ライフサイエンスコーパス: publicly

1 used previously generated data to develop a publicly accessible and user-friendly database to enable

2 r, we cross-referenced the data in all major publicly accessible cancer mutation databases to determi

3 These publicly accessible data can be annotated and updated wi

4 Publicly accessible records are sparse, especially from

5 rent absence of Polynesian representation in publicly accessible reference sequences, rs373863828 or

6 generic, high-resolution, reproducible, and publicly accessible tool, this study presents a wind dam

7 Finally, we have formatted this data as a publicly accessible track hub, enabling researchers to e

8 Vaxign-ML is hosted in a publicly accessible web server and a standalone version

9 atients and in the general population is now publicly accessible.

10 All data is fully open and publicly accessible.

11 er Injury Severity Score, when compared with publicly and privately insured patients.

12 We shared data from two systems publicly and sequestered data from all three systems for

13 these narratives must be captured and shared publicly as an integral part of the scientific process.

14 d the simulated metabolic profiles, are also publicly available (Messa et al., 2020).

15 to promote further innovation, we also make publicly available a large dataset of 10,030 annotated e

16 s the low temporal and spatial resolution of publicly available administrative data such as census da

17 elated or unrelated) and uses for comparison publicly available AFs estimated in a group of healthy s

18 enomics) has more than doubled the number of publicly available analysed datasets held within the res

19 Publicly available and designed for hospital operations

20 Here, we develop PRISMOID, a novel publicly available and free 3D structure database for a

21 ze circadian transcriptome datasets that are publicly available and identify the critical component(s

22 l genes in bladder cancer tumor samples from publicly available and MD Anderson Cancer Center cohorts

23 We make nnU-Net publicly available as an out-of-the-box tool, rendering

24 MEDEA is publicly available as part of our Glossary-GENRE suite f

25 ointsum" implementing the proposed method is publicly available at github.

26 methods (MAPER and FreeSurfer), using three publicly available atlas databases (Hammers_mith, Desika

27 ine bacteria by probing a collection of 1239 publicly available bacterial genomes, representing cultu

28 Here we present MemSTATS, a publicly available benchmark set of both quaternary- and

29 in the usage of and demand for easy-to-use, publicly available bioinformatic tools and services.

30 e literature and is of the largest among the publicly available biomedical concept embeddings to date

31 annotated bird genomes in addition to other publicly available bird genome data which serve as a val

32 This study uses data from the publicly available Centers for Medicare & Medicaid Servi

33 Our publicly available checklist includes 13,634 species (68

34 Based on publicly available ChIP-seq and chromatin accessibility

35 In this study, we aggregated publicly available ChIP-seq data from 469 human DAPs ass

36 ubset of enriched data are processed against publicly available ChIP-Seq data using Model-based Analy

37 formation on TAD boundaries is borrowed from publicly available chromosome conformation capturing ('H

38 le Citrobacter spp. from UPMC and with other publicly available CNSC genomes.

39 nt cohort coupled with in silico analysis of publicly available cohorts, high expression of USP11 was

40 nvironment by analyzing the transcriptome of publicly available cohorts, TCGA and METABRIC.

41 The area deprivation index is a publicly available composite score constructed from soci

42 n on zebrafish pkd2 mutant embryos using two publicly available compound libraries (Spectrum, PKIS) t

43 e evaluated the performance of all currently publicly available computational T cell epitope predicti

44 yet the current state and standardization of publicly available computational tools for these data is

45 -impact functional variants missing from the publicly available cosmopolitan panels could be clinical

46 lly, intensives where local utility data are publicly available could test the spatial proxies used i

47 y-based methods and set the foundation for a publicly available county yield prediction effort that c

48 correlated at the mRNA level across multiple publicly available CRPC datasets.

49 coinfected patient care in LMICs using both publicly available data and data from Village Health Wor

50 highlight the potential use of large-scale, publicly available data and the value of international c

51 of our single-cell RNA sequencing data with publicly available data from genome-wide association stu

52 Using publicly available data from the Allen Brain Institute,

53 We used publicly available data from the Oral Health Module, las

54 h the analysis of fine-grained, abundant and publicly available data of cryptomarkets.

