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1 allow for the inclusion of duplicated genes (paralogs).
2 py tends to have more sub-functions than its paralog.
3 onors, a feature only described for the FMO1 paralogs.
4 enes, which may cause them to be mistaken as paralogs.
5 ifferentiate on double knockout of both HNF4 paralogs.
6 vered functional nonequivalence between RUNX paralogs.
7 mber and primary structure of alpha-defensin paralogs.
8 mitochondrial Trap1, the four cellular hsp90 paralogs.
9 which are deficient in two of the four CRWN paralogs.
10 oned cDNA plasmids corresponding to the Defa paralogs.
11 onnected to the core through the Prp42/Prp39 paralogs.
12 riple paralogs, culminating in tens of EXO70 paralogs.
13 res of four functionally distinct plant AAAD paralogs.
14 neofunctionalization of recently duplicated paralogs.
15 ereas active marks are associated with their paralogs.
16 muscle, we searched for additional myospryn paralogs.
17 able and under the modular control of two AR paralogs.
18 ese never-essentials are highly enriched for paralogs.
19 , illustrating the differences between these paralogs.
20 nc fingers that are absent in the other NEIL paralogs.
21 require the system-wide optimization of all paralogs?
23 action analysis distinguishes two classes of paralogs: a more functionally divergent subset and anoth
32 ly identified a nodal role for the caspase-8 paralog and only human pseudo-caspase, FLIP(L), in regul
33 ead, gene duplication with divergence of one paralog and weak positive selection appear to underlie h
36 togenetic mapping of ribosomal genes and Hox paralogs and with microsatellite data, brings a closer l
37 c interactions for a deletion mutant of each paralog, and of trigenic interactions for the double mut
38 nerated data for all gene copies (homeologs, paralogs, and segregating alleles) present in each of th
39 Here, we show that AP2L5 and its related paralog AP2L2 play critical and redundant roles in the s
40 . burtoni possess two androgen receptor (AR) paralogs, ARalpha and ARbeta, providing a unique opportu
45 ount of information that would be ignored if paralogs are discarded, as well as the resulting loss in
46 mortem study confirmed that HDAC1 and HDAC2 paralogs are elevated in white matter tissue from elderl
52 le eIF4E (LeishIF4Es) and eIF4G (LeishIF4Gs) paralogs, as each could be assigned a discrete role duri
54 human p190A, but not its 50% identical p190B paralog, associates with all 13 eIF3 subunits and severa
57 better elucidate the role of BB0405 and its paralog BB0406 during infection and in serum resistance,
58 nization of rodents with BBI39, or a diverse paralog, BBI36, or their combination impaired pathogen a
60 in vivo, CCCTC-binding factor (CTCF) and its paralog brother of the regulator of imprinted sites (BOR
62 he same fold as angiogenin and other RNase A paralogs, but the toxin does not share sequence similari
63 e predictions, and identifying and excluding paralogs by combining tree- and synteny-based approaches
66 way, where the lost-of-fitness effect of one paralog can be compensated only in a subset of lines.
67 trA control, and functional citrate synthase paralogs cannot replace CitA in promoting S-phase entry.
68 ere, we demonstrate that MondoA, but not its paralog carbohydrate-responsive element-binding protein,
69 In the absence of caspase-8, another of its paralogs, caspase-10 (also transcriptionally up-regulate
71 Histone acetyltransferase (HAT) p300 and its paralog CBP acetylate histone lysine side chains and pla
72 subunit composed of cyclin C and one each of paralogs Cdk8/Cdk19, Med12/Med12L, and Med13/Med13L.
73 tor of MPF functions in meiosis and that its paralog, CKS1, must be excluded from the germ line for p
76 f-function variants and missense variants at paralog-conserved sites were enriched in voltage-gated s
79 ns suggest that multiple interacting RNase J paralogs could provide a strategy for functional improvi
80 , PHR-tail interactions are conserved in the paralog CRY2 and reduced when either CRY is bound to the
83 resolving 5'-UTR structures, but whether its paralog, Dbp1, performs similar functions is unknown.
