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1 inding activity of D5, the poxvirus helicase-primase.
2 Hence, DnaC controls the access of DnaB by primase.
3 nto the mechanism of nucleotide synthesis by primase.
4 (p180DeltaN-p70) inhibited RNA synthesis by primase.
5 Interestingly, Ctf4 binds only one Pol alpha-primase.
6 t a new primer synthesized downstream by the primase.
7 ific DNA recognition in an archaeoeukaryotic primase.
8 lves interactions of these proteins with DNA primase.
9 ific DNA recognition in an archaeoeukaryotic primase.
10 hat of a functional primer synthesized by T7 primase.
11 interaction of the yeast ortholog pol1 with primase.
12 tacting and sequestering the relaxase-linked primase.
13 d, pre-translocation state competent to bind primase.
14 80 catalytic subunit of DNA polymerase alpha-primase.
15 e interface in the NTD of DnaB that contacts primase.
16 ymerase requires RNA primers produced by DNA primase.
17 on due to impaired binding to both ssDNA and primase.
18 s to elevated RNA primer synthesis by T7 DNA primase.
19 bility of this DNA helicase to interact with primase.
20 ructure of the iron-sulfur cluster domain of primase.
21 occluding this region from interacting with primase.
22 main not found in the archaeal and bacterial primases.
23 and eukaryotes requires the activity of DNA primase, a DNA-dependent RNA polymerase that lays short
24 all organisms depends on the activity of DNA primase, a DNA-dependent RNA polymerase that synthesizes
28 been reported to stimulate the helicase and primase activities of the complex in the presence of ICP
30 nzymes, PrimPol possesses DNA polymerase and primase activities that are important for replication fo
31 expresses full and functional helicase (and primase) activities when bound to a gp61 primase subunit
32 ase activity, it substantially augments both primase activity and primase-to-polymerase switching.
35 additionally report that although PrimPol's primase activity is required to restore wild-type replic
37 r Mn(II) over Mg(II), suggesting that T7 DNA primase activity modulation when bound to Mn(II) is base
39 the discontinuous nature of DNA replication, primase activity on the lagging strand is required throu
40 e N-terminal domain in T7 gp4 contains a DNA primase activity, this function is lost in metazoan mtDN
41 th the second subunit (p180C-p70) stimulated primase activity, whereas the whole catalytically active
47 e (PrimPol; CCDC111), an archaeal-eukaryotic primase (AEP) in eukaryotic cells, is involved in chromo
48 is article focuses on the archaeo-eukaryotic primase (AEP) superfamily, drawing on recently character
49 In eukaryotes, a single archaeo-eukaryotic primase (AEP), DNA primase, is required for the initiati
51 olecule inhibitors of the activity of T7 DNA primase, an ideal model for bacterial primases due to th
52 -stranded DNA de novo, all organisms require primase, an RNA polymerase making short RNA primers whic
53 s predicted to possess an archaeo-eukaryotic primase and a UL52-like zinc finger domain, the role of
54 lication system of bacteriophage T7 both DNA primase and DNA helicase activities are contained within
55 human primosome, a 340-kilodalton complex of primase and DNA polymerase alpha (Polalpha), synthesizes
56 bserve that signal release is independent of primase and does not seem to require a protein trigger a
58 alled "clamp zones." Loading depends on DnaG primase and is probably driven by Okazaki fragment initi
59 ack of crystal structures of the full-length primase and its complexes with substrates in initiation
60 and is consistent with the requirements for primase and ligase activities as well as earlier electro
61 ost recently discovered human DNA polymerase/primase and plays an emerging role in nuclear and mitoch
62 e ability to disrupt the association between primase and pol alpha allowed us to assess the physiolog
64 domains and defining the requirement for its primase and polymerase activities during nuclear DNA rep
