ライフサイエンスコーパス: pairwise

1 ethyl acetate-1-(13)C, i.e., the product of pairwise addition of parahydrogen to vinyl acetate-1-(13

2 Correlations and percentage of pairwise agreement among rankings were estimated to info

3 It is based on pairwise alignment of profile Hidden Markov models (HMMs

4 Several methods have been proposed for pairwise alignment of single molecule optical maps-calle

5 Using pairwise alignment with reference sequences, MPs have be

6 ures of selection were identified using: (i) pairwise allele frequency differences; (ii) genome scan

7 ify positionally conserved couplings between pairwise amino acids and aid rational protein design.

8 hypothesis 2, we used mixed effects models, pairwise analyses, and survival analysis to address samp

9 It took less than 40 h for the pairwise analysis of 5000 individuals genotyped with rou

10 is further supported by estimating E by both pairwise and C(q) calibration methods for the 16 replica

11 ptimal mean crosslink lifetime that promotes pairwise and cluster gene interactions through "flexible

12 ts in this treatment drives the emergence of pairwise and higher-order epistasis for fitness at loci

13 tia, the amylolytic function is dominated by pairwise and higher-order interactions.

14 Pairwise and network meta-analyses on the relationship b

15 interactions in bulk water are dominated by pairwise and non-pairwise cooperative interactions.

16 n perception to show how flies combine local pairwise and triplet correlations to reduce variability

17 shown that motion percepts incorporate both pairwise and triplet spatiotemporal correlations that co

18 The addition of specific pairwise- and high-order-epistatic coefficients decrease

19 irwise gene similarity by averaging over all pairwise annotation similarities, had consistently poor

20 Systematic pairwise assessment of the Drosophila orthologues of fiv

21 Through pairwise association analyses, we identified 93 operatio

22 Pairwise associations between clinical outcomes, and bet

23 Here, we introduce PAFway, which estimates pairwise associations between functional annotations in

24 e explained by the order of the strengths of pairwise attraction: H:L > P:H > S:P > S:L, deduced from

25 Based on phylogenetic distance and pairwise average nucleotide identity values, both comamm

26 bcommunities and increase in inter-community pairwise beta-diversity over time support this.

27 The recipient repertoire was most similar (pairwise beta-diversity) to that of donor at day 100, bu

28 ify 'scrambles' (periods of time in which no pairwise binaries exist) as the key dynamical state that

29 Although pairwise biomarker correlations tended to have similar d

30 Pairwise breeding generated lineages of offspring with b

31 By assessing the infectivity with > 18 000 pairwise challenges, we documented directional selection

32 We experimentally confirm this prediction in pairwise cocultures assembled from a diverse set of spec

33 elihood estimates for the strength of direct pairwise coevolution by coupling a well-established coev

34 Two-reader agreement, as assessed by pairwise Cohen kappa statistics, varied as a function of

35 tibacter actinomycetemcomitans change during pairwise coinfection in a murine abscess with each of 15

36 l of biparatopic antibodies representing the pairwise combination of 11 parental monoclonal antibodie

37 requencies of concurrent infection with each pairwise combination of the vaccine types and high-risk

38 By analyzing all 376 pairwise combination of these gene nodes, we found that

39 llion interactions generated by all possible pairwise combinations of 1,346 predicted structure model

40 atalyzed reaction cycles is created from the pairwise combinations of four reagents.

41 MCAP library of 11,934 arrays targeting 325 pairwise combinations of genes implicated in metastasis.

42 to 48% (IQR: 17% to 31%) of exposures across pairwise combinations of sixteen common antibiotics and

43 Here, we have dynamically imaged, in pairwise combinations, the vesicular transport of fluore

44 ous gene (Da, Mef2, Ube3a, Zfh1, XNP) and in pairwise combinations.

45 Methods: We performed a pairwise comparative analysis of early response to first

46 ssively reducing the computational burden of pairwise comparison among large samples of sequences, an

47 performed a network meta-analysis and direct pairwise comparison analysis of efficacy and safety outc

48 or calculating the statistics, replacing the pairwise comparison and counting processes with a data s

49 d 10.8% with surgical bypass (P<0.05 for all pairwise comparison except PTA versus stent).

