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1 n trees, linear discriminate analysis, and k-nearest neighbor).
2 Forest, Naive Bayes, Logistic Regression, K-Nearest Neighbor.
3 ion, whose sign depends on the number of its nearest neighbors.
4 trations, size hierarchies and the growth of nearest neighbors.
5 inished by merging small clusters into their nearest neighbors.
6 les, and small modules are merged into their nearest neighbors.
7 ctive behavior is achieved by following only nearest neighbors.
8 t exclusively involve properties of a node's nearest neighbors.
9 s containing P*U pairs adjacent to different nearest neighbors.
10 Groups were propensity matched using a 2:1 nearest neighbor algorithm and short-term outcomes were
11 , we have several useful insights: (1) the k-nearest neighbor algorithm is an efficient and effective
14 sity score matching was conducted by using a nearest-neighbor algorithm (1:1) to account for pretreat
15 erent machine learning approaches, including nearest neighbor algorithms, one-class classifiers, and
16 mismatch, the nearest neighbors, and the non-nearest neighbors, along with the effects of the single
17 ructure, permitting a rapid search for the k nearest neighbors among {x(j)} for an arbitrary point x
18 peripheral hydrophilic subunits, we combined nearest neighbor analyses by intermolecular disulfide bo
19 e stator by use of monoclonal antibodies and nearest neighbor analyses via intersubunit disulfide bon
20 ith image segmentation, centroid mapping and nearest-neighbor analyses in open-source environments, 3
24 al properties of retinal mosaics include the nearest neighbor analysis, from which an index of their
28 s (random forest, support vector machines, K-nearest neighbor and logistic regression) and one recent
29 , our imputation comparisons indicate that k-nearest neighbor and singular value decomposition yielde
30 or rates computed using the Random Forest, k Nearest Neighbor and Support Vector Machine classifiers
31 imental results on 18 subjects, using both k nearest neighbors and support vector machine classifiers
34 which isolates the target cytosine from its nearest neighbors and thereby facilitates its extrusion
35 o the identities of the single mismatch, the nearest neighbors, and the non-nearest neighbors, along
36 ioning tree for sub-linear time searching of nearest neighbors, and then use a new multiple-pair merg
37 roportion of offspring are dropped on second-nearest neighbors, and why triplet approximation is able
38 three machine learning algorithms (LASSO, k-nearest-neighbors, and deep-neural-networks), two gene s
43 temperatures using approximative formulae or Nearest-Neighbor approaches, where one can select differ
44 optimize the local sequence identity or the nearest-neighbor approximation of the change in free ene
46 ery molecule, the contributions of its first-nearest neighbors as a descriptor to determine the wetti
47 on employing dispersal to nearest and second-nearest neighbors, as well as long-distance dispersal ac
48 tion, allowing selective coupling beyond the nearest-neighbor, at separations of hundreds of nanomete
50 This accuracy depended upon the identity of nearest neighbor bases surrounding the CG dinucleotide.
52 onomic categories, but also resulting from a nearest-neighbor bias in the random forest algorithm.
53 ected endometrial cells by CyTOF, and use a 'nearest neighbor' bioinformatics approach to trace cells
54 in large flocks respond to a fixed number of nearest neighbors, but until now it was not understood w
55 ) pi MO is balanced by the fact that the non-nearest-neighbor, C-C interactions in (CO)(4) are antibo
56 C and C --> N) tie the helix together, with nearest-neighbor C7 rings turning the backbone so that i
57 when the particles simply "rattle" in their nearest-neighbor cages, are interrupted by abrupt "avala
58 can be attributed to the p electrons of the nearest-neighbor carbon atoms around the VSiVC divacanci
59 due to the much larger distances between non-nearest-neighbor carbons in (CO)(6) than in (CO)(4).
