ライフサイエンスコーパス: solenoid

1 y in the vicinity of the fringing field of a solenoid.

2 he location of the linker DNA in the typical solenoid.

3 airpin loops and structural anomalies in the solenoid.

4 eviously achieved value using a conventional solenoid.

5 erred to as FAT, FATC and N-terminal helical solenoid.

6 em to bend to match the concavity of the VLR solenoid.

7 erature bore of an energized superconducting solenoid.

8 n to be performed within the bore of the MCD solenoid.

9 field region as well as in the centre of the solenoid.

10 id subclasses: alpha-, alpha/beta-, and beta-solenoids.

11 volving non-catalytic RING domains and alpha-solenoids.

12 nsporters, which overwhelmingly fold as beta-solenoids.

13 epeats that assemble into two separate alpha-solenoids.

14 In the standard CMP probe (solenoid), 80% of organisms died within 4 h under high-p

15 al hinge-an arrangement of interlocked alpha-solenoids-about which it can bend to adapt to cages of v

16 equipped with a stepper motor driven stage, solenoid-actuated pinch valves, miniaturized peristaltic

17 A milled 6.4 mm solenoid also provided 6.6x the total carbon signal for

18 olds into a relatively complex two-rung beta-solenoid amyloid.

19 To manufacture smaller microcoils, both a solenoid and saddle coil (both with 1 mm O.D., 0.1 mm th

20 s, one located near to the N terminus of the solenoid and the other between the C-terminal juxtamembr

21 BSol) and forms contacts with the junctional solenoid and the shell-core linker of RyR1.

22 ovalent salt conditions using both one-start solenoid and two-start zigzag starting configurations.

23 ation of complex 3D volume microcoils (i.e., solenoids and saddle coils).

24 The age of onset in certain domains (core solenoid) and subdomains (core solenoid[exEF-hand], chan

25 The p115 structures show a novel alpha-solenoid architecture constructed of 12 armadillo-like,

26 Rsu-1 displays an arc-shaped solenoid architecture, with eight LRRs shielded by N- an

27 1 angstroms reveals a large horseshoe-shaped solenoid assembled from 23 leucine-rich repeats (LRRs).

28 Patients with variants in the core solenoid at the domain level, and the core solenoid (exE

29 Moreover, a solenoid-based eyelid is connected to the pupillary ligh

30 We also constructed beta-solenoid-based insulin fibril models and conducted fiber

31 ure pulse in the sample line by means of the solenoid-based micropump.

32 iserum OC) or antiparallel beta-sheets, beta-solenoids, beta-barrels, and beta-cylindrins (recognized

33 ical mammalian BDCPs share a predicted alpha-solenoid-beta propeller structure, suggesting they have

34 )-free apo-S100A1 binds beneath the bridging solenoid (BSol) and forms contacts with the junctional s

35 Moreover, solenoids can be degenerated and widely vary in the numb

36 linical-grade microcatheter prototype with a solenoid coil at the distal tip was deflected with a foo

37 the use of a large-diameter radio frequency solenoid coil that permits substantially larger sample v

38 )H/(13)C resonance NMR probe consisting of a solenoid coil with a less than 100 nL sensitive region.

39 c circuit model of a CPMAS probe head with a solenoid coil, describing the detuning resulting from th

40 al lobe blocks in a 7T human scanner using a solenoid coil.

41 electromagnetic fields (EMFs) in an air-core solenoid coil.

42 oduce measured PNS thresholds of two leg/arm solenoid coils with good agreement.

43 1.4 cm), medium (4.5 cm), and small (1.5 cm) solenoid coils with varying diameters, with each connect

44 ent an irregular folding of an alpha-helical solenoid composed of HEAT-like repeats.

45 KBP uses its alpha-solenoid concave face and edge loops to bind the kinesin

46 nd that beta-endorphin fibrils are in a beta-solenoid conformation that is generally reminiscent of o

47 nd that beta-endorphin fibrils are in a beta-solenoid conformation with a protonated glutamate residu

48 structure reveals a triangular beta-helical (solenoid) conformation with conserved residues forming t

49 Data Bank led to a 71% increase in detected solenoid-containing entries compared to the gold-standar

50 atrices, enabling accurate identification of solenoid-containing regions.