50 ach input parameter is generated utilizing a pairwise comparison matrix.

51 Graph clustering enables a broader range of pairwise comparison measures to be used to assess aptame

52 Pairwise comparison revealed that the quaternary ammoniu

53 Pairwise comparison showed mean resting energy expenditu

54 Pairwise comparison using OPLS-DA also displaying good r

55 licated, and their uniqueness confirmed with pairwise comparisons (based on Mash distances) between A

56 mption using patient-controlled analgesia in pairwise comparisons between the 4 groups (multiplicity-

57 relapsing multiple sclerosis have focused on pairwise comparisons but the effectiveness of different

58 In post hoc pairwise comparisons controlling for multiple comparison

59 , 41 eyes; NIU, 144 eyes; P <= 0.050 for all pairwise comparisons except between normal and questiona

60 computational speedup allowed us to conduct pairwise comparisons of 1197 complete genomes (780 eukar

61 s examined in-hospital mortality in the four pairwise comparisons of each trial drug and its control

62 with Bonferroni correction was performed in pairwise comparisons of group PCD values.

63 Further, pairwise comparisons of GVP profiles with 8 SNPs demonst

64 Pairwise comparisons of individuals with high-impact inh

65 inal layers to distinguish between all three pairwise comparisons of the severity in DR (NoDR vs NPDR

66 Wilcoxon rank sum test was used to assess pairwise comparisons of the various PI concentrations to

67 he mode of action of these chemicals, simple pairwise comparisons of treated and untreated samples ar

68 The pairwise comparisons showed significant differences with

69 Pairwise comparisons showed that 9 and 23 taxa differed

70 After propensity-matched pairwise comparisons were made, survival after all TCS-V

71 he user can filter and compare any number of pairwise comparisons within a single A-Lister differenti

72 Additionally, users can filter the pairwise comparisons within the input files by fold chan

73 macular degeneration, respectively, with all pairwise comparisons yielding statistically significant

74 lacement, and 54.7% with PTA (P<0.05 for all pairwise comparisons).

75 r in UM and CM than in HC (P <= 0.04 for all pairwise comparisons).

76 characteristic curve, 0.65; p < 0.01 for all pairwise comparisons).

77 DEGs were submitted to pairwise comparisons, and selected DEGs were validated b

78 and comparing lists of DEEs across multiple pairwise comparisons, typically done by writing custom c

79 re generated using treatment effect, for all pairwise comparisons, where WMD < 0 favors the column-de

80 ts (P < .001), as well as between cohorts in pairwise comparisons, with the most significant gains in

81 ues, and timepoints that result in dozens of pairwise comparisons.

82 tions can also be performed on any number of pairwise comparisons.

83 sitions/regions (DMPs/DMRs), across multiple pairwise comparisons.

84 variance with Games-Howell post hoc test for pairwise comparisons.

85 ce in the c-indices of each score based upon pairwise comparisons.

86 sity regions (7 versus 45 per 100 000, P-for-pairwise-comparisons <0.001) and increase in TAVR in-hos

87 For this reason, pairwise competition experiments are the current "gold s

88 endent or independent of reproduction in the pairwise concentration correlation based on Pearson corr

89 act 3D arrangements of CTs from this type of pairwise contact data will thus increase our ability to

90 nformation, and also describe limitations of pairwise contacts alone to predict absolute 3D positions

91 ible using methods based on population-level pairwise contacts.

92 bulk water are dominated by pairwise and non-pairwise cooperative interactions.

93 to a reference MRSA genome and detection of pairwise core genome single-nucleotide polymorphisms.

94 n the confidence and accuracy of prediction (pairwise correlation coefficient, 0.26; p < 0.001).

95 ts with 144 brain regions (nodes) and 10,152 pairwise correlations (after excluding 144 diagonal edge

96 Strikingly, our data reveal that functional pairwise correlations and their structure are subject to

97 Despite pairwise correlations being small (on the order of 10(-3

98 r tree size and season, we found no negative pairwise correlations between guild abundances per plot,

99 ts models have been used to infer all-by-all pairwise correlations between sites in deep multiple seq

100 hat engaging in a novel motor task increased pairwise correlations during nested spindles.