55 We calibrated our model using publicly available data on demographics; HIV prevalence

56 newly generated microarray data on IHs with publicly available data on toxicological transcriptomics

57 This cross-sectional study used the recently publicly available data on US COVID-19 deaths with repor

58 rs that could be in principle estimated from publicly available data once the evolution of the Lighti

59 estimates are finally compared to some other publicly available data regarding anthropogenic [Formula

60 icity hospital network and ChestX-ray14 is a publicly available data set with 112 120 images.

61 Consistent with our bioreactor data, publicly available data sets and patient stool samples s

62 This method was evaluated using 2 publicly available data sets for children <5 y old: BRIN

63 We evaluate our approach with four publicly available data sets from both time-of-flight (T

64 Results from reanalyses of multiple publicly available data sets of human and mouse heart fa

65 -source energy system optimization model and publicly available data sets to examine future electrici

66 Meta-analysis of publicly available data showed increased BOP1 expression

67 lity metric coined "occupancy rate" based on publicly available data to assess differences in postope

68 elective pressure due to stewardship, we use publicly available data to estimate the effect of change

69 ment staff performing wealth screening using publicly available data to identify patients capable of

70 ous published reports and compared them with publicly available data, living epilepsy controls and et

71 Because our methods rely on publicly available data, they could be employed for nati

72 Using publicly available data, we test whether short-paired en

73 e also performed network analyses relying on publicly available data, which supported our key finding

74 utional data; only 16 were validated against publicly available data.

75 nt costs for new therapeutic agents based on publicly available data.

76 Analysis from a publicly available database showed SNX27 to be overexpre

77 VDJbase is a publicly available database that offers easy searching o

78 lyzed; allele frequencies were compared with publicly available database.

79 sources of variation, gene annotation using publicly available databases and gene sets, and data vis

80 ces of these proteins have been deposited in publicly available databases and repositories.

81 Our analysis of publicly available databases of protein complexes indica

82 ensive next generation sequencing has filled publicly available databases such as the Sequence Read A

83 ted gene signatures were used to interrogate publicly available databases to identify upstream signal

84 We trained the proposed model using huge publicly available databases, (CBIS-DDSM, BCDR-01, and I

85 By integrating information from publicly available databases, we curated 883 FDA approve

86 oup and their interacting CSC genes from the publicly available databases.

87 dence on these issues by leveraging a unique publicly available dataset consisting of roughly 30,000

88 A publicly available dataset containing k-space data as we

89 This publicly available dataset includes the cortical activit

90 A publicly available dataset of Zika virus-infected neural

91 s of more than 850 patients with cancer from publicly available datasets and showed that it was able

92 performed extensive numerical simulations on publicly available datasets from diverse domains demonst

93 Large publicly available datasets from well-characterized case

94 sures using extensive simulation studies and publicly available datasets in cancer genomics.

95 The deep neural network was trained on two publicly available datasets including 297,541 images of

96 from healthy individuals were obtained from publicly available datasets matched for country.

97 Experimental tests involving several publicly available datasets of patients afflicted with p

98 -validation methods are implemented on three publicly available datasets to evaluate the performance

99 With publicly available datasets, we designed and trained var

100 s with three example websites generated from publicly available datasets-human neuronal tissue, mouse

101 f SASH1 in non-small cell lung cancers using publicly available datasets.

102 We demonstrate SpatialCPie on several publicly available datasets.

103 These results were further validated using publicly available datasets.

104 published WSH scores based on simulated and publicly available datasets.

105 el the US epidemic at the state-level, using publicly available death data within a Bayesian hierarch

106 2 medical centers to elicit their views on a publicly available decision aid for sacubitril/valsartan

107 ic data for children 0-59 mo of age from all publicly available Demographic and Health Surveys (DHS)

108 We analyzed publicly available esophageal CD3(+) T-cell single-cell

109 pression Atlas Tool (PEATmoss), that unifies publicly available expression data for P. patens and pro

110 d the same computational pipeline to analyze publicly available expression data from postmortem brain

111 nteractome study performed in our lab, (3) a publicly available extracellular vesicles dataset, and (

112 he Ethereum Blockchain, which is the largest publicly available financial data source that has a gran

113 show the results from using TarPan Viewer on publicly available follicular lymphoma, breast cancer, a

114 s at isoform-level and make this information publicly available for all the curated drugs.

