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1 called DRS and MemA; a protein localized in nuclear speckles).
2 noticeably only after initial contact with a nuclear speckle.
3 fficient splicing of the IAV M transcript in nuclear speckles.
4 In addition, RCs coalesce at and reorganize nuclear speckles.
5 , the endogenous FRG1 is not associated with nuclear speckles.
6 on-human primate ISG15 from the cytoplasm to nuclear speckles.
7 olding protein for RNA processing factors in nuclear speckles.
8 ganization of pre-mRNA processing factors in nuclear speckles.
9 gulation by sequestering its constituents in nuclear speckles.
10 -3 reveals localization of these isoforms to nuclear speckles.
11 omatin that enables clustering around common nuclear speckles.
12 e and forms UBC26-RFA4-receptor complexes in nuclear speckles.
13 ein for proteosomal degradation, possibly in nuclear speckles.
14 - a property essential for its assembly into nuclear speckles.
15 oss and relocalizes to splicing antigen-rich nuclear speckles.
16 results in its subnuclear localization into nuclear speckles.
17 SR proteins do not immediately colocalize in nuclear speckles.
18 a rapid exchange rate of splicing factors in nuclear speckles.
19 with delayed localization of SR proteins to nuclear speckles.
20 issue, where they interact and colocalize in nuclear speckles.
21 tention of hypophosphorylated SR proteins in nuclear speckles.
22 nto subnuclear foci which are reminiscent of nuclear speckles.
23 full-length protein accumulates in distinct nuclear speckles.
24 in about 10% of the cells EVI1 localizes in nuclear speckles.
25 colocalizes with the splicing factor SC35 in nuclear speckles.
26 monstrated that ER81 and p300 colocalized to nuclear speckles.
27 tion of their signals are colocalized within nuclear speckles.
28 in coiled bodies and nucleoli, and later in nuclear speckles.
29 inositol signaling pathways are localized at nuclear speckles.
30 mDEAH9 and splicing factor SC35 in punctate nuclear speckles.
31 ecessary nor sufficient for targeting to the nuclear speckles.
32 population of Tax is tightly associated with nuclear speckles.
33 ncreased dephosphorylation of SR proteins in nuclear speckles.
34 it decreases in gene-rich regions located at nuclear speckles.
35 ] and 61 NHCCs are consistently found at the nuclear speckles.
36 els than genes that are located farther from nuclear speckles.
37 anscript populations of Polycomb domains and nuclear speckles.
38 15 from the nucleoplasm to the nucleolus and nuclear speckles.
39 R proteins phase separate and participate in nuclear speckles.
40 tional condensates, splicing condensates and nuclear speckles.
41 tion of the viral replication complexes with nuclear speckles.
42 odulate the size, stability, and dynamics of nuclear speckles.
43 nt of the speckle-type POZ protein (SPOP) to nuclear speckles.
44 ion between them, indicate they associate at nuclear speckles.
45 of phosphorylated SC35, which is retained in nuclear speckles.
46 into a compartment enriched in SC35-positive nuclear speckles.
47 and Malat1, a large ncRNA that localizes to nuclear speckles.
48 bserved for HSP70 transgenes associated with nuclear speckles.
49 ple genes and in a higher number of enlarged nuclear speckles.
50 a DNA- and RNA-binding protein localized in nuclear speckles.
51 aled costaining between PABP1 and markers of nuclear speckles.
52 s the assembly of mRNA processing factors in nuclear speckles.
53 oteins that we validated here as enriched in nuclear speckles.
54 ns and RNA components in the organization of nuclear speckles.
55 speckles and are visible as doughnuts around nuclear speckles.
56 antly nuclear and localized to SC35-positive nuclear speckles.
57 iquitinated, stabilized, and rerouted to the nuclear speckles.