68 PrimPol was recently identified as a TLS primase and polymerase involved in DNA damage tolerance.
71 lication proteins, including DnaA, helicase, primase and the clamp loader, TrfA interaction with the
72 ivity in replication and show that Pol alpha-primase and the lagging-strand Pol delta can be re-used
74 nts and binding mode for interactions of DNA primase and thymidylate synthetase (TS) with high and lo
75 l is a recently discovered DNA-dependent DNA primase and translesion synthesis DNA polymerase found i
77 is novel assay should be applicable to other primases and inefficient DNA/RNA polymerases, facilitati
79 rations of DNA polymerase-alpha primase (Pol-primase), and the p58 subunit of Pol-primase associates
81 ed residues within the ATPase, Topoisomerase/Primase, and Winged helix domains, including four that e
84 olymerase and the zinc-finger domains of DNA primase are involved in the stabilization of the priming
85 that the dramatic conformational changes in primase are necessary to accomplish the initiation and t
90 tants A49 and A53 did not interact with UL52 primase as determined by co-immunoprecipitation experime
91 8 of Pol1 abrogates the interaction with the primase, as does mutation to alanine of the invariant am
92 LTA synthases while YvgJ functions as an LTA primase, as indicated by the accumulation of a GroP-Glc(
93 se (Pol-primase), and the p58 subunit of Pol-primase associates with NFIC/CTF1, suggesting that NFI a
96 to assess the physiological significance of primase being tethered to the eukaryotic replisome in th
97 lusters using DNA charge transport regulates primase binding to DNA and illustrates chemistry that ma
98 at occur only on the lagging strand, such as primase binding to DnaB helicase, RNA synthesis, and SS
99 revealed that the N-terminal domain of UL52 primase binds UL5 helicase and the middle domain interac
100 r binds weakly to fork DNA in the absence of primase, but forms a much more stable primosome complex
101 ontrols the ability of DnaB to interact with primase by modifying the conformation of the NTD of DnaB
102 strate that the [4Fe4S] cluster in human DNA primase can make use of this chemistry to coordinate the
107 and biochemical characterization of the DNA primase complex and its subunits from the archaeon Therm
112 es simplex virus 1 (HSV-1) UL5/8/52 helicase-primase complex is required for DNA unwinding at the rep
115 he completed RNA-DNA primer by the Pol alpha/primase complex simplifies current models of primer tran
116 pplementation of such reactions with the DNA primase complex supported lagging strand formation as we
118 itelivir, an inhibitor of the viral helicase-primase complex, exhibits antiviral activity in vitro an
119 e latter findings indicate that the archaeal primase complex, in contrast to the eukaryote homolog, c
120 lished primarily by the DNA polymerase alpha-primase complex, which makes the RNA-DNA primers accessi
122 ocating along DNA and of helicase-polymerase-primase complexes engaging in synthesis of both DNA stra
123 eriophage DNA replication system that primer-primase complexes have a residence time similar to the t
126 ation machinery includes a trimeric helicase-primase composed of helicase (UL5) and primase (UL52) su
129 ically characterized the bacterial-like DnaG primase contained within the hyperthermophilic crenarcha
131 the primase active site using the available primase crystal structure and ranked based on their pred
132 ion of the essential poxvirus virus helicase-primase D5 and show that the active helicase domain of D
134 , which promotes polymerase alpha (polalpha)/primase-dependent fill-in throughout the genome and at t
136 , we demonstrate redundancy of the Pol alpha-primase DNA polymerase activity in replication and show
138 short RNA-DNA hybrid primers synthesized by primase-DNA polymerase alpha (Prim-Pol alpha) are needed
139 and purified the previously uncharacterized primase DnaG from Mycobacterium tuberculosis (Mtb DnaG).
143 amage in a reaction that is dependent on the primase, DnaG, but independent of any of the known repli
145 e mirrored by experiments in yeast cells, as primase does not interact in cell extracts with pol1 tha
150 T7 DNA primase, an ideal model for bacterial primases due to their common structural and functional f
157 rovide notable insight into the mechanism of primase function and are applicable for DNA primases fro
158 O'Brien et al proposed a novel mechanism of primase function based on redox activity of the iron-sul
161 ls transfected with WT ICP8 and the helicase-primase (H/P) complex exhibited punctate nuclear structu
163 zinc-binding domain (ZBD) of prokaryotic DNA primases has been postulated to be crucial for recogniti
164 lthough structures of archaeal and bacterial primases have provided insights into general priming mec
165 ed sites were found within the UL5 (helicase-primase helicase subunit), UL23 (thymidine kinase), UL25
166 nal significance of their interactions using primase, helicase and primer extension assays, and a 'st
167 act with the beta-clamp), in the presence of primase, helicase, Pol III core, clamp loader, and beta-
169 Here we characterize a complex between T7 primase-helicase and DNA polymerase on DNA that was trap
170 Whereas one of the polymerases engages the primase-helicase and RNA primer on the lagging strand of
171 omplex consists of two DNA polymerases and a primase-helicase hexamer that assemble on the DNA templa
175 e long 52 gene (UL52; a component of the DNA primase/helicase complex), bICP4, IEtu2, and the unique
176 ding unique long 52 (UL-52; component of DNA primase/helicase complex), Circ, bICP4, and IEtu2 were s
178 ons in the Polalpha-recruitment and putative primase homology domain in Mcm10/Cdc23 abrogate the ribo
181 , we describe the crystal structure of human primase in heterodimeric form consisting of full-length
183 4-(2-pyridinyl)phenyl ]acetamide, a helicase-primase inhibitor for the treatment of herpes simplex vi
185 ed novel herpes simplex virus (HSV) helicase-primase inhibitor that reduced genital shedding and lesi
188 ons that inhibit this charge transfer hinder primase initiation without affecting primase structure o
190 In eukaryotic and archaeal replication, primase is a heterodimer of two subunits, PriS and PriL.
193 single archaeo-eukaryotic primase (AEP), DNA primase, is required for the initiation and progression
194 of dATP, glycerol, and Tris buffer, the DNA primase isolated from Thermococcus kodakaraensis catalyz
195 n primosome and the C-terminal domain of the primase large subunit (p58C) with bound DNA/RNA duplex.