60 ) is that interactions between 2p AOs on non-nearest-neighbor carbons, which stabilize the a(2u) pi M
62 ctions for in silico fragmentation software, nearest neighbor chemical similarity scoring, random for
64 a benchmark dataset with 2329 proteins using nearest-neighbor classification, FTIP outperformed the s
66 ed splat label were used to train a linear k-nearest neighbor classifier that learnt the color proper
68 ates the resident's performance was within 1 nearest-neighbor classifier of experts after ASSET train
69 oportions of the bond-orientational order of nearest neighbor clusters in colloidal packings by stati
70 cal2a x c expansion of the nuclear cell, and nearest-neighbor Co(2+) moments couple antiferromagnetic
71 analysis (P < .0005) and distance to the kth nearest neighbor compared with random distributions, obt
72 rough contig-to-gene identification by BLAST nearest-neighbor comparison, and through single-contig r
73 scope of the library to include spectra of "nearest-neighbor" compounds that differ from library com
76 en the adaptive radius method is used as the nearest neighbor constructor with STIR when the fixed-k
77 y applied allowing the detection of distinct nearest neighbor contacts for the HPMC-E3 rich preparati
78 A, which are attributed to C-C, C-N and C-O nearest neighbor contacts present in drug-drug interacti
80 tional accommodation should propagate beyond nearest-neighbor contacts, our modeling suggests that lo
82 igh SSB/DNA ratios displays high "unlimited" nearest-neighbor cooperativity (omega(35)), forming long
85 nd fluorescence titration studies to examine nearest-neighbor cooperativity in each binding mode and
86 nteractions; however, in contrast to the non-nearest-neighbor cooperativity observed on longer ssDNA,
88 h pressure phase involves an increase in the nearest-neighbor coordination number while the bond angl
89 result, spatial correlations, as assayed by nearest-neighbor correlation and functional connectivity
92 pin-orbital coupling or a frustrating second-nearest-neighbor coupling is expected to be a source of
94 thus extending to other linear systems with nearest-neighbor coupling the following conclusions: 1)
95 ces, such as abc and abca, have the stronger nearest-neighbor coupling which imply the popular of per
98 y shifts of the local carbonyl groups due to nearest neighbor couplings and environmental factors are
99 st, followed by relatively slow (mus-ms) non-nearest neighbor cross-surface electron transfer from -R
100 is unavailable, we find that the sum of the nearest neighbors' degree is a reliable local proxy for
101 include efficient algorithms for overlap and nearest neighbor detection, coverage calculation and oth
102 Further, Antarctic krill avoid having a nearest neighbor directly overhead, possibly to avoid bl
103 and strain as well as Young's moduli on the nearest neighbor distance and defect types is examined.
105 To calculate diversity, we use the mean nearest neighbor distance of crosses plotted in trait sp
106 statistical distributions of swimming speed, nearest neighbor distance, and three-dimensional nearest
108 re more condensed with a 20% smaller average nearest-neighbor distance and a 30% higher nucleosome de
110 s while incorporating sample variance of the nearest neighbor distances into the attribute importance
111 at speeds of two body lengths per second at nearest neighbor distances of one body length and reach
113 r to minor axes of the best-fit ellipse) and nearest neighbor distances were calculated for each sess
114 change the distribution of cluster sizes and nearest-neighbor distances between Nav1.5 alpha-subunits
115 each other by enabling quantification of the nearest-neighbor distribution of a ligand mixture in a m
119 orithm that processes data sets using fast k-nearest-neighbor estimation of cell event density and ar
120 s (C-W) temperature of theta = -125 K, and a nearest-neighbor exchange coupling constant of J(NN) = -
124 ence of third-neighbor antiferromagnetic and nearest-neighbor ferromagnetic exchange interactions can
125 )} in R(d), the algorithm attempts to find k nearest neighbors for each of x(j), where k is a user-sp
126 nd sparse discriminant analysis (SDA) with k-nearest neighbors for imputation for varying mechanism a
127 h preferential positions at first and second nearest neighbors for interstitial and substitutional Sr
128 ork topology that maximizes the regions with nearest-neighbor framework atom distances from 3 to 4.5
129 ng of transcription factor ARBORKNOX1 to the nearest neighbor genes in a pre-calculated co-expression
130 rlapping plasmonic fields emanating from the nearest-neighbor gold nanoparticle nanocarriers and crea
133 refinement technique (EPSR) to elucidate the nearest neighbor H...O and O...O pair distribution funct
136 To correct the model, new parameters in the nearest-neighbor hopping equation are introduced to acco
137 el was evaluated by comparing a drug and its nearest neighbor (i.e., a drug pair) for common indicati
139 se with 10(5) samples, GEMINI identifies the nearest neighbor in 0.05 sec compared to a brute force s
140 ning with a one-wingspan lateral distance to nearest neighbors in the same horizontal plane, scales l
142 revealed that both peptides favor Chol as a nearest-neighbor in liquid-disordered (ld) bilayers to t
143 derlying interaction structure of data using nearest-neighbors in high dimensions, handles both dicho
144 oulomb repulsion (U) is much larger than the nearest-neighbor inter-site electronic coupling (t).
