ライフサイエンスコーパス: phototrophic

1 symbiotic association between a fungus and a phototrophic alga and/or cyanobacterium, are pioneer col

2 in diverse heterotrophic bacteria, fungi and phototrophic algae not previously known to have this act

3 that depend entirely on bacterial prey; (3) phototrophic algae that depend only on light and inorgan

4 dation-reduction balancing mechanisms during phototrophic anaerobic respiration.

5 d, proliferating more rapidly than their non-phototrophic ancestor or rhodopsin-bearing yeast culture

6 asites that have evolved from a free-living, phototrophic ancestor.

7 mes have already been reduced in free-living phototrophic ancestors of apicomplexan parasites, and su

8 r genes are associated with a broad range of phototrophic and chemotrophic genera.

9 arameter representing proportional mixing of phototrophic and heterotrophic nutritional strategies.

10 trophic cyanobacteria, rhizosolenid diatoms, phototrophic and heterotrophic protists, and photohetero

11 es (OPGs), spherical aggregates comprised of phototrophic and nonphototrophic microorganisms, treat w

12 Purple non-sulphur phototrophic bacteria (PNSB) are excellent models for an

13 oductive microbial ecosystem, including both phototrophic bacteria and eukaryotes, living in a strati

14 evious data-limited phylogenetic analyses of phototrophic bacteria and indicate that the core compone

15 that photosynthetically competent anoxygenic phototrophic bacteria are abundant in the upper open oce

16 The green phototrophic bacteria contain a unique complement of chl

17 Aerobic, anoxygenic, phototrophic bacteria containing bacteriochlorophyll a (

18 The purple phototrophic bacteria elaborate a specialized intracytop

19 ein, whereas plants, cyanobacteria, and some phototrophic bacteria possess an O2-dependent enzyme, th

20 It is known that anoxygenic phototrophic bacteria require the Calvin cycle to accept

21 ng cyclases between cyanobacteria and purple phototrophic bacteria reveals three classes of the O2-de

22 MTA metabolism to ethylene formation in the phototrophic bacteria Rhodospirillum rubrum and Rhodopse

23 The purple phototrophic bacteria synthesize an extensive system of

24 rotective mechanism of likely importance for phototrophic bacteria that encounter light and oxygen.

25 nobacteria are a recently described group of phototrophic bacteria that is a major focus of photosynt

26 The green sulfur bacteria, the Chlorobi, are phototrophic bacteria that oxidize sulfide and deposit e

27 xes, highlighting diverse strategies used by phototrophic bacteria to optimize light-harvesting and e

28 The majority of anoxygenic phototrophic bacteria use BchE, an O2-sensitive [4Fe-4S]

29 on of light and oxygen encountered by purple phototrophic bacteria, but the efficiency of such protec

30 n the electron transport chains of anaerobic phototrophic bacteria.

31 rimary reactions of photosynthesis in purple phototrophic bacteria.

32 the core photosynthetic component in purple phototrophic bacteria.

33 pex taxa are consistent with those of extant phototrophic bacteria; those for a somewhat lower delta(

34 Several phototrophic bacterial clades are thought to have evolve

35 EEU is performed by prevalent phototrophic bacterial genera, but the electron transfer

36 of the thermophilic, filamentous anoxygenic phototrophic bacterium Chloroflexus aurantiacus has been

37 proteins of the green filamentous anoxygenic phototrophic bacterium Chloroflexus aurantiacus.

38 action center (RC) in the thermophilic green phototrophic bacterium Chloroflexus aurantiacus.

39 ons of oxygen limitation, this facultatively phototrophic bacterium forms an intracytoplasmic membran

40 rothrix halophila," a filamentous anoxygenic phototrophic bacterium found in Baja California Sur, Mex

41 The facultative phototrophic bacterium Rhodobacter capsulatus contains o

42 arboxylase/oxygenase (Rubisco) employing the phototrophic bacterium Rhodobacter capsulatus was used t

43 e photosynthetic apparatus in the anoxygenic phototrophic bacterium Rhodobacter sphaeroides 2.4.1.

44 The cytochrome bc(1) complex from the purple phototrophic bacterium Rhodobacter sphaeroides has a sin

45 PpsR from the anoxygenic phototrophic bacterium Rhodobacter sphaeroides has been

46 osynthesis control RNA Z) of the facultative phototrophic bacterium Rhodobacter sphaeroides is induce

47 wth in the presence of 1O2, we show that the phototrophic bacterium Rhodobacter sphaeroides mounts a

48 ve recently established that the facultative phototrophic bacterium Rhodobacter sphaeroides, like the

49 In the purple phototrophic bacterium Rhodobacter sphaeroides, many pro

50 rmine the role of GSH-FDH in the facultative phototrophic bacterium Rhodobacter sphaeroides.