51 inner groove spanning the entire ANK repeat solenoid contains multiple target binding sites capable

52 Hall sensor mounted to the distal end of the solenoid core.

53 reveals a unique irregular triple-layer beta solenoid cross-beta fibril composed of a single protofil

54 date, all CMP-NMR probes have been based on solenoid designs, which can lead to problematic sample h

55 ture prediction suggest that structure-based solenoid detection methods are preferable to sequence-ba

56 h enucleated eyes that utilizes a high-speed solenoid device suitable for creating military-relevant

57 a 28 nm long rod comprising a central alpha-solenoid dimer capped by two beta-propeller domains at e

58 Our findings indicate that the Raptor alpha-solenoid directly detects the nucleotide state of RagA w

59 Nup84 forms a U-shaped alpha-helical solenoid domain, topologically similar to two other memb

60 tate repeat units of the Leucine Rich Repeat solenoid domain.

61 A drawn glass microinjector and solenoid-driven dispenser are utilized to array picolite

62 on as a means to create a soft, elastomeric, solenoid-driven pump (ESP).

63 e solenoid at the domain level, and the core solenoid (exEF-hand) and channel pore at the subdomain l

64 domains (core solenoid) and subdomains (core solenoid[exEF-hand], channel pore) tended to be lower co

65 or homogeneous (seeded with infectious beta-solenoid fibrils) fibrillization.

66 e chirality of the molecule (which induces a solenoid field), and spin-transfer torque at the molecul

67 eals that the TcdB CROP domain adopts a beta-solenoid fold consisting of long and short repeats and t

68 dies and bioinformatics shows that the alpha-solenoid fold extends the full length of VPS35, and that

69 dynamics predict a tightly wound left-handed solenoid fold in which the cysteines form a disulfide co

70 It reveals a compressed beta-solenoid fold in which the top and bottom sheets are hel

71 % sequence identity, have nearly identical B-solenoid folds but lack cross-seeding ability in vivo, i

72 roteins are predicted to have toroidal alpha-solenoid folds composed of 9-11 proteasome/cyclosome rep

73 ld group containing beta-propeller and alpha-solenoid folds, and the peripheral FG group containing p

74 ts of the insulin amyloid fibrils using beta-solenoid folds, namely, the beta-helix and beta-roll.

75 cluding an N-terminal S-shaped alpha-helical solenoid followed by a coiled-coil oligomerization eleme

76 diation source, with cooling effected with a solenoid-gated compressed air source.

77 o have a beta-solenoidal structure; the beta-solenoid has the cross-beta structure characteristic of

78 acteristic for strongly curved alpha-helical solenoids has been constructed and was found to match pr

79 PR65 is the two-layered (alpha-alpha solenoid) HEAT-repeat (Huntingtin, elongation factor 3,

80 hought to be a predominant HEAT repeat alpha-solenoid, implying a role as a facilitator of macromolec

81 concave face of the Toll leucine-rich repeat solenoid in an area delineated by N-linked glycans and i

82 a-endorphin amyloid, every layer of the beta-solenoid is composed of a single peptide and protonated

83 The solenoid is reinforced by intrachain hydrogen bonds, sid

84 lathrin an arrangement of three curved alpha-solenoid legs radiating from a common center, and COPI s

85 Leucine Rich Repeat (LRR) domains and other solenoids like proteins, we show that the automated anal

86 LH condense into zigzag structures and that solenoid-like features are viable only for longer NRLs (

87 Rpn6 consists of an alpha-solenoid-like fold and a proteasome COP9/signalosome eIF

88 a mechanism for the formation of the wrapped solenoid-like segrosome superstructure.

89 Next, the regions of the solenoid-like TRN-SR2 molecule that are involved in the

90 ength of a flexible core tube by a series of solenoids made of thin conductive wire.

