation of the nascent polypeptide.
3 sponds by degrading both the message and the nascent polypeptide.
4 is facilitated by direct ATP binding to the nascent polypeptide.
5 n tmRNA-mediated SsrA-peptide tagging of the nascent polypeptide.
6 of eRF1 and eRF3 in ensuring fast release of nascent polypeptide.
7 ition of a C-terminal degradation tag to the nascent polypeptide.
8 d to the NH2-terminal glycine residue of the nascent polypeptide.
9 tidyl-tRNA bond and release of the completed nascent polypeptide.
10 RF2) from the ribosome after release of the nascent polypeptide.
11 me and adds its aminoacylated alanine to the nascent polypeptide.
12 l that would facilitate the recruitment of a nascent polypeptide.
13 as assayed by tmRNA-mediated tagging of the nascent polypeptide.
14 sequence determinants encoded throughout the nascent polypeptide.
15 (SAD) domain in the carboxy terminus of the nascent polypeptide.
16 codons) may be more biased than the complete nascent polypeptide.
17 tailing enables robust ubiquitination of the nascent polypeptide.
18 e ribosome translates a messenger RNA into a nascent polypeptide.
19 osome activity to structure acquisition by a nascent polypeptide.
20 of Srp1 and Sts1 in degradation of misfolded nascent polypeptides.
21 ore slowly translated, and aggregation-prone nascent polypeptides.
22 osomes, assisting the maturation of emerging nascent polypeptides.
23 ding and post-translational modifications of nascent polypeptides.
24 and prevents misfolding of newly synthesized nascent polypeptides.
25 lly characterized for its role in processing nascent polypeptides.
26 the context of the tag added at the ends of nascent polypeptides.
27 t lacked the ability to add formyl groups to nascent polypeptides.
28 e formation of the Gbetagamma dimer from its nascent polypeptides.
29 ce regulator (CFTR) have distinct effects on nascent polypeptides.
30 rmyl group from the N-terminal methionine of nascent polypeptides.
31 , resulting in N-terminal formylation of all nascent polypeptides.
32 (3)Man(9)GlcNAc(2) to asparagine residues on nascent polypeptides.
33 lecular chaperones to interact directly with nascent polypeptides.
34 charides onto certain asparagine residues of nascent polypeptides.
35 ational processes that determine the fate of nascent polypeptides.
36 rolyl isomerase activity and associates with nascent polypeptides.
37 bstituted for C-terminal signal sequences in nascent polypeptides.
38 und to be the predominant chaperone bound to nascent polypeptides.
39 tes within domain-encoding regions of select nascent polypeptides.
40 downstream pathways that dictate the fate of nascent polypeptides.
41 s with the ribosome to assist the folding of nascent polypeptides.
42 cetylates the N termini of a wide variety of nascent polypeptides.
43 in-biogenesis factors that guide the fate of nascent polypeptides.
44 h glycosylation of acceptor sites (NXT/S) in nascent polypeptides.
45 rate to couple proteasomes to ribosome-bound nascent polypeptides.
47 riminately arresting the elongation of every nascent polypeptide after the synthesis of six to eight
48 e affects the early processing events of the nascent polypeptide, altering the efficiency of ER inser
52 hdrawal, enhanced the expression of arrested nascent polypeptides and caused constitutive protein fol
53 eins while avoiding the misidentification of nascent polypeptides and correctly folded proteins is li
55 Protein chaperones promote native folding of nascent polypeptides and refolding of misfolded species,
56 racterize tertiary structural transitions of nascent polypeptides and show that the first nucleotide-
57 of co-translationally active chaperones with nascent polypeptides and the resulting effects on peptid
58 events is tuned by intrinsic features of the nascent polypeptides and timely association of factors w
59 ndoplasmic reticulum (ER) to fold and modify nascent polypeptides and to synthesize phospholipids for
61 NA enters stalled ribosomes, adds Ala to the nascent polypeptide, and serves as a template to encode
62 ribosome rescue, degradation of the stalled nascent polypeptide, and targeting of the mRNA for decay
63 and identified mitotic regulators, misfolded nascent polypeptides, and pathological Huntingtin varian
64 ccomplished, we probe the mechanism by which nascent polypeptides are accurately sorted between the m
66 plasmic reticulum (ER) channel through which nascent polypeptides are imported and from which malfold
67 ational translocation and N-glycosylation of nascent polypeptides are mediated by a ternary supramole
68 s are split into subunits and the 60S-housed nascent polypeptides are poly-ubiquitinated by Listerin.
