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1 metabolism (RNA helicases, PRP19, p54(nrb), splicing factors).
2 a U1 small nuclear ribonucleoprotein (snRNP) splicing factor.
3 (TDP-43) is a transcriptional repressor and splicing factor.
4 e proper subnuclear storage of an SR protein splicing factor.
5 clear speckles, where it targets a cell mRNA splicing factor.
6 pre-mRNA splicing by lysine methylation of a splicing factor.
7 ed with the expression of DDX39A, encoding a splicing factor.
8 to each peak, including known and candidate splicing factors.
9 ng the RNA-binding preferences of individual splicing factors.
10 atively few genes and typically focus on RNA splicing factors.
11 gonism between CELF2 and the RBFOX family of splicing factors.
12 eme among MDS-relevant mutations of pre-mRNA splicing factors.
13 tion and is a frequent target of alternative splicing factors.
14 ts, and contribute to the timely eviction of splicing factors.
15 emodellers, microRNA-processing proteins and splicing factors.
16 odifications are balanced in these essential splicing factors.
17 y 'hotspots' of the SF3B1 and U2AF1 pre-mRNA splicing factors.
18 SR) proteins are essential nucleus-localized splicing factors.
19 difications and changes in the expression of splicing factors.
20 a ternary complex with U2AF(65) and U2AF(35) splicing factors.
21 ding of shuttling dynamics of Arabidopsis SR splicing factors.
22 ts UHM domain and ULM motifs in constitutive splicing factors.
23 , likely through modulating accessibility of splicing factors.
24 splicing program with sequence specific NOVA splicing factors.
25 proteins, thus functionally inactivating the splicing factors.
26 viral RNA cis elements and host trans-acting splicing factors.
27 HM domains from alternative and constitutive splicing factors.
28 spliceosomes in collaboration with numerous splicing factors.
29 er elements, as well as in genes that encode splicing factors.
30 i.e., protein-protein interactions with key splicing factors.
31 cularly in genes encoding RNA processing and splicing factors.
32 ed by both intronic repeats and trans-acting splicing factors.
33 s-sense mutations of genes encoding pre-mRNA splicing factors.
34 ations in splice regulatory sites or altered splicing factors.
35 rporated into condensates that are formed by splicing factors.
36 by other RNA-binding proteins, particularly splicing factors.
37 requires study of snRNAs, as well as protein splicing factors.
39 that are reduced by dietary restriction via splicing factor 1 (SFA-1; the C. elegans homologue of SF
41 ess a mutated allele of serine/arginine-rich splicing factor 2 (Srsf2(P95H))-which commonly occurs in
44 h high affinity to serine- and arginine-rich splicing factor 2 (SRSF2), a crucial protein in exon def
45 ntain binding sites for serine/arginine-rich splicing factor 2 (SRSF2), and SRSF2 knockdown lowered l
46 We recently described serine/arginine-rich splicing factor 3 (SRSF3 or SRp20) being a proto-oncogen
48 te-specific deletion of serine/arginine-rich splicing factor 3 (SRSF3) impairs hepatocyte maturation
50 or splicing factor, serine and arginine rich splicing factor 3 (SRSF3), was frequently upregulated in
52 dentify the same hotspot somatic mutation in splicing factor 3 subunit B1 (SF3B1(R625H)) in 19.8% of
54 HCC (BCLC B/C) showed higher frequencies of splicing factor 3b subunit 1 (SF3B1) (P = 0.0003), TP53
55 ons in spliceosome components, including the splicing factor 3b subunit 1 (SF3B1), are associated wit
56 s currently the most potent modulator of the splicing factor 3b subunit 1 and used by dozens of resea
58 we show that FANCI and FANCD2 associate with splicing factor 3B1 (SF3B1), a key spliceosomal protein
59 ere we report a protein related to the human splicing factor 45 (SPF45) named splicing factor for phy
61 MLs) and identify new recurrent mutations in splicing factors (5/12 AMLs in SF3B1 and 2/12 AMLs in U2
62 tion of DHX38, encoding an USP39-interacting splicing factor, also reduces the viability of these cel
64 ion with a reovirus strain that targets this splicing factor alters splicing of cell mRNAs involved i
65 t DARPP-32 regulates the expression of SRp20 splicing factor and co-exists with it in the same protei
66 in RBFOX2 in DM1 heart tissue-due to altered splicing factor and microRNA activities-induces cardiac
67 function as a signal responsive trans-acting splicing factor and scaffold that recruits and stabilize