84 ndings expand the concept of SMARCA2/SMARCA4 paralog dependency and suggest that pharmacological inhi
85 missense variants partially or fully rescued paralog dependency, underscoring that careful selection
86 plex genetic interaction analysis with yeast paralogs derived from the whole-genome duplication event
87 ith missense variants in three other DDX/DHX paralogs: DHX16 (four individuals), DDX54 (three individ
89 iology, we observed that activation of these paralogs differs from the voltage- and calcium-gated cha
90 upported by the selective expression of RUNX paralogs during Langerhans cell and inducible regulatory
91 Carboxysome shells contain multiple BMC-H paralogs, each with distinctly conserved residues surrou
92 ity with extrinsic signals, while non-native paralogs enforced differentiation even in the absence of
94 y inference step to account for same-species paralogs evolving at different rates, and (ii) minimizin
95 A pollen-specific depletion of the closest paralog, EXO70C1, using artificial microRNA in the exo70
96 n human term placenta and is the predominant paralog expressed in primary human trophoblast cultures.
98 ane-bound compartments is encoded by several paralog families, including small GTPases, coiled-bundle
100 ed by ELAV, the transcript encoding the ELAV paralog FNE acquires a mini-exon, generating a new prote
102 iphon and the presumably more primitive OCP2 paralog from the same organism, we show that an NTD-CTD
103 e show that genetic redundancy of Gata3 with paralog Gata2 in trophoblast progenitors ensures the suc
105 tion of CHyMErA to the ablation of mammalian paralog gene pairs reveals extensive GIs and uncovers ph
106 ing mouse embryogenesis, the Arpp19 and Ensa paralog genes display specific functions by differential
108 eral recent structures of MraY and its human paralog, GlcNAc-1-P-transferase, have provided insights
110 eticulum (ER)-resident heat shock protein 90 paralog, glucose regulated protein 94 (Grp94), but their
111 and two other Tetrahymena RPA large subunit paralogs had higher DNA binding affinity than their larg
113 indicate that at least some archaeal histone paralogs have evolved to play distinct and conserved fun
114 it has been generally assumed that all Hsp70 paralogs have similar activities and are largely functio
115 ervations indicated that the CELA1 and CELA3 paralogs have some different but also overlapping specif
117 edundantly with an intestine-restricted HNF4 paralog, HNF4G, to activate enhancer chromatin and upreg
119 or SHF of embryos lacking both Hoxb1 and its paralog Hoxa1 results in atrioventricular septal defects
120 HISTONE MONOUBIQUITINATION1 (HUB1) and its paralog HUB2 act in a conserved heterotetrameric complex
121 escent protein-labeled forms of EGFR and its paralog, human epidermal growth factor receptor 2 (HER2/
124 irst evidence that LIN28B is the predominant paralog in human placenta and that decreased LIN28B may
127 ore ATG genes, such as highly divergent ATG8 paralogs in dermatophytes and multiple ATG15 duplication
128 ics simulations, we go on to identify unique paralogs in M. stadtmanae and Methanobrevibacter smithii
131 cture that these capstones, as well as other paralogs in the Methanobacteriales, have been maintained
133 characterize the functions of two Argonaute paralogs in the sea anemone Nematostella vectensis of th
137 agellins, five structural and one regulatory paralog, in Caulobacter crescentus, a monopolarly flagel
139 that compensation among ligand and receptor paralogs is critical for stem cell homeostasis, but that
141 importance, misregulation of RAD51, and its paralogs, is associated with diseases such as cancer and
142 rdless of whether it comes from orthologs or paralogs, is most likely to lead to higher prediction ac
145 -incompatibility locus (S locus) consists of paralogs (Lal2, SCRL) of the canonical Brassicaceae S lo
146 e differences between the two mammalian SAR1 paralogs lead to pronounced biochemical differences that
147 s of independently arising mutations in AAAD paralogs leading to the convergent evolution of the deri
148 ymus, T cell-specific ablation of the Roquin paralogs leads to a dramatic expansion of NKT17 cells, w
149 e found that Lin28b (and its closely related paralog, Lin28a) directly interacted with Igf2bp3, anoth
151 opposite effects, and manipulating Lin28a's paralog, LIN28B caused similar yet distinct phenotypes.
152 ential subunit that combines with any of its paralogs, LRRC8B-E, to form hexameric VRAC complexes.