196 different proteins containing the helicase, primase, leading polymerase and a lagging strand polymer
198 The structures of p48 reveal that eukaryotic primases maintain the conserved catalytic prim fold doma
199 at utilization of cofactors as substrates by primase may influence regulation of replication initiati
202 utagenesis of the zinc-binding domain of DNA primase of bacteriophage T7 using a bacterial homolog fr
203 ive tryptophan residues are dispersed in the primase of bacteriophage T7: Trp-42 in the ZBD and Trp-6
205 two of 12 potential priming sites of the DNA primase of the pRN1 replicon, but nearly all these mutat
206 now be cited demonstrating how the term 'DNA primase' only describes a very narrow subset of these nu
207 olymerase activities resembling those of RNA primases or even canonical RNA-dependent RNA polymerases
208 port through DNA to the [4Fe4S] cluster of a primase p58C construct and a reversible switch in the DN
209 he N-terminal domain of the large subunit of primase (p58N) directly interacts with the C-terminal do
210 support of a functional bacterial-like DnaG primase participating in archaeal DNA replication, we ha
211 onstrated that the presence of a primer, not primase per se, provides the signal that triggers cyclin
213 t low concentrations of DNA polymerase-alpha primase (Pol-primase), and the p58 subunit of Pol-primas
214 RPA-like ssDNA-binding complex, may regulate primase-Pol alpha (PP) activity at telomeres constitutiv
216 lls utilise specialized polymerases from the Primase-Polymerase (Prim-Pol) superfamily to maintain ge
218 a multifunctional replicative enzyme called primase-polymerase (PrimPol) that is capable of directly
219 we report that PrimPol, a recently described primase-polymerase (PrimPol), plays a crucial role in th
221 The CCPol-MP complex is therefore a unique primase-polymerase enzyme unrelated to either known prim
226 ndergo fork reversal in vivo and rely on the primase-polymerase PRIMPOL for repriming, unrestrained r
230 These structures, along with analysis of primase/polymerase activities, provide a plausible mecha
231 ion of these enzymes under a category called primase-polymerases within the wider functional grouping
232 ese findings establish that some replicative primases, previously considered to be solely involved in
233 Here, we report that archaeal replicative primases (Pri S, primase small subunit) can also perform
237 bly, and function of the processive helicase-primase (primosome) component of the bacteriophage T4-co
243 gging-strand polymerases are attached to the primase, ready for Okazaki fragment synthesis in tandem.
244 tations in T7 that suppress the inability of primase reduce the amount of gp5.5 and thus increase the
245 ural differences between bacterial and human primases render the former an excellent target for drug
247 e crystal structure of the full-length human primase, revealing the precise overall organization of t
250 The addition of a single subunit of gp61 primase stabilized the resulting primosome complex at th
253 and primase) activities when bound to a gp61 primase subunit at a helicase:primase subunit ratio of 6
258 A fifth SNV located within UL5 (helicase-primase subunit) greatly reduced in vivo viral replicati
263 the large subunit of eukaryotic and archaeal primases, suggesting that the PhrB-like photolyases bran
266 transcription factor (Mtf1) is an efficient primase that initiates DNA synthesis on ssDNA coated wit
267 synthesis in genomic duplication depends on primase, the DNA-dependent RNA polymerase that synthesiz
268 ulating the activity of DNA polymerase-alpha primase, the only enzyme known to initiate DNA replicati
270 d gp4 lacking the zinc binding domain of the primase; the protein has helicase activity but no DNA-de
272 fork construct prior to the addition of the primase to avoid the formation of metastable DNA-protein
274 s an attractive candidate for serving as the primase to initiate lagging strand DNA synthesis during
275 in atomic detail the mode of association of primase to Pol alpha, the critical interaction that keep
277 and physiological significance of tethering primase to the eukaryotic replisome via pol alpha remain
279 These findings indicate that tethering of primase to the replisome by pol alpha is critical for th
280 s an oligoribonucleotide, synthesized by DNA primase, to initiate the synthesis of an Okazaki fragmen
281 been thought to require a protein, possibly primase, to pry polymerase from incompletely extended DN
283 domains of DNA helicase, five domains of RNA primase, two DNA polymerases, and two thioredoxin (proce
286 is revealed that upon binding Mn(II), T7 DNA primase undergoes conformational changes near the metal
288 DnaB complexed with the C-terminal domain of primase, we found that Ile-85 is located at the interfac
289 ng NADH-quinone reductase subunit A, and DNA primase were expressed in HLA-B27(+) cells, and their HL
290 R screening, fragment molecules that bind T7 primase were identified and then exploited in virtual fi
293 cantly enhances the binding of nucleotide to primase, which correlates with higher catalytic efficien
295 ganisms, DNA replication is initiated by DNA primases, which synthesize primers that are elongated by
296 This direct interaction of a bacterial-like primase with a eukaryotic-like helicase suggests that fo
297 e, as well as the helicase-binding domain of primase with a molar ratio of 6:6:3 at 7.5 A resolution.
298 peptide spanning the last 16 residues binds primase with high affinity, and the equivalent peptide f
300 has replaced PriL as the subunit that endows primase with the unique ability to initiate nucleic acid