101 after animals practiced a novel motor task, pairwise correlations increased during nested spindles,

102 xytocin strongly decreased the frequency and pairwise correlations of spontaneous activity events in

103 some camps arguing, for instance, that mean pairwise correlations or global fluctuations are importa

104 Other pairwise correlations were moderate to weak (range: LCIS

105 Moderate to high pairwise correlations were observed between PFAS concent

106 an rates were similar in light and darkness, pairwise correlations were significantly stronger during

107 nerates single-cell selectivity, patterns of pairwise correlations, and the same ability of excitator

108 ke-count and subthreshold membrane potential pairwise correlations, little is known about how differe

109 cross units by narrowing the distribution of pairwise correlations.

110 nctional-subgroup conserved residues, and as pairwise correlations.

111 rom the analysis of units activity and their pairwise correlations.

112 In this process, pairwise couplings are filtered according to the relativ

113 deep multiple sequence alignments, and these pairwise couplings have improved 3D structure prediction

114 ed using two different approximations to the pairwise couplings.

115 ly higher total coordination (sum of all the pairwise covariances) following training than a techniqu

116 eloped program for statistical prediction of pairwise covariation from sequence alignments, but it in

117 a high-efficient, barcode-free and scalable pairwise CRISPR libraries in mammalian cells for identif

118 el panel of 3025 yeast hybrids, derived from pairwise crosses between natural isolates and examined a

119 aive protocols involving the drugs alone, in pairwise cycles, or in a four-drug uniform cycle.

120 ior in two treatments in which subjects make pairwise decisions that determine own and others' income

121 s [Fe(4)S(4)](2+) clusters typically exhibit pairwise delocalized electronic structures in which each

122 ment evolve according to an independent or a pairwise dependent evolutionary process, and to simultan

123 ences at day 1, with no significant adjusted pairwise differences at day 3.

124 e visualization and investigation of all the pairwise differences between considered masses.

125 nformation space, preserving the geometry of pairwise dissimilarities between pattern vectors, and mo

126 ean distances are widely applied to describe pairwise dissimilarity between samples.

127 ses), predominantly IMP and KPC, with median pairwise distance of 8 (IQR 4-13) single nucleotide poly

128 of a two-dimensional image by minimizing the pairwise distance values following a Bayesian Metric Mul

129 of the phylogenetic diversity metrics 'mean pairwise distance' (SES(mpd)) and 'mean nearest taxon di

130 ce; and (4) lower and upper bound of all the pairwise distances among the members of two sets.

131 in only two dimensions while preserving the pairwise distances between points in the hierarchy.

132 square error between alignment distances and pairwise distances defined in the embedding space is min

133 It can sketch and calculate pairwise distances for over 87K genomes in 6 minutes.

134 Given these pairwise distances, principal coordinates analysis is co

135 ains using the UPGMA method with uncorrected pairwise distances.

136 We assessed whether the average pairwise diversity calculated using NGS sequences provid

137 NGS-derived average pairwise diversity classified an infection as recent wit

138 Additionally, the average pairwise diversity could be used to estimate the time si

139 ides were available, the NGS-derived average pairwise diversity exhibited a higher sensitivity (90% v

140 g behaviour in comparison between single and pairwise dosage manipulations.

141 nguish interaction modifications from direct pairwise effects in order to maximize information about

142 stness to extinctions compared to equivalent pairwise effects.

143 study is the first to systematically examine pairwise epistasis throughout an entire protein performi

144 Pairwise estimates of overlap were highly variable, like

145 In stepping-stone models, pairwise F(ST) values between archaic and present-day sa

146 High pairwise F(ST) values indicated that the populations hav

147 tions were significantly differentiated with pairwise F(ST) values ranging from 0.086 (Amazon x Solim

148 ation replacement creates a discontinuity in pairwise F(ST) values.