51 tase was purified from the purple non-sulfur phototrophic bacterium Rhodobacter sulfidophilus.

52 anaerobic degradation of p-coumarate by the phototrophic bacterium Rhodopseudomonas palustris and fo

53 This enzyme was purified from the phototrophic bacterium Rhodopseudomonas palustris by seq

54 c electron transport chain during EEU in the phototrophic bacterium Rhodopseudomonas palustris TIE-1.

55 We evolved the anoxygenic phototrophic bacterium Rhodopseudomonas palustris to use

56 ation of benzoate has been described for the phototrophic bacterium Rhodopseudomonas palustris.

57 hbaA, were identified and sequenced from the phototrophic bacterium Rhodopseudomonas palustris.

58 he anaerobic oxidation of CO to CO(2) in the phototrophic bacterium Rhodospirillum rubrum.

59 domonas palustris is a purple, facultatively phototrophic bacterium that uses hydrogen gas as an elec

60 tion center complex (LH1-RC) from the purple phototrophic bacterium Thiorhodovibrio strain 970 exhibi

61 des 2.4.1T is a purple nonsulfur facultative phototrophic bacterium which exhibits remarkable metabol

62 n of benzoate and related compounds from the phototrophic bacterium, Rhodopseudomonas palustris.

63 Ppr from the purple phototrophic bacterium, Rhodospirillum centenum (also kn

64 The purple phototrophic bacterium, Thermochromatium tepidum, contai

65 ive bacteriochlorophyll (BChl)-synthesizing, phototrophic bacterium.

66 sition in solution in the presence of mature phototrophic biofilm in a rotating annular bioreactor.

67 The phototrophic biofilm presents a non-negligible highly la

68 review the various components of some marine phototrophic biofilms and discuss their roles in the sys

69 Phototrophic biofilms are multispecies, self-sustaining

70 the porous ikaite is colonized by endolithic phototrophic biofilms serving as a substrate for grazing

71 In the presence of riboflavin, the phototrophic biomass in the anodic compartment produced

72 en the low yield and high protein content of phototrophic biomass.

73 netic event can result in the acquisition of phototrophic capabilities in an otherwise chemoorganotro

74 ankton (CM), microalgal plankton with innate phototrophic capability coupled with phagotrophy, graze

75 Here we report a red tide of the phototrophic ciliate Mesodinium rubrum located at the ic

76 youngest clades correspond to the widespread phototrophic clades Prochlorococcus, Synechococcus, and

77 We cultivated mixed phototrophic communities in controlled, laboratory-scale

78 to the resilience and affect the fitness of phototrophic communities is not fully understood(2,3).

79 Phototrophic communities of photosynthetic algae or cyan

80 To address this knowledge gap, 3 mixed phototrophic communities sourced from distinct latitudes

81 rocess model or PPM) was developed for mixed phototrophic communities subjected to day/night cycling.

82 e changed with time and structurally similar phototrophic communities were found at the soil surface

83 photogranules' growth occurs with changes in phototrophic community and granular morphology.

84 ssful construction and light regulation of a phototrophic community, enabling H(2) and fatty acid pro

85 ty, while anticyclonic eddies promote a more phototrophic community.

86 ith novel combinations of photosynthetic and phototrophic components that have not yet been described

87 s showed that As(III) oxidation under anoxic phototrophic conditions correlated with transcription of

88 creased 4-fold under mixotrophic compared to phototrophic conditions, contributing to enhanced rigidi

89 viour of tomato leaf under heterotrophic and phototrophic conditions.

90 vented when respiration is impaired or under phototrophic conditions.

91 ommunity members shifted from sulfur cycling phototrophic consortia, to putative sulfate-reducing bac

92 e of riboflavin upon illumination of a mixed phototrophic culture enriched from a freshwater pond at

93 om hot spring mats: the unicellular oxygenic phototrophic cyanobacterium Synechococcus OS-B' (Syn OS-

94 Nanowires produced by the oxygenic phototrophic cyanobacterium Synechocystis PCC6803 and th

95 ime-dependent resource allocation problem of phototrophic diurnal growth and may serve as a general f

96 The distribution of GSH in phototrophic eubacteria indicates that GSH synthesis evo

97 exity before the Mesozoic diversification of phototrophic eukaryotes such as diatoms, coccolithophora

98 ociation between a heterotrophic or possibly phototrophic eukaryotic host and a photosynthetic eukary

99 lysis revealed that FixK regulates anaerobic phototrophic expression of other target genes with FixK

100 he pio operon are essential and specific for phototrophic Fe(II) oxidation in R. palustris TIE-1.