68 e first evidence of viral antagonism of this splicing factor and suggest that downstream consequences
69 efect is directly linked to the SC35 (SRSF2) splicing factor and to the presence of nuclear aggregate
71 I (RNAPII) elongation and the recruitment of splicing factors and adaptor proteins to chromatin compo
72 was found between gene expression changes in splicing factors and alternative spicing of other genes
73 d interaction with serine-arginine rich (SR) splicing factors and appearance of nuclear speckle-local
75 f the test substrate promoted recruitment of splicing factors and consequent pre-mRNA structural remo
76 egulation by viral RNA cis elements and host splicing factors and offers potential therapeutic target
77 enous human cohesin interactome and identify splicing factors and RBPs as functionally significant co
80 GSK-3-dependent phosphorylation of multiple splicing factors and regulators of RNA biosynthesis as w
82 here remains much to be understood about the splicing factors and the cis sequence elements controlli
84 ers of TNPO3, including SR domain-containing splicing factors and tRNAs that reenter the nucleus.
85 ith other U2AF ligand motif (ULM)-containing splicing factors, and further established that SF3b1 ass
86 ates with precursor messenger RNA (pre-mRNA) splicing factors, and inactivation of RBM39 by indisulam
87 tes of splicing-associated histone marks and splicing factors, and thereby unexpectedly could modulat
88 n rates, (ii) binding to pre-mRNA to recruit splicing factors, and/or (iii) blocking the association
89 bunits, CFIm, CPSF, and CstF; lack essential splicing factors; and associate with transcription elong
90 liceosomal proteins and accessory regulatory splicing factors are among the most common targets of so
91 t super-enhancers(7,8), and large numbers of splicing factors are concentrated in nuclear speckles, s
92 ontrast to their GMAS targets, the predicted splicing factors are more conserved than expected, sugge
96 d identify USP39, which encodes an essential splicing factor, as a critical gene for the viability of
98 response induced by driver mutations of key splicing factors associated with myelodysplastic syndrom
99 ssion of relevant spliceosome components and splicing factors (at mRNA and protein levels) in well ch
102 ogate the detrimental sequestration of MBNL1 splicing factor by nuclear RNA foci and consequently MBN
103 report the engineering of CRISPR Artificial Splicing Factors (CASFx) based on RNA-targeting CRISPR-C
104 Here we demonstrate that expression of the splicing factor CELF2 (CUGBP, Elav-like family member 2)
106 report that SON, previously known as an RNA splicing factor, controls MLL complex-mediated transcrip
107 d CCA1 intron in vitro, suggesting that this splicing factor could be involved in regulation of intro
108 KI-7 expression is tightly controlled by RNA splicing factors CUG-BP and hnRNPM through direct bindin
109 n between its central protein, eIF4AIII, and splicing factor CWC22, we found that eIF4AIII and the ot
110 ugh interaction with SRSF3, a host oncogenic splicing factor differentially expressed in epithelial c
111 rovide functional evidence that mutations in splicing factors drive myeloid malignancy development, a
114 ed that mice lacking the epithelial-specific splicing factor Esrp1 have fully penetrant bilateral cle
115 ining non-coding mutations in well-known RNA splicing factors exhibit similar gene expression signatu
116 om patients and controls, we identified four splicing factors exhibiting significantly altered expres
117 suggest that age-associated dysregulation of splicing factor expression and cellular senescence may d
118 ine/Threonine kinase inhibitor SH-6 restored splicing factor expression and reversed both hormone sta
120 tream targets of the ERK and AKT pathways on splicing factor expression, cellular senescence, and pro
121 AKT and ERK pathways led to up-regulation of splicing factor expression, reduction in senescent cell
122 Recently, we identified a factor called SPLICING FACTOR FOR PHYTOCHROME SIGNALING (SFPS) that di
123 o the human splicing factor 45 (SPF45) named splicing factor for phytochrome signaling (SFPS), which
124 DAMAGE REPAIR/TOLERATION PROTEIN111 (DRT111)/SPLICING FACTOR FOR PHYTOCHROME SIGNALING is a splicing
125 nerally thought to activate the SR family of splicing factors for efficient splice-site recognition,
126 pecific cargoes such as serine/arginine-rich splicing factors from the cytoplasm to the nucleus.