149 dies indicate that the 2 D ResNet module and pairwise features play an important role in improving mo

150 sNet module extracts useful information from pairwise features such as model-derived distance maps, c

151 model quality by integrating sequential and pairwise features using a deep neural network composed o

152 tomic dispersion models within many-body and pairwise formulation, and random phase approximation-bas

153 increased further through the application of pairwise fraction concatenation.

154 site profiles were investigated and compared pairwise from germination to the mature stage between in

155 The Bf-FAD accepts electrons pairwise from NADH, directs one to a lower-reduction mid

156 Image formation is based on pairwise fusion of uniquely tagged and spatially adjacen

157 notation completeness on the distribution of pairwise gene semantic similarity scores, and subsequent

158 e measures, particularly those that create a pairwise gene similarity by averaging over all pairwise

159 lysis and tests all pairs of genes to detect pairwise gene x gene interactions underlying disease.

160 Comparison of pairwise genetic and geographic distances between subspe

161 at some trait-specific genetic variances and pairwise genetic correlations do change.

162 e of HIV-TRAnsmission Cluster Engine (with a pairwise genetic distance threshold of 0.015 substitutio

163 netic context, the latter determined using a pairwise genetic interaction map that identifies numerou

164 s linked to HIV function, comprising >63,000 pairwise genetic perturbations.

165 Pairwise genome comparisons of single nucleotide polymor

166 Based on pairwise genome-wide and amino acid identities with refe

167 Pairwise grape variety classification was also performed

168 detected to differentially express among six pairwise groups.

169 By performing over 2 million pairwise growth simulations of 24 species in a combinato

170 y rapidly and correctly removes 96.2% of all pairwise HCV sample comparisons, outperforming all previ

171 detect kinship between individuals, through pairwise identity by descent (IBD) estimates.

172 Fourier, to fit to displacement fields from pairwise image registration.

173 quality from sequential features and pooled pairwise information generated by 2 D ResNet.

174 Methylation typically reduces the pairwise interaction between proteins.

175 We used the pairwise interaction data to rank all possible high-orde

176 We argue, however, that although pairwise interaction models have provided useful informa

177 aregiver plans (OR, 1.37; 95% CI, 0.67-2.82; pairwise interaction P = .02).

178 d symptom days (OR, 0.90; 95% CI, 0.57-1.42; pairwise interaction P = .03) and change in caregiver pl

179 e analysis with a quadratic model containing pairwise interaction terms.

180 Pairwise interaction testing of all GI/ZTL allelic combi

181 Herein, we experimentally measured all 190 pairwise interactions among 20 antibiotics against Mtb g

182 We discuss pairwise interactions among defined species and systems

183 iversity-interaction modelling revealed that pairwise interactions among species best explained the p

184 While accurate descriptions of the pairwise interactions are available and can be tested by

185 Conversely, pairwise interactions are often not enough to characteri

186 0 local networks, encompassing 24,455 unique pairwise interactions between 1,631 animal and 3,208 pla

187 We then generated a high-content map of pairwise interactions between 171 miRNA-binding sites an

188 set of double-stranded linkers that specify pairwise interactions between loop sequences.

189 utagenesis experiments provided evidence for pairwise interactions between oppositely charged residue

190 el parasites have been assessed by examining pairwise interactions between parasite species.

191 rial view of transcription regulation, where pairwise interactions between regulatory proteins domina

192 3D cross-linked hydrogel network facilitates pairwise interactions between self-trapped beams both in

193 ster DNAs within tripartite rings created by pairwise interactions between Smc1, Smc3, and Scc1.