115 The R script for our new utility is publicly available for download from the web.

116 The software, including documentation, are publicly available for free download from Github.

117 The hierarchical atlas and code will be made publicly available for future investigators.

118 These data will be made publicly available for replication and future investigat

119 and the code required to run the rules, are publicly available for researchers who wish to annotate

120 Metabolic datasets used in this study are publicly available from the cited sources.

121 nts with ATB across a large, diverse list of publicly available gene expression datasets, and evaluat

122 Using large publicly available genome-wide association studies (GWAS

123 sh distances) between African MAGs and other publicly available genomes from the rumen.

124 cess to over 250 000 uniformly annotated and publicly available genomes with curated metadata.

125 Using publicly available genomes, 4465 high diversity genomic

126 We finally compared transcriptomic data to publicly available genomic datasets for Symbiodiniaceae

127 Geometric Network (MEGENA), were applied on publicly available glioma, control brain and stem cell g

128 Retrospective analysis with publicly available Google trends data from January 1, 20

129 Here, we use publicly available Google Trends data to evaluate whethe

130 use of Bayesian colocalization analysis, of publicly available GWAS summary statistics with the cyto

131 nts a wind damage model that is built around publicly available hazard, exposure, and vulnerability d

132 Publicly available high-dimensional methylation data are

133 Publicly available high-quality corn yield prediction ca

134 Scientists can import their own or publicly available HTS data into LabxDB seq to manage th

135 (BSF) model of "frequent hitters" using 872 publicly available HTS data sets.

136 Using data from two publicly available human genomic diversity resources, we

137 g sequencing reads and aligned them with the publicly available human, chimpanzee, and gorilla Y asse

138 iopsies from a patient with cCD and analyzed publicly available immune cell proteomics data to charac

139 data and methods of this work have been made publicly available in an open-source model.

140 We applied our approach to publicly available in vitro data of treatment with diffe

141 In silico analyses of of publicly available in vitro data showed a decrease of gl

142 propose a complex network framework based on publicly available indicators to extract important insig

143 nvestigators' (PIs) data were extracted from publicly available information from their institutions'

144 Based on publicly available information on genotypes from six mai

145 he associations of density measures from the publicly available Laboratory for Individualized Breast

146 These existent software tools often rely on publicly available lipid databases, such as LIPID MAPS,

147 e records about 10 million peaks called from publicly available m(6)A-seq and MeRIP-seq data using ou

148 It does so by assembling a wealth of publicly available macro- and individual-level data, exp

149 atewide groundwater geochemical database and publicly available maps of soil and aquifer physicochemi

150 We used the publicly available Medicaid Drug Utilization and Current

151 building on the rapidly increasing amount of publicly available metagenome data.

152 Here, by probing thousands of publicly available metagenomes for homologues of methyl-

153 Screening of publicly available metagenomes revealed that Sulfurimona

154 enomes closely related to Yaravirus in 8,535 publicly available metagenomes spanning diverse habitats

155 6,262 identified from a systematic search of publicly available metagenomes, metatranscriptomes and m

156 Using publicly available metagenomes, we evaluated library siz

157 Grabseqs streamlines access to publicly available metagenomic data by providing a singl

158 e identified using co-expression analysis of publicly available microarray data (n = 303 profiles) me

159 By analyzing two publicly available microarray data sets, we found that N

160 Metagenome analysis coupled with publicly available microarray data suggested a mechanism

161 t in a phylogenetic tree consisting of 3,240 publicly available microbial genomes.

162 use molecular dynamics simulations based on publicly available micrococcal nuclease sequencing data

163 We tested our approach on publicly available miRNA expression datasets.

164 g sequence similarity to a large database of publicly available mitochondrial genomes.

165 We use publicly available monthly data from January 2011 throug

166 We independently analyzed 3 publicly available multiethnic DNA methylation data sets

167 G and the general compressor pigz on several publicly available nanopore datasets.

168 ive study examined CNN performance using the publicly available National Institutes of Health chest r

169 We show that a publicly available neural network previously trained in

170 and gestational age in secondary analyses of publicly available Obstetrics and Periodontal Therapy (O

171 types, we provide a user's guide to the five publicly available online data exploration and visualiza

172 emented in C program TS, which is freely and publicly available online.

173 utative cis-regulatory elements (CREs) using publicly available open chromatin data for the heart, ao

174 NASQAR offers a collection of custom and publicly available open-source web applications that mak

175 o date, this is the largest and most diverse publicly available panel of maize NILs to be phenotypica

176 Results are presented using publicly available Parkinson's Progression Markers Initi

177 In the present study, we have made use of publicly available patient expression arrays and have de

178 n an additional cohort of mCRPC patients and publicly available PCa cohorts.