145 e effect is expected in a 1D antiferromagnet nearest-neighbors interacting Ising chain in the presenc
146 e use a one-dimensional lattice model with a nearest-neighbor interaction between individual integrin
147 proach allowed us to distinguish alternative nearest-neighbor interaction models, and quantifies the
148 tically a four-site square lattice with next-nearest neighbor interactions and a six-site checkerboar
149 d molecular dynamics (MD) simulations of the nearest neighbor interactions combined with a Genalized
153 lo-based simulation protocol that allows for nearest-neighbor interactions between adjacent binding s
154 rains are created with effectively repulsive nearest-neighbor interactions or rather evolve into such
155 Cholesterol stabilizes the L(o) state by nearest-neighbor interactions, giving rise to the appear
156 by Monte Carlo simulations on a lattice with nearest-neighbor interactions, which are derived from ex
158 econd, the branch lengths of all the simple (nearest neighbor interchange) rearrangements of a tree c
164 endent Modelling of Class Analogy (SIMCA), k-Nearest Neighbor (k-NN), Principal Component Analysis fo
165 oaches including logistic regression (LR), k-nearest neighbor (k-NN), support vector machine (SVM), r
166 nt Modeling of Class Analogies (SIMCA) and K-Nearest Neighbors (k-NN) were applied to the four chroma
167 hods, namely Support Vector Machine (SVM), k-Nearest Neighbors (k-NN), and Decision Tree, were employ
168 ast square discriminant analysis (PLS-DA), k-nearest neighbors (k-NN), support vector machine (SVM) a
169 sparate data science techniques, including k-nearest neighbors, kernel methods, and multiscale analys
170 classified 50.2% of the samples correctly, K-nearest neighbor (KNN) 86%, and soft independent modelin
171 factors the best available methods utilize k-nearest neighbor (KNN) algorithms to make specificity pr
172 Here we present a modified version of the K-nearest neighbor (KNN) approach which accounts for trunc
177 learning models, namely, Naive Bayes (NB), K-nearest neighbor (KNN), logistic regression (LR), random
178 In all cases studied, CLPP accompanied by k-Nearest Neighbors (kNN) algorithm was found to outperfor
179 etwork (NN), support vector machine (SVM), k-nearest neighbors (kNN) and random forest (RF) methods.
182 ast-squares discriminant analysis (PLSDA), K nearest neighbors (KNN), and support vector machines dis
183 (PCA), linear discriminant analysis (LDA), k-nearest neighbors (kNN), partial least square-discrimina
184 for assisting MeSH annotation, which uses k-nearest neighbors (KNN), pattern matching and indexing r
186 ayer properties overall, except for the four nearest neighboring lipids, while the effect of PCB 52 i
187 f minimum substitution, mean substitution, k-nearest neighbors, local least squares regression, Bayes
188 the surface Fe sites, and their synergy with nearest-neighbor M sites through formation of O-bridged
189 he balance of competing interactions between nearest-neighbor magnetic moments can be directly contro
191 iple confounders using linear regression and nearest neighbor matching based on propensity score esti
194 The LLT recipients were matched 1:2 with a nearest neighbor method to single-organ lung recipients.
196 itals, and the magnetic interactions between nearest-neighbor Mn(2+) atoms are antiferromagnetic.
197 al calculations reveal not only the expected nearest-neighbor Mn(III)2 exchange couplings via superex
198 els (the statistical regression model, the K nearest neighbor model and the modified version of the b
199 ary structure is typically predicted using a nearest neighbor model based on free energy parameters.
200 otide thermodynamic stability derived by the nearest neighbor model representation and (v) nucleic ac
203 e position) was found in accordance with the nearest-neighbor model, where the considered configurati
204 ic penalty, not captured by state-of-the-art nearest neighbor models of DNA, due to the additional ov
205 s Analysis (CoMSIA) and variable-selection k-nearest neighbor models, from which 3D-molecular fields
210 n this paper, we describe the Multi-Source k-Nearest Neighbor (MS-kNN) algorithm for function predict
211 ian facial muscles reverted to an ancestral 'nearest-neighbor' muscle-bone type of attachment seen in
212 assification trees, discriminant analysis, k-Nearest neighbor, naive Bayes, and support vector machin
213 zation, whereas the shell was simulated as a nearest neighbor network promoting local GABAergic conne
216 mise increasingly accurate recovery of RNA's nearest-neighbor (NN) free-energy parameters, but these
218 Ti/Ge distribution has been deduced in next nearest neighbor (NNN) sites that surround tetrahedral P
220 r nucleotides, suggesting that the effect of nearest-neighbor nucleotides on repair of 7MeGs in the c
221 of 7MeGs by dimethyl sulfate is affected by nearest-neighbor nucleotides, being enhanced at sites ne
223 lycosylase in vitro is similarly affected by nearest-neighbor nucleotides, suggesting that the effect
224 Regardless of sensory area, random and k-nearest neighbors null graphs failed to capture the stru
226 rithm for function prediction, which finds k-nearest neighbors of a query protein based on different
227 o account for interactions between the first nearest neighbors of Ca, Pb and Sb in the ternary Ca-Sb-
231 nt, mostly contributed by 2p orbitals of the nearest-neighbor oxygen atom (O(NN)) with two dangling b
233 linear model regression of distances between nearest-neighbor pairs projected onto the predictor dime
235 for 29 RNA duplexes with GU pairs to improve nearest neighbor parameters for predicting stabilities o
236 he DeltaG degrees 37 values predicted by the nearest neighbor parameters for RNA duplexes in 20% PEG
238 s 37 values predicted by the 20% PEG 200 RNA nearest neighbor parameters were closer to the experimen
240 weight of 200 g/mol) solution (PEG 200), and nearest neighbor parameters were derived using this data
242 ches, where one can select different sets of Nearest-Neighbor parameters, corrections and formulae.