154 MISTR1(NDUFA4) followed by replacement with paralogs MItochondrial STress Response AntiViral (MISTRA
155 ast cancer, elevated levels of the mammalian paralogs MMP2, MMP9, and MMP13 are associated with a 4-
157 re different, independent functions, the two paralogs must acquire mutations that effectively insulat
160 tandemly duplicated, coexpressed with their paralogs, narrowly expressed at lower levels, less conse
161 heterochromatin-localizing protein like its paralog Oddjob, also an evolutionarily dynamic yet essen
162 as largely sustained by 4CL5, a low-affinity paralog of 4CL1 typically with only minor xylem expressi
163 rferes with the interaction between ARC3 and PARALOG OF ARC6 (PARC6), another key regulator of chloro
165 ility of choline kinase alpha (Chka), a gene paralog of Chkb, to improve dystrophic phenotypes when u
168 ily members in Arabidopsis, FtsZ2-1, a close paralog of FtsZ2-2, and the functionally distinct FtsZ1-
169 that TgSPY, an ortholog of plant SPINDLY and paralog of host OGT, is required for nuclear O-fucosylat
173 r signalling molecule and a well-established paralog of the insect peptide prothoracicotropic hormone
174 Here, we detail the contribution of MCUB, a paralog of the pore-forming subunit MCU, in mtCU regulat
175 to the gene ALBINO4 (ALB4), which encodes a paralog of the well-known thylakoid protein targeting fa
176 n (TNNI1 R37C(+/-)) is in the fetal/neonatal paralog of TnI, a gene thought to be expressed in the he
178 ng XRCC4-like factor (XLF)/Cernunnos and the paralog of XRCC4 and XLF, PAXX nonhomologous end joining
179 IgSF) domains discovered a network formed by paralogs of Beaten Path (Beat) and Sidestep (Side), a li
180 s single-copy CYCLOIDEA-like genes and three paralogs of CINCINNATA (CIN) in early diverging angiospe
182 tiana benthamiana incorporates two different paralogs of each catalytic subunit into active proteasom
183 eins 1 and 2 (FXR1P and FXR2P) are autosomal paralogs of FMRP that are involved in promoting muscle d
185 s japonicus mutants defective in AM-specific paralogs of lipid biosynthesis genes (KASI and GPAT6).
186 europeptide-F (sNPF) have been identified as paralogs of NPY/NPF in vertebrates and protostomes, resp
187 athways and for individual PR genes, such as paralogs of PR1 and PR5, and other factors of the salicy
188 ow that Arabidopsis BSK1 and BSK2, two close paralogs of SSP that are conserved in flowering plants,
189 oteins (Helical Carotenoid Proteins [HCPs]), paralogs of the N-terminal domain of OCP, were described
190 at Nedd4-2 exhibits broad specificity for E2 paralogs of the Ubc4/5 clade to assemble Lys(63)-linked
192 es present in the four genomes were syntenic paralogs (ohnologs) generated by the pre-gamma, gamma an
196 Transcriptional compensation between ligand paralogs operates in tomato, facilitated by an ancient g
198 subunit 1 (eIF2alpha), the SG assembly G3BP paralogs, or release of mRNAs from ribosomes via transla
199 as patient-derived data showed that the two paralogs orchestrated nonoverlapping transcriptional pro
200 anemone phylogeny, we conclude that the two paralogs originated due to a Nematostella-specific dupli
202 nsferases CREB-binding protein (CBP) and its paralog p300 play a critical role in numerous cellular p
203 Genome duplication in eukaryotes created paralog pairs of ribosomal proteins (RPs) that show high
205 buffering among approximately 400 candidate paralog pairs using CRISPR/enCas12a dual-gene knockout s
206 that genes encoding human PDIA1 and its two paralogs PDIA8 and PDIA2 are each flanked by genes encod
207 stitutions per synonymous site (K(s) ) among paralogs, phylogenomic (gene tree) reconciliation, and a
210 stribution of observed relationships between paralogs produced across hundreds of models inferred fro
211 n is partly interchangeable with that of the paralog protein tumor-suppressor candidate 3 (TUSC3) but
212 ng the unique and diverse functions of these paralog proteins in neurodevelopment, excitatory synapti
213 osol, whereas organelle-specific Hsp70/Hsp90 paralogs provide similar protection for mitochondria and
214 Plasmodium vivax merozoite surface protein 1 paralog (PvMSP1P), which has epidermal growth factor (EG
220 e functions for these evolutionary conserved paralogs remain elusive, and their role in clathrin-medi
221 strongly suggest that functionally redundant paralogs represent a targetable set of genetic dependenc
222 nd predicted structural analyses of the nine paralogs revealed that PpFAAH1 to PpFAAH4 were closely r
223 molecular mechanism of the antagonistic gene paralogs RH1 and RH2 in determining anthocyanin leaf mar
227 ites 1 and 2 have resulted in development of paralog-selective inhibitors targeting these sites, but
230 The NAHR site was localized to a 160-kb paralog shared between the LCR22A and -D in seven 22q11D
233 Cells exhibiting loss of SMARCA4 rely on its paralog, SMARCA2, making SMARCA2 an attractive therapeut
234 rent compound and that selectivity is due to paralog-specific differences in ligand pose and ligand-i
243 ion may confer specialized functions, and RP paralog specificity defines a novel means of translation
245 also appear to be robust to the inclusion of paralogs, suggesting a promising way to take full advant
246 we use the two Schizosaccharomyces pombe HP1 paralogs, Swi6 and Chp2, as model systems to compare and
255 antation stage of the mouse embryo, when its paralogs Tet2 and Tet3 are not detectably expressed.