179 le extracellular vesicles dataset, and (4) a publicly available phosphoproteomics dataset.

180 Data were processed using an automated and publicly available pipeline.

181 hydraulic trait distribution maps provide a publicly available platform to fundamentally advance und

182 cial databases, 4 industry news outlets, and publicly available press releases from PE firms or platf

183 sistance-causing genomic modifications using publicly available primary HCC datasets (1,019 samples).

184 eme Gradient Boosting) was compared to three publicly available programs (Vaxign, VaxiJen, and Antige

185 simulation study and via analyses of several publicly available protein expression, microarray gene e

186 predictions based on the output of BIOWIN, a publicly available quantitative structure-biodegradation

187 Given our publicly available R code and data, others can complete

188 n from co-activated CREs, similar cells, and publicly available regulome data to substantially increa

189 the global condition of crop growth based on publicly available remote sensing and meteorological dat

190 he eICU Collaborative Research Database is a publicly available repository of granular data from more

191 As demonstrated by these analyses, this publicly available resource has the potential to serve a

192 CDD) enters its 20th year of operations as a publicly available resource, CDD curation staff continue

193 Online search of publicly available resources conducted from February 16,

194 We describe publicly available resources of molecular, morphological

195 ciation study findings across IMDs and other publicly available resources.

196 We demonstrate this toolkit's performance on publicly available ribosome profiling data by rapidly id

197 s is to the best of our knowledge, the first publicly available RLM prediction model built using high

198 igated the same microglia-related markers in publicly available RNA expression data from postmortem b

199 Publicly available RNA-seq data is routinely used for re

200 Using publicly available samples, we show that the tissue spec

201 Here, we analyse 208 publicly available SARS-CoV-2 genome sequences collected

202 Using publicly available scATAC-seq data, we find patterns tha

203 We demonstrate using publicly available scRNA-seq datasets and simulated expr

204 performance of the proposed method on eight publicly available scRNA-seq datasets with known cell ty

205 mmune cell subtypes is corroborated in other publicly available scRNA-seq datasets.

206 We used 179 publicly available sea star transcriptomes to complement

207 uencing technology, resulting in a wealth of publicly available sequence data but also a gap between

208 A substantial proportion of publicly available sequences is geo-referenced at broad

209 nces were compared with one another and with publicly available sequences.

210 We curated the publicly available sequencing data for 3,393 bacterial i

211 Advanced publicly available sequencing data from large population

212 sequently detected zebrafish picornavirus in publicly available sequencing data from seemingly asympt

213 Here, we re-analyze a publicly available single-cell RNA sequencing (scRNA-seq

214 Here, analyses of publicly available single-cell RNA-Seq sequencing (scRNA

215 Counts are reported by a publicly available software, OsBp_detect.

216 images from other laboratories against other publicly available software.

217 cephalus (iNPH) and 30 normal volumes from a publicly available source.

218 6 RNA-sequencing (RNA-Seq) samples from five publicly available sources representing a range of prost

219 well as vaccination and population data from publicly available sources, to project costs for routine

220 We also retrieved publicly available soybean transcriptome data that were

221 status epilepticus treatment by analyzing 33 publicly available statewide EMS protocols.

222 diversity of major classes of BGCs in 1,110 publicly available Streptomyces genomes.

223 he transmission dynamics of SARS-CoV-2 using publicly available surveillance data and (2) infer estim

224 cle has earned an Open Data Badge for making publicly available the digitally-shareable data necessar

225 All analysis summary results are publicly available through a web-based visual server, an

226 large number of DAP motif and ChIP-seq data publicly available to explore how DAP associations contr

227 We make the data and code used publicly available to facilitate further development of

228 This illustrates how these SEM images, publicly available to the research community, provide an

229 Many publicly available tools able to perform GWAS have been

230 rpreting genomic sequence variants, identify publicly available tools and resources for genomic test

231 Publicly available toxicological studies on wastewaters

232 organisms, we identified candidate genes in publicly available transcriptome data sets obtained with

233 Publicly available transcriptomes and DNA methylomes of

234 We reviewed publicly available transcripts of all DODAC and ODP meet

235 Drugs@FDA, clinicaltrials.gov, MEDLINE, and publicly available U.S. Food and Drug Administration (FD

236 Publicly available whole meta-genome sequencing data fro

237 It is publicly available with an MIT license at github.com/opt

238 Since 311 requests are publicly available with high spatial and temporal resolu

239 hat data from biological samples will become publicly available with standardized metadata.