101 This study demonstrates phototrophic Fe(II) oxidation proceeds even in the prese

102 ophic iron oxidation), that is necessary for phototrophic Fe(II) oxidation.

103 Phototrophic Fe(II)-oxidizing bacteria couple the oxidat

104 f this process because, until recently, most phototrophic Fe(II)-oxidizing bacteria have been genetic

105 Here we examine this issue for the phototrophic Fe(II)-oxidizing bacteria Rhodopseudomonas

106 etic and spectroscopic measurements that the phototrophic Fe(II)-oxidizing bacterium Rhodopseudomonas

107 Euglena spp. are phototrophic flagellates with considerable ecological pr

108 Phototrophic Gemmatimonadetes evolved the ability to use

109 rine Synechococcus, the second-most abundant phototrophic group in the marine environment, is partly

110 in the context of a coarse-grained model of phototrophic growth and available data obtained by a com

111 was constructed and found to be incapable of phototrophic growth and impaired in intracytoplasmic mem

112 e CO(2)-anaplerotic pathway is active during phototrophic growth and that isoleucine is mainly synthe

113 ed transcriptomic data enables simulation of phototrophic growth as a single linear programming (LP)

114 We formulate phototrophic growth as an autocatalytic process and solv

115 seq was used to identify genes essential for phototrophic growth by the purple bacterium Rhodopseudom

116 ds to specific metabolic circumstances under phototrophic growth conditions.

117 The cloned ycf5 gene also complements the phototrophic growth deficiency in strain B6 of C. reinha

118 tosynthesis, thereby permitting survival and phototrophic growth during the light period.

119 wild-type level is insufficient for rescuing phototrophic growth impairment of the prrA mutant, where

120 xidation during sulfide-dependent chemo- and phototrophic growth in bacteria.

121 udies regarding the temporal organization of phototrophic growth in Synechocystis PCC 6803 paving the

122 oorganisms, however, the cellular economy of phototrophic growth is still insufficiently understood.

123 While they are crucial for phototrophic growth of cyanobacterial cells, biogenesis

124 a genetic suppressor approach that restored phototrophic growth of mutants originally defective for

125 uctoisomerase, did not significantly inhibit phototrophic growth of the cyanobacterium, nor did it af

126 and pyruvate, can be assimilated during the phototrophic growth of the GSBs, in the presence of CO(2

127 he puhA gene alone was sufficient to restore phototrophic growth provided that recombination occurred

128 oxidoreductase complex IE was essential for phototrophic growth under strictly anaerobic conditions

129 ocation of cellular resources during diurnal phototrophic growth using a genome-scale metabolic recon

130 g an R. sphaeroides regA-deficient mutant to phototrophic growth with restored regulated synthesis of

131 The selected (phototrophic growth) as well as the unselected (holocyto

132 e are either absent or down-regulated during phototrophic growth, implying that the OTCA cycle is not

133 e, modeling predictions indicate that during phototrophic growth, reverse electron flow from the quin

134 these were proteins encoded by subset of the phototrophic growth-essential genes.

135 riven by reduced ferredoxin generated during phototrophic growth.

136 was previously considered indispensable for phototrophic growth.

137 was also enhanced over normal levels during phototrophic growth.

138 sis, that were not known to be essential for phototrophic growth.

139 s essential for light-dependent greening and phototrophic growth.

140 regulated, as was the bop gene, required for phototrophic growth.

141 chlorosomes as light-harvesting antennae for phototrophic growth.

142 gens, whereas the major thiol in the aerobic phototrophic halobacteria is gamma-glutamylcysteine.

143 -gene operon, designated the pio operon (for phototrophic iron oxidation), that is necessary for phot

144 The pioABC operon is required for phototrophic iron oxidative (photoferrotrophic) growth b

145 The existence of a new phototrophic lab strain allows researchers to compare th

146 The spatial organization of the phototrophic layer resembles microbial mats growing on s

147 traditionally been thought to be an ancient phototrophic lineage, genomics has revealed a much great

148 faster growing CO2 fixers, better adapted to phototrophic living in the oligotrophic open ocean-the m

149 survive this event, as evidenced by benthic phototrophic macroalgae of the Songluo Biota preserved i

150 ife strategies arose from a once free-living phototrophic marine alga.

151 however, debate continues over how different phototrophic mechanisms and the bacteria that contain th

152 constructed evolutionary relationships among phototrophic mechanisms based on a phylogeny of core ant

153 There are two types of phototrophic mechanisms in the Bacteria: reaction center

154 s and molecular clock analyses, we show that phototrophic members of the Chloroflexi phylum are not p

155 gineer cellular metabolism; however, GEMs of phototrophic metabolism have been limited by the lack of

156 Our results revealed that phototrophic metabolism in R. palustris is light-limited

157 ll-based photosynthesis is the most familiar phototrophic metabolism, but retinal-based microbial rho

158 Phototrophic metabolism, the capture of light for energy

159 us cyanobacteria become enriched while other phototrophic microbes diminish significantly.

