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1 cile by anaerobic culture, and performed PCR ribotyping.
2 hat afforded by plasmid profile analysis and ribotyping.
3 cile by anaerobic culture, and performed PCR ribotyping.
4 typed using high-throughput, fluorescent PCR ribotyping.
5 the potential to be an alternative to CE-PCR ribotyping.
6 analysis (MLVA) compared to typing using PCR ribotyping.
7 test using MLVA and in the control using PCR ribotyping.
8 y rate was 90%, yielding 11,294 isolates for ribotyping.
9 ormed by sequencing of the tcdC gene and PCR ribotyping.
10 All C. difficile strains were typed by PCR-ribotyping.
11 iginating from 26 countries were analyzed by ribotyping.
12 consistent with those of both emm typing and ribotyping.
13 staphylococcal (CoNS) isolates identified by ribotyping.
14 g pulsed-field gel electrophoresis (PFGE) or ribotyping.
15 ce typing (using six housekeeping genes) and ribotyping.
16 tergenic consensus (ERIC)-PCR, and automated ribotyping.
17 nal strain, all 90 isolates were analyzed by ribotyping.
18 the results of the Dienes test and those of ribotyping.
19 racterized by serotyping and automated EcoRI ribotyping.
20 ates were typed by polymerase chain reaction ribotyping.
21 pulsed-field gel electrophoresis (PFGE), and ribotyping.
22 olates was further differentiated with PvuII ribotyping.
23 nth period were typed by the Dienes test and ribotyping.
24 ans strains was evaluated by both AP-PCR and ribotyping.
25 que strains as judged by the Dienes test and ribotyping.
26 cible and could be used as an alternative to ribotyping.
28 ds were as follows: PFGE, 99.7%; MEE, 99.4%; ribotyping, 98.8%; MAb serotyping, 75.8%; MAb serotyping
32 monocytogenes isolates were characterized by ribotyping and allelic analysis of the virulence genes h
33 ates were typed by polymerase chain reaction-ribotyping and analyzed for the presence of toxin genes.
37 It was recently reported that both PvuII ribotyping and HinfI/DdeI restriction endonuclease analy
38 rsity within the C. diphtheriae species, and ribotyping and MEE data generally correlated well with e
39 ence in the mean turnaround time between the ribotyping and MLVA typing (13.6 and 5.3 days, respectiv
40 al and geographic diversity, were assayed by ribotyping and multilocus enzyme electrophoresis (MEE).
43 e finding that differences in the results of ribotyping and plasmid analysis change over time suggest
44 was more discriminatory than EcoRI or PvuII ribotyping and provided subtype data with better epidemi
45 stant isolates was investigated by automated ribotyping and pulsed-field gel electrophoresis (PFGE).
56 AT probes was less discriminating than MLST, ribotyping, and enterobacterial repetitive intergenic co
60 E), multilocus enzyme electrophoresis (MEE), ribotyping, and PCR-restriction fragment length polymorp
63 g methods, such as serotyping, phage typing, ribotyping, and pulsed-field gel electrophoresis, can yi
64 olates by multilocus enzyme electrophoresis, ribotyping, and random amplified polymorphic DNA showed
65 Pulsed-field gel electrophoresis (PFGE), ribotyping, and repetitive extragenic palindromic sequen
66 rotyping, pulsed-field restriction analysis, ribotyping, and repetitive-sequence (BOX element) PCR.
67 dilution vancomycin susceptibility testing, ribotyping, and Sanger sequencing of the vancomycin resi
68 Restriction endonuclease analysis (REA), PCR ribotyping, and serogrouping differentiated 11, 4, and 3
69 popular C. difficile-typing technique is PCR ribotyping, and we previously developed methods using fl
73 gree of diversity observed by PFGE, MEE, and ribotyping can be explained by the fact that isolates we
74 four other molecular subtyping methods: MEE, ribotyping (ClaI), random amplified polymorphic DNA assa
75 erior discriminatory performance of the PFGE-ribotyping combination was proven in two ways: (i) by de
77 (intergenic transcribed spacer PCR [ITS-PCR] ribotyping) could distinguish among type strains of the
78 iscrimination [D] = 0.995) than either EcoRI ribotyping (D = 0.950) or AscI or ApaI single-enzyme PFG
81 pulsed-field gel electrophoresis (PFGE), PCR ribotyping, detection of a binary toxin gene, and detect
83 e for identifying polymorphism was PstI-SphI ribotyping, distinguishing a total of 22 patterns, 10 of
85 ntibiotic susceptibility, biochemical tests, ribotyping, genome restriction mapping, and multilocus s
87 fficile typing platform that is based on PCR-ribotyping in conjunction with a semiautomated molecular
92 o were examined by biotyping, PvuII and SmaI ribotyping, IS200 fingerprinting, and pulsed-field gel e
93 ction fragment length polymorphism analysis, ribotyping, IS200 typing, and PCR amplification of the f
94 th three well-established molecular methods (ribotyping, macrorestriction analysis of genomic DNA, an
95 ferences among isolates, and unlike PFGE and ribotyping, microarrays can be used to identify specific
100 of discrimination among isolates than either ribotyping or PFGE, although strain clustering was simil
105 comparison of four molecular typing methods (ribotyping, pulsed-field gel electrophoresis [PFGE], ran
106 unction with other molecular techniques (16S ribotyping, pulsed-field gel electrophoresis, and detect
109 protein A gene sequence typing (slpAST), PCR-ribotyping, restriction endonuclease analysis (REA), mul
110 ethods, including phage typing (PT) (n = 7), ribotyping (RT) (n = 13), and pulsed-field gel electroph
111 ined by multilocus sequence analysis and PCR ribotyping; sequence type 37 (ST37)/ribotype 017 (RT017)
113 presented herein, the combination of REA and ribotyping should provide valuable information in unders
115 ntly provided more discriminatory power than ribotyping, there were examples where the use of ribotyp
116 and seven cat isolates were characterized by ribotyping to determine whether the ribotypes of the cat
117 the restriction endonuclease XbaI, while for ribotyping, two restriction endonucleases (PstI and SphI
118 c DNA, plasmid profiling, protein profiling, ribotyping using 5S, 16S, and 23S rDNA probes, and polym
125 r biotype differentiation; however, PFGE and ribotyping were better (and equal to each other) at disc
126 indistinguishable by the Dienes test and/or ribotyping were characterized further by pulsed-field ge
127 pulsed-field gel electrophoresis (PFGE) and ribotyping, were used to characterize 207 Escherichia co
130 criminatory ability of MLVA was greater than ribotyping, with 85 outbreaks being confirmed by ribotyp
131 es (88.8%) matched patient stool isolates by ribotyping, without significant difference by treatment.