240 ssifiers and evaluation metrics will be made publicly available with the intention of facilitating gr

241 ral network architectures and two well-known publicly available X-ray image datasets used to diagnose

242 Application to publicly available yeast and human data has showed that

243 areas on 10 individual brains (which we make publicly available).

244 CellPhoneDB v.2.0 is publicly available, both as code and as a user-friendly

245 We argue that a solid, evolving, publicly available, community-controlled foundation for

246 The data generated in this study are publicly available, enabling the replication and re-anal

247 risk, by performing integrative analysis on publicly available, high-throughput gene expression data

248 d that 59% of the metadata collected are not publicly available, highlighting that the availability o

249 It estimates cell type proportions using publicly available, often cross-platform, reference data

250 f results had been submitted and were either publicly available, or undergoing quality control review

251 ased on R Markdown or Jupyter Notebook, with publicly available, reproducible codes and narratives to

252 However, publicly available, streamlined, and reproducible pipeli

253 it age-specific analyses should be routinely publicly available.

254 n be iteratively improved as new data become publicly available.

255 Summary data of the GWASs are freely and publicly available.

256 ode, new dataset, and pre-trained models are publicly available.

257 -disaster insurance data, which is often not publicly available.

258 their de novo assemblies were recently made publicly available.

259 The network and the analysis software are publicly available.

260 and we are able to make haplotype-level data publicly available.

261 data and annotations used in this study are publicly available.

262 er-expanding heterogeneous datasets that are publicly available.

263 e Published Kinase Inhibitor Set (PKIS) is a publicly-available chemogenomic library distributed to m

264 Using a publicly-available data set, we show that BRAID more acc

265 sing select examples from the literature and publicly-available datasets.

266 While there are >2 million publicly-available human microarray gene-expression prof

267 wealth across ~ 20,000 African villages from publicly-available multispectral satellite imagery.

268 o infection), using our software modules and publicly-available software repository.

269 We illustrate MR-BMA by analysing publicly-available summarized data on metabolites to pri

270 A free, publicly-available Web calculator is provided to help in

271 ormula: see text] Additionally, we provide a publicly-available, online tool to aid researchers in an

272 number of $2656$ mature microRNAs have been publicly described for Homo sapiens.

273 he past several decades, historically led by publicly funded academic innovators but in more recent t

274 up results for the Costa Rica Vaccine Trial (publicly funded and initiated before licensure of the HP

275 nting with advanced open angle glaucoma in a publicly funded health service.

276 Publicly funded HPV vaccination of female adolescents be

277 l group B vaccine (4CMenB, Bexsero) into its publicly funded national immunization program at a reduc

278 allow any V4 16S amplicon study to apply the publicly informed properties to increase the statistical

279 traction, a procedure that is highly used by publicly insured or uninsured patients.

280 ants were 51% female, 46% non-White, and 74% publicly insured.

281 tations which are quality checked and shared publicly on the browser the next day.

282 When files are shared publicly or among collaborators with incorrect or missin

283 n visitors to a tropical beach impacted by a publicly owned treatment works (POTW).

284 We publicly release site-frequency data to create the large

285 We publicly release SPOCK for community use.

286 uite of tools-IGoR, OLGA and SONIA-have been publicly released to the community that allow for the in

287 The project generates and publicly releases clinically annotated genomic data on t

288 Publicly reported cases may overrepresent severe cases,

289 DESIGN, SETTING, AND PARTICIPANTS: Publicly reported data on 636 552 clinicians working at

290 This composite measure uses publicly reported data to produce valid, reliable, and s

291 Posttransplant outcome assessments are publicly reported for patient and regulatory use.

292 Publicly reported measures of ambulatory care quality.

293 the reaction from many was to inwardly - or publicly - scream.

294 Publicly shared data from two hospital systems are used

295 to have used public healthcare coverage or a publicly sponsored assistance program to pay for PrEP (1

296 pay for their antiretroviral treatment using publicly sponsored programs.

297 efore January 2007 with US sales reported by publicly traded companies (n = 602 drugs).

298 and plant populations and the performance of publicly traded companies.

299 that the identities of many chemicals remain publicly unknown because they are claimed as confidentia

300 rom infants during cognitive tasks, released publicly with this paper.