244 gh the integration of predictions from the k nearest neighbor phenologs, comparing classifiers and we
247 residues at the cleavage site (P1, P1') and nearest-neighbor positions (P2, P2') and their positiona
248 rgetically convenient for them to pair up in nearest-neighbor positions taking a D2-D2 or D2-D1 confi
250 t a randomized algorithm for the approximate nearest neighbor problem in d-dimensional Euclidean spac
251 lop a new feature selection technique called Nearest-neighbor Projected-Distance Regression (NPDR) th
252 possibility of treatment selection bias, 1:1 nearest neighbor propensity score matching was performed
253 rate calculations of the ground state of the nearest-neighbor quantum spin S = 1/2 Heisenberg antifer
254 dding to read mapping, thus rephrasing it to nearest neighbor queries in a q-gram frequency vector sp
257 iting the nonlocal atomic interaction in the nearest neighbor region, and the nonlocal coefficient is
258 Using a machine-learning technique called k-nearest-neighbors regression, we build a model which pre
259 ivation that accounts for interactions among nearest-neighbor regulatory units (RUs) in a spatially e
260 alysis (matching ratio, method to choose the nearest neighbors, replacement and method for statistica
261 nd TiO2(e(-)) was followed by rapid (<20 ns) nearest-neighbor -Ru(II)OH2(2+) to -Ru(III)P(3+) electro
264 he benefits of variance and distance between nearest-neighbor(s) minimization, providing a solution f
265 es this space using an efficient index-aware nearest neighbor search method based on locality sensiti
266 algorithmic approach that uses metric-space nearest neighbor search over a template database of fixe
268 30 most frequently occurring single mismatch-nearest neighbor sequence combinations found in experime
270 atic ordering and disordering far beyond the nearest-neighbor shells with the combination of temperat
271 l, hidden Markov model, logical algorithm, k-nearest neighbor, single value decomposition, and random
273 this causes an almost complete occupation of nearest-neighbor sites and almost a doubling of the DNA
274 but nonetheless possible intercalation into nearest-neighbor sites can consistently describe the mec
275 We furthermore show that intercalation into nearest-neighbor sites needs to be considered when estim
276 and 420 K reveals emerging asymmetry in the nearest-neighbor Sn-Br correlations, consistent with dyn
277 , we describe a novel algorithm named shared nearest neighbor (SNN)-Cliq that clusters single-cell tr
278 Dicke-Ising model with an antiferromagnetic nearest-neighbor spin-spin interaction in circuit QED wi
279 photon interaction and the antiferromagnetic nearest-neighbor spin-spin interaction, and then predict
280 mic and experimental parameters that include nearest neighbor stacking energies, loop entropy effects
283 itative description of the nearest- and next-nearest-neighbor structure with a quantitative descripti
284 nt crystal in which the P atoms form a third-nearest-neighbor sublattice and "In-P" dimers are orient
285 ing Diagonal Linear Discriminant Analysis, k-Nearest Neighbor, Support Vector Machine and Random Fore
286 rcRNA datasets when compared with XGBoost, k-nearest neighbor, support vector machine, random forest,
287 dynamics of plug trains: Interactions among nearest neighbors take place through the wetting films a
288 SNN-Cliq utilizes the concept of shared nearest neighbor that shows advantages in handling high-
289 ls, including the Logistic Regression, the K-Nearest Neighbor, the Support Vector Machine, and the Ar
290 scribing the population of distances between nearest neighbors: the lengths (di(o)) of distances and
291 prediction methods depend on the underlying nearest-neighbor thermodynamic model remains a fundament
292 in immunocompromised individuals and is the nearest neighbor to the causative agent of tularemia and
293 ily of machine learning algorithms that uses nearest-neighbors to select features whose association w
294 d distance (metric range), a fixed number of nearest neighbors (topological range), a 'shell' of near
295 d abundance, we compare its performance to K-nearest neighbors' type approaches, Random Forest, GSimp
296 onstrate that the excitonic coupling between nearest neighboring units in the tethered superstructure
298 clear differences in the forces stabilizing nearest-neighbor versus non-nearest-neighbor cooperativi