69 le quality control mechanisms to ensure that nascent polypeptides are properly folded and mature prot
70 complex, whereas the corresponding aberrant nascent polypeptides are ubiquitinated by the E3 ligases
71 template, the translation machinery, or the nascent polypeptide arrest the ribosome during translati
72 le for co-translational glycosylation of the nascent polypeptide as it enters the lumen of the endopl
73 ble for cotranslational glycosylation of the nascent polypeptide as it enters the lumen of the endopl
74 identify the Schizosaccharomyces pombe (Sp) nascent polypeptide associated complex (NAC) as a potent
75 tor (SR) are required for targeting, and the nascent polypeptide associated complex (NAC) prevents in
79 he signal recognition particle (SRP) and the nascent polypeptide-associated complex (NAC) are release
84 ing the role of a cotranslational chaperone, nascent polypeptide-associated complex (NAC), in regulat
85 he signal recognition particle (SRP) and the nascent polypeptide-associated complex (NAC), respective
87 y spliced isoform of naca, which encodes the nascent polypeptide-associated complex alpha polypeptide
88 ve haematopoiesis due to a deficiency in the nascent polypeptide-associated complex alpha subunit (NA
89 of two genes encoding an archaeal homolog of nascent polypeptide-associated complex alpha subunit and
91 rgeting, it has therefore been proposed that nascent polypeptide-associated complex functions as a cy
94 alternative signal peptidase cleavage of the nascent polypeptide at a primary site (Cys(-)(1)-Asn(1))
96 Akt, mTORC2 mediates phosphorylation of the nascent polypeptide at the turn motif (TM) site, Thr450,
97 twork of machineries that transiently engage nascent polypeptides at distinct phases of translation.
98 ing processes facilitates quality control of nascent polypeptides at each stage of their maturation.
100 ard-to-see protein subpopulations, including nascent polypeptides being translated and post-translati
101 n (CTU) is a robust process, with 12%-15% of nascent polypeptides being ubiquitinated in human cells.
103 the basis of their ability to coprecipitate nascent polypeptides, both before and after chemical cro
104 cond core RQC component, Rqc2p, modifies the nascent polypeptide by adding a carboxyl-terminal alanin
105 properties of the C-terminal residues of the nascent polypeptide can affect the rate of translation t
106 provide a specialized scaffold against which nascent polypeptides can begin to form structure in a hi
109 hored proteins requires translocation of the nascent polypeptide chain across the endoplasmic reticul
114 biosynthesis on the ribosome, an elongating nascent polypeptide chain can begin to fold, in a proces
115 , presumably the exit site through which the nascent polypeptide chain emerges from the ribosome.
118 folding constrains the conformations of the nascent polypeptide chain in a manner not experienced by
121 e (LLO) donor to the asparagine residue of a nascent polypeptide chain is catalyzed by an oligosaccha
123 s indicate that tunnel interactions with the nascent polypeptide chain might be relevant for the regu
124 ribosomal slip site generates a force on the nascent polypeptide chain that scales with observed fram
133 the intrinsic dynamic properties of emerging nascent polypeptide chains and guides them toward their
134 n Rmt2 substrates is likely to take place on nascent polypeptide chains and that these substrates exi
135 trigger factor (TF) interacts directly with nascent polypeptide chains as they emerge from the ribos
136 ecruits the multifunctional soluble Hsc70 to nascent polypeptide chains as they exit the ribosome.
137 ar membranes, and ensuring proper folding of nascent polypeptide chains during protein translation.
138 cells, including cotranslational folding of nascent polypeptide chains during their synthesis by the
140 longation pausing, roughly at the site where nascent polypeptide chains emerge from the ribosomal exi
141 y the signal recognition particle (SRP) when nascent polypeptide chains emerge from the ribosome.
142 bably the first cytosolic protein to contact nascent polypeptide chains emerging from ribosomes.
144 itylation and extraction of ribosome-stalled nascent polypeptide chains for proteasomal degradation.
145 s certain aberrant, translationally arrested nascent polypeptide chains for proteasomal degradation.