91 ng large and expensive spectrometers such as solenoid magnets.

92 ing and being equipped with a radiofrequency solenoid microcoil, it only requires tiny quantities of

93 on is largely consistent with that of a beta-solenoid model previously determined by solid-state NMR.

94 The results support the alpha-solenoid model, except that they indicate that the repea

95 the type of linker DNA bending that defines solenoid models may be simultaneously present in a struc

96 solenoid, the packing of nucleosomes in the solenoid must be highly constrained.

97 in at the C-terminal end of the central beta-solenoid of the INP is crucial for multimerization.

98 a single NRBF2 MIT domain bends the helical solenoid of the VPS15 scaffold, displaces the protein ki

99 shown that at low pH, it forms either a beta-solenoid or a stacked beta-sheet structure, depending on

100 ealing an extensive network of alpha-helical solenoids organized into a diamond ring conformation and

101 y of helical HEAT-like repeats, which form a solenoid perfectly shaped to accommodate a DNA duplex on

102 ectromagnetic field, supplied by a wire coil solenoid placed underneath the sample plate.

103 Rpn10 attaches to the central solenoid portion of Rpn1, although this association is s

104 ucleate the formation of the infectious beta-solenoid prions in a process of heterogeneous seeding, b

105 le irregularities of repeat lengths in three solenoid protein families.

106 nsile strength (UTS) for two engineered beta-solenoid protein mutant fibril structures (spruce budwor

107 database, significantly expanding the known solenoid protein repertoire.

108 ovides a fast and accurate tool to recognize solenoid protein structures as a whole and to identify i

109 ing for precise identification of repeats in solenoid protein structures, an important subgroup of pe

110 The alpha-helical solenoid proteins adopt a variety of elongated curved st

111 Solenoid proteins are emerging as a protein class with p

112 Containing repeating structural units, solenoid proteins are expected to share sequence similar

113 Solenoid proteins feature prominently in these pathways.

114 proach to recognize solenoid repeats and non-solenoid proteins using stationary wavelet packet transf

115 Solenoid proteins, a subset of tandem repeat proteins, h

116 ed on the pentapeptide repeat family of beta-solenoid proteins.

117 cs features that capture repeating motifs of solenoid proteins.

118 del for PolyQKd-33 and a model with two beta-solenoid protofibrils for PolyQKd-32.

119 le plumbing design, using a small, low-power solenoid pump and valve, avoids the need for quantitativ

120 kg x soln(-1), n = 242), using low-precision solenoid pumps to introduce sample and titrant.

121 Several WPT3 (11.1kVA) solenoid receiver (SR) designs were presented and analyz

122 deep design analysis for the proposed Hollow Solenoid receiver is presented to define the optimum des

123 proposes a new receiver design named Hollow Solenoid receiver that is compatible with the standard d

124 dicted secondary structures containing alpha-solenoids related to those of clathrin heavy chain and C

125 e methods to design a series of closed alpha-solenoid repeat structures (alpha-toroids) in which the

126 ctures as a whole and to identify individual solenoid repeat units from a structure.

127 icle, we propose a new approach to recognize solenoid repeats and non-solenoid proteins using station

128 Recently, several solenoid repeats detection methods have been proposed, s

129 f ConSole analysis, we show how detection of solenoid repeats in structures can be used to improve se

130 essfully designed and validated closed alpha-solenoid repeats with a left-handed helical architecture

131 deep-learning-based pipeline for predicting solenoid residues in protein structures.

132 solic assembly is built on an extended alpha-solenoid scaffold connecting key regulatory domains to t

133 structure of human UBR5, revealing an alpha-solenoid scaffold with numerous protein-protein interact

134 h paired EF-hands originating from the alpha-solenoid scaffold, suggesting a mechanism for channel ga

135 , and proteins with beta-propeller and alpha-solenoid secondary structures.

136 wn stretching and twisting within individual solenoid segments and loosens DNA-end binding.