58 promyelocytic leukemia nuclear bodies (38), nuclear speckles (27), paraspeckles (24), Cajal bodies (
60 ed Ubc9 depletion effectively suppresses WT1 nuclear speckles, a SUMO-1-deficient WT1(+KTS)(K73, 177R
62 oval in response to stress is coordinated in nuclear speckles, adding a component of spatial regulati
65 lear with specific enrichment of alphaCP1 in nuclear speckles, alphaCP3 and alphaCP4 are restricted t
67 AML1b and AML1b(Del179-242) are localized to nuclear speckles, AML1b(Del179-242) was observed to have
69 Tax co-localized with phospho-DNA-PK into nuclear speckles and a nuclear excluded Tax mutant seque
70 t the (GGGGCC)n repeat RNA co-localizes with nuclear speckles and alters their phase separation prope
72 ular protein kinase TAO2 as a constituent of nuclear speckles and as a factor required for the integr
73 rtially colocalizes with splicing factors in nuclear speckles and assembles into spliceosomal complex
77 Cisplatin was preferentially enriched in nuclear speckles and excluded from closed-chromatin regi
78 with the nuclear matrix fail to localize to nuclear speckles and exhibit reduced transcriptional act
80 ghbourhoods, exposing a general link between nuclear speckles and gene expression dysregulation in hu
81 overexpressing either isoform displayed both nuclear speckles and GFP fluorescence throughout the nuc
82 mises the association of splicing factors to nuclear speckles and influences the levels and activity
83 he expression of Vpr excludes SAP49 from the nuclear speckles and inhibits the formation of the SAP14
84 Here we show that PIPKIalpha co-localizes at nuclear speckles and interacts with a newly identified n
85 The longer Ania-6 protein colocalizes with nuclear speckles and is associated with key elements of
86 at Malat1 with a SINE deletion forms diffuse nuclear speckles and is frequently translocated to the c
89 tin loops and nuclear sub-structures such as nuclear speckles and nucleoli to the models' predictions
91 xf1 recruitment and may allow mRNAs to leave nuclear speckles and properly dock with the nuclear pore
92 est that SR proteins mediate the assembly of nuclear speckles and regulate gene expression by influen
93 ur results update older proteomic studies of nuclear speckles and should provide a useful reference d
94 n complexes traffic to and accumulate within nuclear speckles and that these steps precede the comple
96 esicle stage, PARP-1 protein associates with nuclear speckles and upon meiotic resumption, undergoes
97 on of membrane-less organelles (specifically nuclear speckles) and of organelle heterogeneity on spli
98 ein BRM co-localizes with SYT and SYT-SSX in nuclear speckles, and also interacts with SYT and SYT-SS
99 nteraction with Pi04089, its localization to nuclear speckles, and its increased accumulation when co
101 aining functional splice sites accumulate in nuclear speckles, and our data suggest that splicing occ
102 AD3 and PCBP1 to colocalize in SC35-positive nuclear speckles, and the two proteins interact in the v
103 N displayed close localization in and around nuclear speckles, and their physical association in prot
111 ibution, suggesting that CGBP accumulates at nuclear speckles as a result of protein/protein interact
112 uilding upon our prior research establishing nuclear speckles as pivotal membrane-less organelles for
113 cells, hPrp17 is highly concentrated in the nuclear speckles, as is SC35 and many other splicing fac
114 g the levels of several proteins involved in nuclear speckle assembly and splicing, including SC35 an
117 nd SPOP (speckle-type POZ domain protein), a nuclear speckle-associated protein that recruits substra
120 paper, we dissect cis-elements required for nuclear speckle association of the heat shock protein 70
122 ar compartment, where it resides in distinct nuclear speckles at or near sites of DNA replication.
125 near or at intermediate distance (HSPH1) to nuclear speckles but shifting even closer with transcrip
126 n, we show that Par 6 localizes precisely to nuclear speckles, but not to other nuclear structures, a
127 Many active genes reproducibly position near nuclear speckles, but the functional significance of thi
128 major nuclear organelles including nucleoli, nuclear speckles, Cajal bodies, as well as in the cluste
129 s, including nucleoli, the nuclear envelope, nuclear speckles, centrosomes, mitochondria, the endopla
130 although only the C terminus accumulates as nuclear speckles characteristic of the intact protein.