256 of ABHD5 and ABHD4, a functionally distinct paralog that diverged from ABHD5 500 million years ago,
257 sequence corresponds to copy-number-variable paralogs that are absent from the human reference genome
259 s a mutual antagonism between Gli3 and Hox13 paralogs that has important implications for Hox and Gli
262 However, there are known and unknown nuclear paralogs that have fundamentally different genetic prope
263 veal evidence for divergence between B. rapa paralogs that may be driven in part by variation in cons
264 cies that have HP1 proteins possess multiple paralogs that perform non-overlapping roles in vivo.
266 f 72 of 79 core RPs, RACK1 and 2 of the 8 RP paralogs, the stoichiometry of which remained constant a
268 c analysis to shed light on archaeal histone paralogs, their evolutionary history, and capacity to ge
269 mics screen, we identified the TNRC6 protein paralogs, TNRC6B and TNRC6C, as functionally important b
270 domains play unique roles in targeting each paralog to distinct binding sites to regulate transcript
271 ion, however, and the capacity of individual paralogs to assemble into histone-DNA complexes with dis
272 re-based mutational analysis of numerous Epa paralogs to generally determine the role of diverse stru
273 Prior work demonstrates that torsinA and its paralog torsinB have conserved functions at the nuclear
274 al divergence of duplicated TSH beta-subunit paralogs (tshbetaa and tshbetab) in Atlantic salmon.
275 appear to act in opposition to their closest paralog, TSO1, revealing complexity in the gene family t
276 e of the redundant functions of OCRL and its paralog type 2 inositol polyphosphate-5-phosphatase (INP
278 have been reported for these domains in the paralog USP11, a key regulator of DNA double-strand brea
279 that can be assembled from its seven histone paralogs vary substantially in DNA binding affinity and
280 Rab5 GEFs (Muk1 and Vps9) or its three Rab5 paralogs (Vps21/Ypt51, Ypt52, and Ypt53) or overexpressi
281 drug development.IMPORTANCE The Vpr and its paralog Vpx are accessory proteins encoded by different
282 rom resolution crystal structure of the ArnB paralog vWA2, disclosing a complex topology comprising t
284 ariable loops often differ amongst KH domain paralogs, we hypothesize that this is a general mechanis
285 specificity is achieved between the numerous paralogs, we used a combination of structural and comput
287 low-level sequencing noise and mitochondrial paralogs while not impacting variant calling, while comp
288 nome duplication, teleost fish have two ridA paralogs, while other extant vertebrates contain a singl
289 -redundant subcomplex of NuRD protein family paralogs, whose composition we corroborated by affinity
292 Escherichia coli has six osmoprotective paralogs with different numbers of transmembrane helices
294 ility, we targeted the N. benthamiana NbAGO1 paralogs with one sgRNA and also multiplexed two sgRNAs
295 ic and biochemical interactions between ATP7 paralogs with the conserved oligomeric Golgi (COG) compl
296 (a Hox2 ortholog) and zen2 (a divergent Hox3 paralog), with disparate spatial and temporal expression
297 Biochemical and genetic analyses of the paralogs within Sulfolobus islandicus supported the hypo
300 the loss of SFK activity, whereas its T cell paralog ZAP-70 is not capable of this compensation.