127 e isoform of the pan-eukaryotic Srrm2/SRm300 splicing factor gene, and subsequently became fixed in t
132 iates with GGGGCC repeat RNA in vitro is the splicing factor hnRNP H, and that this interaction is li
133 n the E6 ORF through interaction with a host splicing factor, hnRNP A1, and regulates E6 and E7 expre
135 dulation impacts on endogenous expression of splicing factors (HNRNPF and HNRNPH1) and on AS of MS-as
136 genome stability proteins, we find that the splicing factor Hsh155 disassembles from its partners an
138 rnative splicing but also revealed how these splicing factors impact functional properties of the hea
139 cing factor 45 kDa (SPF45) is an alternative splicing factor implicated in breast and lung cancers, a
140 the most frequently mutated gene encoding a splicing factor in a variety of hematologic malignancies
147 vered recurrent somatic mutations within RNA splicing factors, including SF3B1, SRSF2, U2AF1 and ZRSR
150 17 (bZIP17), and the membrane-associated RNA splicing factor, INOSITOL REQUIRING ENZYME1 (IRE1).
151 on for splice sites and that combinations of splicing factors interact at cis regulatory sites on pre
152 n of serine/arginine rich (SR) proteins, the splicing factors involved in the production of FN isofor
154 r of the serine/arginine-rich (SR) family of splicing factors, is one of the mutation targets associa
155 migration indicated that SRPK1, encoding the splicing factor kinase SRSF protein kinase 1, is relevan
157 ide insight into how the loss of a subset of splicing factors leads to a failure of centriole duplica
158 ide screen revealed that depletion of 14 RNA splicing factors leads to a specific defect in centriole
161 NA co-localizes with and sequesters the mRNA-splicing factor MBNL1, leading to missplicing of essenti
162 Here we demonstrate that the RNA alternative splicing factor MBNL1, which is sequestered in nuclear R
164 CLIP-seq/RIP-seq datasets involving numerous splicing factors, microRNAs and m6A RNA methylation.
165 condensation, speckle enlargement, decreased splicing factor mobility, and defective mRNA export.
166 lter the strongest consensus position of the splicing factor motif, except the more than 100 GMAS SNV
167 utant alleles of nab2 and genes encoding the splicing factor, MUD2, and the RNA exosome, RRP6, with i
168 erize genome instability phenotypes in yeast splicing factor mutants and find that mitotic defects, a
169 everal mRNA isoforms promoted by the various splicing factor mutants comprise a premature termination
172 an emphasis on the clinical consequences of splicing factor mutations, mechanistic insights from ani
175 model gene, we show the coordination of the splicing factors NOVA1 and PTBP1 in cancer by regulating
178 heterodimer of the U2AF1 and U2AF2 pre-mRNA splicing factors nucleates spliceosome assembly at polyp
179 ults indicate that the SLO3 PPR protein is a splicing factor of nad7 intron 2 in Arabidopsis mitochon
180 ascribe a mechanistic function to individual splicing factors or even to discern which are critical f
182 exes, which serve as cis-elements to recruit splicing factors, play a critical role in regulating alt
184 SCs, and its processing is suppressed by the splicing factor PPIE, which is highly expressed in mESCs
185 nd that it binds with higher affinity to the splicing factor pre-mRNA-processing factor39-1 (PpPRP39-
186 LICING FACTOR FOR PHYTOCHROME SIGNALING is a splicing factor previously shown to interact with phytoc
187 e top candidates include three host proteins splicing factor proline and glutamine rich (SFPQ), non-P
191 responsible for increased expression of the splicing factor PTBP1 (polypyrimidine tract binding prot
192 oreover, follow-up molecular analyses of one splicing factor PTBP1 revealed its impact on disease-ass
193 In PH, miR-124, through the alternative splicing factor PTBP1, regulates the PKM2/PKM1 ratio, th
195 led functional analysis of the top candidate splicing factor, Ptbp1, revealed that it is a critical b
198 1213 created a putative binding site for the splicing factor RBFOX2 and was associated with increased
201 d Variants in the cardiomyocyte-specific RNA splicing factor RBM20 have been linked to familial cardi
205 Gsk3 DKO reduced phosphorylation of the splicing factors RBM8A, SRSF9, and PSF as well as the nu
213 Here, we identified 1723 AS events and 41 splicing factors regulated in a breast cancer cell model
214 ssion of proteins with relevant functions in splicing factor-related diseases both in association wit
215 15, a DEAH box containing RNA helicase, is a splicing factor required for the last step of splicing.