132 the nucleus acts as a scaffolding protein in nuclear speckle complexes, similar to its role in the cy
134 denosine analogue previously shown to affect nuclear speckle composition, we unexpectedly found that
135 ir highly looping partners are enriched near nuclear speckles - condensate bodies implicated in trans
137 cleotides, results in the mislocalization of nuclear speckle constituents in a transcription-dependen
139 nucleoli, nucleoplasmic transcription sites, nuclear speckles, constitutive heterochromatin domains,
140 these sites overlap with a subset of larger nuclear speckles containing phosphorylated polymerase II
142 ive in transcription and DNA replication and nuclear speckles containing pre-mRNA splicing factors we
143 splicing efficiency and spatial proximity to nuclear speckles could explain this counterintuitive beh
144 ction leads to sequestration of PABP1 in the nuclear speckles, creating a state within the cell that
146 statistically significant shifts in relative nuclear speckle distances in pair-wise comparisons betwe
147 16, K562); however, these moderate shifts in nuclear speckle distances tightly correlate with changes
148 LL-ELL fusion gene delocalized EAF1 from its nuclear speckled distribution to a diffuse nucleoplasmic
150 nefficiently exported, do not associate with nuclear speckle domains but are instead distributed thro
151 l co-activator CREB-binding protein (CBP) in nuclear speckle domains in the developing brain and in n
153 components, a portion of CIP29 localizes in nuclear speckle domains, and its efficient recruitment t
154 sibility that pre-mRNA undergoes splicing in nuclear speckle domains, before their release by TREX co
159 A subpopulation of pol IIo was localized to nuclear "speckle" domains enriched in splicing factors,
164 we examined the formation and composition of nuclear speckles during stress induction with tubercidin
167 %) were associated with splicing factor-rich nuclear speckles even though the speckles occupied <10%
168 induce this PIF3 phosphorylation, as well as nuclear speckle formation and degradation, by direct int
169 nuclear compartments-the nuclear lamina and nuclear speckles-from different regions of the developin
172 such as the nucleolus, stress granules, and nuclear speckles have been designated as biomolecular co
173 ion stress induces the release of SF3B1 from nuclear speckles in a manner that depends on FANCI and o
174 Collectively, our data highlight a role of nuclear speckles in both co- and posttranscriptional spl
176 nce assays revealed the emergence of H3K9me2 nuclear speckles in committed HSPCs, consistent with pro
178 cells, followed by increasing BRCA1-positive nuclear speckles in late S phase and G2/M phase cells.
179 KIIbeta and SPOP interact and co-localize at nuclear speckles in mammalian cells, and SPOP mediates t
182 in a direct path over long distances toward nuclear speckles in response to transcriptional activati
183 t regulates the formation and maintenance of nuclear speckles in the interphase nucleus is poorly und
185 pre-mRNA splicing factors are recruited from nuclear speckles, in which they are concentrated, to sit
186 early afternoon, generates diffuse and fluid nuclear speckles, increases their interactions with chro
188 sequence-dependent RNA positioning along the nuclear speckle interface coordinates RNA splicing.
192 Significantly, however, the structure of nuclear speckles is lost when Par 6 levels are reduced b
193 A-seq mapping suggests that gene distance to nuclear speckles is more deterministic and predictive of
194 nally, directed recruitment of a pre-mRNA to nuclear speckles is sufficient to increase mRNA splicing
195 Hsp70 transgenes and their transcripts with nuclear speckles is transcription dependent, independent
196 olocalizes with pre-mRNA splicing factors in nuclear speckles, its depletion by RNAi leads to cell cy
197 mentalization states genome-wide relative to nuclear speckles, lamina, and putative associations with
198 e to trap TNNT3 pre-mRNA, driving it outside nuclear speckles, leading to an altered SC35-mediated sp
199 rease of splicing particle localization into nuclear speckles leads to a disproportionate enhancement
200 nomous mammalian 12-hour ultradian rhythm of nuclear speckle liquid-liquid phase separation (LLPS) dy
201 oth positive and negative regulators for the nuclear speckle localization of a long noncoding RNA, MA
202 HRAP3 by siRNA resulted in a decrease in the nuclear speckle localization of WTAP, whereas the nuclea
203 A protein and demonstrate that it exhibits a nuclear speckled localization and possesses the ability
204 rich (SR) splicing factors and appearance of nuclear speckle-localized HIN1 during low water potentia
205 n by sut-6 occurs independent of other known nuclear speckle-localized suppressors of tau such as sut
206 ng pathway that targets the viral M1 mRNA to nuclear speckles, mediates splicing at these nuclear bod
207 ng pathway that targets the viral M1 mRNA to nuclear speckles, mediates splicing at these nuclear bod
215 REBP-2 heterodimer localize predominantly to nuclear speckles or foci, with some cells showing a diff
216 We have identified 7SK RNA to be enriched in nuclear speckles or interchromatin granule clusters (IGC
217 ions , association of some active genes with nuclear speckles or transcription "factories", and assoc
220 HSP70 transgenes moving curvilinearly toward nuclear speckles over approximately 0.5-6 mum distances
223 nti-RNAP I/III antibody-positive sera showed nuclear speckled patterns, but nucleolar staining was re
224 ear bodies including nucleoli, Cajal bodies, nuclear speckles, Polycomb bodies, and paraspeckles are
228 this issue of Neuron, Wu et al.(1) show that nuclear speckle proteins are sequestered by both nuclear
229 100 sorted proteins, respectively, are known nuclear speckle proteins, including proteins that we val
231 Collectively, our results demonstrate that nuclear speckles provide an architectural basis for nucl
232 hough gene expression correlates mostly with nuclear speckle proximity, DNA replication timing correl
234 of residual Ser-2-phosphorylated RNAP II to nuclear speckles reflects a host response to the inhibit
238 results suggest that the assembly of EVI1 in nuclear speckles requires the intact HAT activity of the
239 n of HDAC5 and co-localization with MEF2s in nuclear speckles requiring serine residues 259 and 498,
241 , we provide evidence for the involvement of nuclear speckle resident proteins and RNA components in
247 While wild-type SPOP localizes to liquid nuclear speckles, self-association-deficient SPOP mutant
248 bers of splicing factors are concentrated in nuclear speckles, some of which occur at highly active t
249 nery complexes and splicing processes within nuclear speckles (specific type of non-membrane-bound or
251 raneless organelles (MLOs) such as nucleoli, nuclear speckles, stress granules, or processing bodies.