137 ures that can capture hidden components from solenoid sequence similarities and distinguish them from

138 (50% transmission) and tuneable dual pulsed solenoid setup to generate a homogeneous (laterally and

139 HUWE1 forms an alpha solenoid-shaped assembly with a central pore decorated w

140 face to form a large segrosome with an open, solenoid-shaped structure, suggesting a mechanism for Pa

141 ur simulations, we find clear evidence for a solenoid-shaped transition state and a curl intermediate

142 bute extensive hydrogen-bonding networks for solenoid stabilization.

143 o Raphael, the only other publicly available solenoid structure detection tool.

144 hat Ran-GTP, but not Ran-GDP, constrains the solenoid structure of importin beta, closing high-affini

145 the leucine-rich repeat concave side of the solenoid structure of NgR.

146 are two loops that protrude from the central solenoid structure of the protein.

147 he concave surface of the LRR modules of the solenoid structure where three key hydrophilic residues,

148 of these features for the formation of beta-solenoid structure, as well as the cumulative effects of

149 o allow assembly of an extended superhelical solenoid structure.

150 rate 35-amino-acid motif which form an alpha-solenoid structure.

151 shows that it folds into a classical curved solenoid structure.

152 tate NMR to be assemblies of a two-rung beta-solenoid structure.

153 chromatin, while non-compact structures and solenoid structures are consistent with open chromatin.

154 Given that solenoid structures are more conserved than their sequen

155 FAT and kinase domains (FATKINs) along with solenoid structures made of HEAT repeats.

156 ns-accurate identification and annotation of solenoid structures remain challenging.

157 SOLeNNoID covers all three solenoid subclasses: alpha-, alpha/beta-, and beta-solen

158 ctural designs such as prisms, propellers, 2-solenoid, super-roll, clam, trefoil and box are not wide

159 asic framework of TLRs is a horseshoe-shaped solenoid that contains an extensive beta-sheet on its co

160 eptide repeat-containing, right-handed alpha-solenoid that sequesters the kinesin motor domain's tubu

161 rface located in the kink regions of the two solenoids that is reinforced by additional interactions

162 orseshoe-shaped, right-handed, alpha-helical solenoid, the concave face of which completely covers th

163 nd yet forms apparently 'normal' elements of solenoid, the packing of nucleosomes in the solenoid mus

164 th a groove on the surface of the ANK repeat solenoid, thereby regulating the affinities between anky

165 The tandem N-terminal helical solenoid tightly packs against the FAT and kinase domain

166 e plug has been 7-10 times the length of the solenoid to avoid line broadening from volume magnetic s

167 For solenoids, to predict charged particle trajectories, acc

168 The structure reveals a bent solenoid typical of leucine-rich repeat proteins with an

169 xpiratory-phase TGI was established, using a solenoid valve activated by the ventilator.

170 hanism employing two-beam refraction and one solenoid valve was developed and found to successfully g

171 , thermal conductivity methane sensor, and a solenoid valve.

172 utlet was performed by switching a couple of solenoid valves at branched outlets according to signals

173 y modulation experiments are performed using solenoid valves to introduce concentration plugs of a ma

174 nsive components (i.e., peristaltic pump and solenoid valves), which are discretely computer-operated

175 liquid dispenser equipped with pressure-fed solenoid valves, enabling 50-nL volumes of column efflue

176 ) in one shot, while the radiofrequency (RF) solenoid was constructed using conventional materials av

177 in a (13)C-labeled algae extract, while the solenoid was further tested on two copepod egg sacs (~4

178 n vitro that are probably several turns of a solenoid with about six nucleosomes per turn.

179 Magnetic tweezers based on a solenoid with an iron alloy core are widely used to appl

180 s of Tor form a HEAT repeat-containing alpha-solenoid with four distinct segments: a highly curved 80

181 odel, which envisages axial stacking of beta-solenoids with two coils per subunit, we examined fibril

182 A solenoid, wound along the entire transfer path ensures a