194 lementation assays were employed to evaluate pairwise interactions between the N-terminal regions of

195 vironmental variation is well-understood for pairwise interactions but not for multi-trophic interact

196 ndings suggest that the type and strength of pairwise interactions can reliably predict the outcome o

197 gorithm, which allows the examination of all pairwise interactions in a remarkably fast manner of lin

198 ,000 strains encompassing approximately 7700 pairwise interactions in five conditions and found that

199 By assaying pairwise interactions of local stimulation across the re

200 iewpoint, that is, one that moves beyond the pairwise interactions of neighbouring trophic levels to

201 Crucially, pairwise interactions reliably explained observed invasi

202 nisation, ranging from species evolution and pairwise interactions to community structure and ecosyst

203 Mutualisms come in different forms, from pairwise interactions to extremely diverse communities,

204 ual antibodies and their [Formula: see text] pairwise interactions to predict the 2n potential combin

205 Potential pairwise interactions were considered where both indicat

206 lly tested how antagonistic and facilitative pairwise interactions within resident model microbial co

207 to identify gene networks with dysregulated pairwise interactions, and are therefore appropriate for

208 physicochemical parameters that characterize pairwise interactions, as well as network properties, in

209 ed visible laser beams, which exhibit strong pairwise interactions, can be generated in a photorespon

210 the former determines transport pathways via pairwise interactions, the latter reflects frustration w

211 nd immune system models within an ABM model: pairwise interactions.

212 d on ligand binding affinity and strength of pairwise interactions.

213 ications have often been described as direct pairwise interactions.

214 represent microbial taxa and edges represent pairwise interactions.

215 ation to identify significantly dysregulated pairwise interactions.

216 licon quantum dots in ~50 ns via a series of pairwise interdot charge transfers.

217 Pairwise interregional correlations in FOS expression da

218 nt reporters (either eGFP or mRFP), injected pairwise into male rat gastrocnemius, subcutaneous WAT a

219 We conducted pairwise invasion tests with four strains of nectar-colo

220 association analyses, we develope an average pairwise ITH index (APITH), which does not depend on the

221 gning Gleason grades, the AI achieved a mean pairwise kappa of 0.62, which was within the range of th

222 Estimation of pairwise kinship coefficients in large datasets is compu

223 eneity of effect sizes and diversity between pairwise LD.

224 s' interactions are typically defined at the pairwise level, multispecies dynamics can be better unde

225 Meanwhile, phase analysis of pairwise LFP recordings revealed the occurrence of long-

226 ailable in Binding MOAD allows us to compute pairwise ligand and binding-site similarities.

227 grating microbe:immune cell readouts through pairwise linear regressions and presenting the top table

228 Pairwise linear regressions between microbial and host i

229 To remove effects of high levels of pairwise linkage disequilibrium (LD), SNPs were also pre

230 manner based on an a priori knowledge of the pairwise magnetic exchange interactions between excited-

231 ir targets) to target hepatocyte miRNAs in a pairwise manner.

232 Pairwise matching (1:1) of the angiotensin-converting en

233 ce comparisons without the need for explicit pairwise matching.

234 ontaneous ferromagnetic correlations through pairwise measurements of spin.

235 rovides more precise estimates than standard pairwise meta-analysis and can rank interventions by eff

236 The pairwise meta-analysis showed that psychological interve

237 In the pairwise meta-analysis, statins with or without ezetimib

238 rect fit of the data to the model behind the pairwise method can yield E estimates of comparable prec

239 ary to assertions in the proposing work, the pairwise method does not yield E estimates a factor of 2

240 We used an automated generalized pairwise modeling framework to generate mixed treatment

241 in 67 phenotypes, and in 51 phenotypes every pairwise mutant interaction is epistatic.

242 s are derived for the expected reductions in pairwise neutral diversities caused by both single and r

243 more reliably, and response variability and pairwise noise correlations are reduced during trials in

244 e present a novel, kurtosis-based measure of pairwise non-coding conservation that requires no pre-se

245 d or represented by corresponding equivalent pairwise non-trophic interactions.

246 This effect is not observed for pairwise nor for higher than third-order correlations.

247 The average number of pairwise nucleotide differences among the whole genomes

248 ion by combining two widely used statistics: pairwise nucleotide diversity d(xy) and Patterson's D.

249 ed perceptual similarity estimates of 49,788 pairwise odorants from 199 participants who smelled 242

250 ons for related odours, selectively rewrites pairwise odour relationships, and better matches odour p

251 et of species and show that these changes to pairwise outcomes with temperature are also predictive o

252 dels (p = 0.14), but remained significant in pairwise (p = 0.0003) and survival analyses (p = 0.02).