146 nhance de novo protein folding by protecting nascent polypeptide chains from misfolding and maintain
149 hat both subunits are in direct contact with nascent polypeptide chains on the ribosome and that both
151 l strategies that would allow domains within nascent polypeptide chains to modulate gene expression.
152 ponent of the chaperone machinery that binds nascent polypeptide chains upon their exit from the ribo
153 ween the active site of the STT3 protein and nascent polypeptide chains using an in vitro photocrossl
154 e transfected into C2C12 cells, and sites of nascent polypeptide chains were detected using the biars
155 g strategies to label endogenously occurring nascent polypeptide chains within cells using O-propargy
158 plasmic Hsp70 that binds ribosome-associated nascent polypeptide chains, also binds to the TPR domain
159 ce puromycin is covalently incorporated into nascent polypeptide chains, anti-puromycin immunofluores
160 ates, allowing for more efficient folding of nascent polypeptide chains, down-regulation of the UPR,
162 f thioether (lanthionine) cross-links within nascent polypeptide chains, yielding macrocyclic protein
174 on of the individual mRNA, ribosomal, and/or nascent polypeptide components, thereby clearing the cel
175 ted to signal cotranslational degradation of nascent polypeptides, cotranslational ubiquitylation occ
176 puromycin, which purges translocon pores of nascent polypeptides, creating additional empty pores.
177 ar how the changing information in a growing nascent polypeptide dictates the recruitment of function
179 slational transfer of high-mannose sugars to nascent polypeptides during N-linked glycosylation in th
180 cular chaperones interact with and stabilize nascent polypeptides during synthesis and/or translocati
181 through capture onto a solid surface of the nascent polypeptides during translation of synthetic or
182 essential in all cells and initiates when a nascent polypeptide emerges from the ribosome exit tunne
191 he peptidyl transferase center (PTC) and the nascent polypeptide exit tunnel (NPET), and export of as
192 the mRNA channel, the tRNA passage, and the nascent polypeptide exit tunnel contain Lmr-specific pro
193 cA was found to also bind ribosomes near the nascent polypeptide exit tunnel, but the function of thi
198 nt conformational changes in MRP mL45 at the nascent polypeptide-exit site within the large mitoribos
199 y, molecular chaperones have evolved to help nascent polypeptides fold correctly and multimeric prote
200 Hsp70 family, Ssb, previously implicated in nascent polypeptide folding and protein turnover, exhibi
203 st that TF has a unique ability to sequester nascent polypeptides for a relatively prolonged period.
205 ts uncover two separate pathways that target nascent polypeptides for Ltn1-Cdc48-mediated degradation
209 reatment with puromycin (0.1-1 mm) to remove nascent polypeptides from ribosomes increases Ca(2+) lea
211 is achieved through a tiered system wherein nascent polypeptides have a chance to fold before becomi
213 itment, tRNA interaction, and exiting of the nascent polypeptide in Lmr must differ markedly from the
216 lity control (RQC) purges aberrant mRNAs and nascent polypeptides in a multi-step molecular process i
219 the anti-puromycin staining of puromycylated nascent polypeptides in fixed cells accurately reports o
220 biochemical assays and live cell imaging of nascent polypeptides in mammalian cells, that puromycyla
221 ed the direct interaction of chaperones with nascent polypeptides in the cytosol of mammalian cells b
222 llowed by the transfer of the core glycan to nascent polypeptides in the endoplasmic reticulum (ER).
223 lyzes the cotranslational N-glycosylation of nascent polypeptides in the endoplasmic reticulum in all
224 in cytoplasmic loops caused retention of the nascent polypeptides in the endoplasmic reticulum, all t
225 of dolichol-linked oligosaccharide chains to nascent polypeptides in the endoplasmic reticulum, consi
226 yme that catalyzes N-linked glycosylation of nascent polypeptides in the lumen of the endoplasmic ret
228 Glc(3), 1a) to an asparagine side chain of a nascent polypeptide inside the lumen of the endoplasmic
229 ng of transmembrane domains begins after the nascent polypeptide integrates into the lipid bilayer or
232 ng UAG at these two positions may divert the nascent polypeptide into an alternative folding pathway
234 is essential for productive insertion of the nascent polypeptide into the translocation site, channel
235 ins may play a critical role in transforming nascent polypeptides into 3-dimensional configurations t
236 sp70s, which assist in the proper folding of nascent polypeptides into higher ordered structures.