160 ng, and darkness would likely have decimated phototrophic microbes in the shallow water column.

161 within days, encased by a complex biofilm of phototrophic microbes, whose metabolic activity accelera

162 t and bioenergy production, using engineered phototrophic microbial communities.

163 The application of synthetic phototrophic microbial consortia holds promise for susta

164 A) and diel vertical migration of diatoms in phototrophic microbial mats and the underlying sediment

165 Metagenomic data from the phototrophic microbial mats of alkaline siliceous hot sp

166 m, assess the level of sub-optimal growth in phototrophic microbial mats, and elucidate the extent an

167 ed dissolved carbonates establish productive phototrophic microbial mats.

168 Phototrophic microorganisms are promising resources for

169 Phototrophic microorganisms have significant potential a

170 We propose that periphytic phototrophic microorganisms such as algae likely affect

171 lar-weight thiol composition of a variety of phototrophic microorganisms to ascertain how evolution o

172 While this is an expected response among phototrophic microorganisms, the ability of chemotrophic

173 generate reactive intermediates that damage phototrophic microorganisms.

174 iments that have quantified the abundance of phototrophic, mixotrophic, and heterotrophic nanoflagell

175 Phototrophic Mn(II) oxidation had been previously attrib

176 We analyzed different CMAs produced by phototrophic or nitrate-reducing microbial Fe(II) oxidat

177 Glycolipids are mainly found in phototrophic organisms (like plants and cyanobacteria),

178 ion have focused on bacteria and fungi, with phototrophic organisms (phototrophs) being generally ove

179 r, understanding the origin and evolution of phototrophic organisms can be impeded and biased by the

180 Phototrophic organisms exhibit a highly dynamic proteome

181 Phototrophic organisms such as cyanobacteria utilize the

182 Phototrophic organisms such as plants, photosynthetic ba

183 lity of metabolic strategies that evolved in phototrophic organisms under diurnal conditions.

184 ymes for known autotrophic pathways in other phototrophic organisms, including ribulose bisphosphate

185 s with optimized growth sustainability using phototrophic partners.

186 ed a strong influence on the paleoecology of phototrophic plankton in Kusai Lake.

187 Detection of > 7,000 proteins show how phototrophic populations allocate resources to specific

188 lumped pathway metabolic model (denoted the phototrophic process model or PPM) was developed for mix

189 motivation for the development of engineered phototrophic processes for wastewater management.

190 rectly compare the intrinsic growth rates of phototrophic prokaryotes and eukaryotes from the equator

191 In the facultatively phototrophic proteobacterium Rhodobacter sphaeroides, fo

192 senting the 4.6-Mb genome of the facultative phototrophic proteobacterium, Rhodobacter sphaeroides 2.

193 photosynthesis-related genes from an ancient phototrophic proteobacterium.

194 the relative abundance of other consumer and phototrophic protists.

195 In the facultative phototrophic (Ps) bacterium Rhodobacter capsulatus, it i

196 l genes encoding photosynthetic functions in phototrophic purple bacteria are not present in the heli

197 Here, we isolated a phototrophic purple bacteria, Rhodobacter strain CZR27,

198 tathione amide and its perthiol, produced by phototrophic purple sulfur bacteria and apparently invol

199 is an extremely halophilic and alkaliphilic phototrophic purple sulfur bacterium isolated from a hyp

200 ite the fact that heliobacteria are the only phototrophic representatives of the bacterial phylum Fir

201 re pairing fermentative Escherichia coli and phototrophic Rhodopseudomonas palustris.

202 ht reactions of photosynthesis in individual phototrophic species use only a fraction of the solar sp

203 ic models to guide strain selection, pairing phototrophic, sucrose-secreting Synechococcus elongatus

204 xic state with sulfate-reducing bacteria and phototrophic sulfur bacteria.

205 r bacterium (GSB) that is a model system for phototrophic sulfur oxidation.

206 s) originally inoculated with biomass from a phototrophic system at a wastewater treatment plant.

207 photochemical cycling of Fe, suggesting that phototrophic systems continually respond to their combin

208 Diatoms were the only phototrophic taxa consistently overrepresented.

209 tion zone, where communities transition from phototrophic to aphotic processes.

210 Phototrophic unicellular cyanobacteria related to Synech

211 gely bacterial to a predominantly eukaryotic phototrophic world, creating the foundation for the comp