253 sed exclusively in the nucleus, and within a nuclear speckle structure that has recently been describ
254 r inhibition of its kinase activity disrupts nuclear speckle structure, decreasing the levels of seve
255 rated that Tax localizes to a multicomponent nuclear speckled structure (Tax speckled structure [TSS]
257 tors including U2AF65B, U2A', and U2AF35A in nuclear speckles, suggesting SFPS might be involved in t
258 a largely non-overlapping set of euchromatic nuclear speckles, suggesting that Set1A and Set1B each b
259 re larger for loop apexes mapping closest to nuclear speckles, suggesting the possibility of conserva
260 ) polymerase, which we have termed Star-PAP (nuclear speckle targeted PIPKIalpha regulated-poly(A) po
261 copy, we show that phyB and cry2 interact in nuclear speckles that are formed in a light-dependent fa
263 Some structures are always present, such as nuclear speckles that contain RNA-binding proteins (RBPs
265 ingers three and four, localizes to discrete nuclear speckles, the function of which is unknown.
266 ough the long MALAT1 transcript localizes to nuclear speckles, the small RNA is found exclusively in
267 . elegans RRM proteins, localizes to dynamic nuclear speckles; this localization pattern supports a r
268 s PABII protein molecules to relocalize from nuclear speckles to a uniform distribution throughout th
270 ridging of transcriptionally active RCs with nuclear speckles to form structures that enhance export
277 RNA splicing, and redistributes it from the nuclear speckles to the nucleoplasm, resulting in cyclin
279 ate that transcripts at Polycomb domains and nuclear speckles undergo distinct RNA processing mechani
280 Finally, we find an increase in hnRNP K in nuclear speckles upon IAV infection, which may alter acc
282 Specifically, lncRNA and RBP localization to nuclear speckles was disrupted, exon junction complex (E
288 d to direct this protein to the periphery of nuclear speckles, where coordinated transcription/RNA pr
289 here that T1L, but not T3D, mu2 localizes to nuclear speckles, where it forms a complex with the mRNA
290 express a protein variant that localizes to nuclear speckles, where it targets a cell mRNA splicing
291 itions PGC-1alpha is located within discrete nuclear speckles, whereas the expression of ERR-alpha re
292 RTe antibody reveal discrete cytoplasmic and nuclear speckles, which contain RARalpha in an RA-sensit
293 containing R-MCDs increases the cohesion of nuclear speckles, which induces selective capture of pur
294 distinct subnuclear domains, identified as "nuclear speckles," which also contained pre-mRNA process
295 nalysis demonstrated that Glis2 localized to nuclear speckles while in most cells CtBP1 was found dif
296 ession correlates inversely with distance to nuclear speckles, with chromosome regions of unusually h
297 70 transgenes associate with the exterior of nuclear speckles, with Hsp70 transcripts accumulating wi
298 gene loci already preposition very close to nuclear speckles, with the remaining positioned near or
299 d interactions with regulatory elements near nuclear speckles, yet CTCF looping is robust toward the
300 In the nucleus Pnn is concentrated in the "nuclear speckles," zones of accumulation of transcriptio