238 n topology by cotranslationally partitioning nascent polypeptides into the cytosol, ER lumen, and lip
239 nel that translocates signal peptide-bearing nascent polypeptides into the endoplasmic reticulum (ER)
240 global protein synthesis, lowering influx of nascent polypeptides into the stressed ER, coincident wi
241 that sequestration of misfolded proteins and nascent polypeptides into two distinct compartments, str
243 rmylated methionine, the formyl group of the nascent polypeptide is removed by peptide deformylase.
244 o-translationally when the N-terminus of the nascent polypeptide is still attached to the ribosome.
245 , and EF-TucGTP binds stalled ribosomes, the nascent polypeptide is transferred to the alanine on tmR
246 eria) that recognizes the signal sequence of nascent polypeptides is a GTPase, as is the SR-alpha sub
247 inefficient, and a substantial proportion of nascent polypeptides is rejected by an ER quality contro
248 t ribosome-translocon junction; synthesis of nascent polypeptides lacking a signal sequence resulted
251 ane-derived complexes, we determined how the nascent polypeptide modulates translocon component assoc
252 hese results indicate that ubiquitination of nascent polypeptides occurs in two contexts and define C
253 initiator Met in good Kozak context, a large nascent polypeptide of 3576 amino acids is predicted, in
255 tides in mammalian cells, that puromycylated nascent polypeptides rapidly dissociate from ribosomes e
258 eam of the RodZ transmembrane domain dictate nascent polypeptide selection by SecA instead of the SRP
260 ultivalent fluorescence amplification of the nascent polypeptide signal, we develop a method to image
263 res composed of a dense core inaccessible to nascent polypeptides surrounded by a surface that stably
265 showed that while the hybrid tmRNA supported nascent polypeptide tagging and ribosome rescue, it suff
266 control (RQC) pathway for the degradation of nascent polypeptides that are encoded by defective messe
267 ) transfers high mannose-type glycans to the nascent polypeptides that are translated by the membrane
268 ds to 60S ribosomal subunits to ubiquitylate nascent polypeptides that become stalled during synthesi
270 alyses demonstrated that translocon-targeted nascent polypeptides that subsequently stall are polyubi
271 th rates and defects in the translocation of nascent polypeptides that use the cotranslational transl
272 erplay between biophysical properties of the nascent polypeptide, the vectorial nature and rate of tr
273 of elongating mitoribosomes bound to tRNAs, nascent polypeptides, the guanosine triphosphatase elong
274 ed by the post-translational modification of nascent polypeptides, the use of modified ribosomes to p
277 in biogenesis factors (RPBs) compete for the nascent polypeptide to influence their localization, fol
278 tein and the envelope protein E1 targets the nascent polypeptide to the endoplasmic reticulum (ER) me
280 d environment where numerous factors contact nascent polypeptides to influence their folding, localiz
282 omes stalled on truncated mRNAs and tags the nascent polypeptides to target them for proteolysis.
283 t signal peptides act primarily in targeting nascent polypeptides to the endoplasmic reticulum, we su
285 challenged to efficiently and properly fold nascent polypeptides, traffic them to their appropriate
286 ing translation are split into subunits, and nascent polypeptides trapped in the 60S subunit are ubiq
287 the early stage of a protein's life, as the nascent polypeptide traverses and emerges from the ribos
288 ar basis of how hydrophobic signals within a nascent polypeptide trigger channel opening is not under
290 uggests that the E3 ligase listerin accesses nascent polypeptides via a gap in the ribosome-transloco
291 ing ribosome docking on the ER membrane, the nascent polypeptide was shielded from the cytosol as it
292 tagged with biotin or BODIPY; although most nascent polypeptides were cytoplasmic, some were found i
293 iggers release of 60S subunits with attached nascent polypeptides, which undergo ubiquitination by th
295 oration of the coumarin derivative generated nascent polypeptides with a hydrophobic residue at their
296 to tag and capture a population of truncated nascent polypeptides with no bias as to the identity of
298 hat the cargo for SRP--ribosomes translating nascent polypeptides with signal sequences--accelerates
299 rimary and likely secondary structure of the nascent polypeptide within the ribosome exit tunnel can
300 eta cells beyond the capacity for folding of nascent polypeptides within the endoplasmic reticulum (E