253 p 1.4 T NMR spectrometer in conjunction with pairwise parahydrogen addition producing proton-hyperpol

254 sites, the SNP analyses revealed significant pairwise population differentiation, suggesting that dif

255 ulation density is an important predictor of pairwise population differentiation, suggesting that the

256 nformation studies using Hi-C are limited to pairwise, population-averaged interactions; therefore un

257 Our multi-condition screen identified 13,764 pairwise PPIs, a threefold increase over PPIs identified

258 Rather than traditional pairwise predator-prey diel comparisons, we considered s

259 Pairwise preference experiments showed a stark contrast

260 However, in pairwise preference experiments with J+ CMV- and J- CMV-

261 However, these methods rely on pairwise proximity ligation and reflect population-level

262 ce through PSF using a meta-analysis of 1038 pairwise PSF measures.

263 ence, partly because of a failure to analyse pairwise PSF, the metric directly linked to plant specie

264 Treatment effects were computed using pairwise random-effects meta-analysis and meta-regressio

265 mes between 2 procedures were compared using pairwise random-effects meta-analysis at 1, 3, and 5-yea

266 Causal analysis of the same pairwise recorded LFPs demonstrated the occurrence of co

267 Here, we use pairwise recordings of spinal neurons to measure synapti

268 we assess the coordination of muscles using pairwise redundancy measured through interaction informa

269 Mean pairwise relatedness among individuals was significant i

270 Here, using a sensitive pairwise replication competition assay, we show that Vpr

271 enerally identify most of the genes found by pairwise resampling (and vastly out-performs ANOVA), but

272 ng cooperativity as the cumulative result of pairwise residue effects.

273 nt background, suggesting that the defect in pairwise SC assembly in hal mutants reflects inappropria

274 on CeO(2) (100), and a factor of two higher pairwise selectivity (6.1 %) in the hydrogenation of pro

275 The average classification accuracy for pairwise separation is 99% with just over 30 samples in

276 Pairwise sequence covariations are a signal of conserved

277 e species radiation, producing a gradient of pairwise sequence divergence termed 'evolutionary strata

278 uter-generated objects (YUFOs) that included pairwise similarity ratings at the beginning, middle, an

279 Analyses of pairwise similarity ratings revealed multiple dissociati

280 es, and edges between two nodes denote their pairwise similarity/distance relationships in the define

281 also provide software implementations for a pairwise single nucleotide variant (SNV) co-occurrence m

282 The minimum pairwise SNP difference between a cattle and human isola

283 ur reference implementation of the described pairwise SNV matrix (Hansel) and greedy haplotype path t

284 ncreased metabolic demands should strengthen pairwise species interactions, which could destabilize f

285 phs where edges between units are defined by pairwise spike dependencies.

286 (given all observations) of the marginal and pairwise state probabilities.

287 we propose a novel network-based scheme for pairwise structural alignment of RNAs.

288 and cat genomes, we conduct six large-scale pairwise synteny alignments and identify evolutionary br

289 specificity of this finding (ANOVA P = 0.02; pairwise t-tests P = 0.03 and P = 0.003, respectively).

290 lve as a fixed nuisance effect with post hoc pairwise testing using Tukey's correction.

291 Here, we examined hundreds of occurrences of pairwise through-space communication between nucleotides

292 r comprehensive screen measures thousands of pairwise trait correlations across hundreds of thousands

293 otypic correlations (rP, below diagonal) and pairwise-trait genetic correlations (rG, above diagonal)

294 corrected to state: "Difference matrices for pairwise-trait phenotypic correlations (rP, below diagon

295 lly, we use machine learning to test whether pairwise trophic interactions can be predicted with accu

296 machine learning to predict probabilities of pairwise trophic interactions with high accuracy.

297 nown process on a multi-qubit processor from pairwise two-qubit tomographic data.

298 We demonstrate, through pairwise within-study comparisons across 49 environmenta

299 raction to the yeast Hanseniaspora uvarum in pairwise yeast feeding assays.

300 Affinity purification and pairwise yeast two-hybrid analysis suggest that ZC3H5 fo