216 ered subnuclear organization specifically of splicing factors required for A complex formation, which
217 inding protein that associates with the core splicing factor RNA binding motif protein 39 (RBM39) and
220 genetic screens in C. elegans, we identified splicing factor RNP-6/PUF60 whose activity suppresses im
223 The RNA isoform repertoire is regulated by splicing factor (SF) expression, and alterations in SF l
228 metrically dimethylates arginine residues on splicing factor SF3B2 (SAP145) and has been functionally
231 Complete loss of function of the ubiquitous splicing factor SFPQ affects zebrafish motoneuron differ
232 ether, we uncover the axonal function of the splicing factor SFPQ in motor development and highlight
233 r-associated mutations in genes encoding RNA splicing factors (SFs) commonly occur in leukemias, as w
234 r approach identified lysine 130 of the mRNA splicing factor snRNP70 as a SETMAR substrate in vitro,
235 aH1 cells, as were some serine arginine rich splicing factor splicing activator and heterogeneous rib
240 tein phosphatase 1 (PP1) with the SR protein splicing factor (SRSF1) to understand the foundation of
241 kles, where it forms a complex with the mRNA splicing factor SRSF2 and alters its subnuclear localiza
242 the first report of viral antagonism of the splicing factor SRSF2 and identifies the viral protein t
244 Here we report that mutations affecting the splicing factor SRSF2 directly impair hematopoietic diff
246 ypoxia-induced expression and binding of the splicing factor SRSF3, and increased binding of total an
249 n caused increased levels of the cellular SR splicing factors (SRSFs) SRSF1 (ASF/SF2), SRSF2 (SC35),
250 e gene is controlled by serine/arginine-rich splicing factors (SRSFs), and HPV16 infection induces ov
251 nding motif protein 25 (RBM25) is a putative splicing factor strongly conserved across eukaryotic lin
252 red for the IE2's fourth intron to bind to a splicing factor such as U2AF65, as determined by an RNA
253 peats form hairpin structures that sequester splicing factors such as muscleblind-like 1 (MBNL1).
254 finding that human ARS2 also interacts with splicing factors suggests a conserved mechanism mediates
256 ional CAD risk genes, including the putative splicing factor SUGP1 Indeed, we found that rs10401969 r
258 oncentrating hormone receptor 1 (MCHR1), and splicing factor SWAP homolog (SFRS8)] was associated wit
259 The transcription elongation and pre-mRNA splicing factor Tat-SF1 associates with the U2 small nuc
260 omolog of human transcription elongation and splicing factor, TCERG1, has opposite effects on lifespa
261 NA binding motif protein 48 (RBM48) is a U12 splicing factor that functions to promote cell different
262 uclear ribonucleoprotein complex and several splicing factors that are commonly mutated in cancer.
265 k genes in fungi, plants, and flies, but the splicing factors that modulate these effects to ensure c
266 Serine-arginine (SR) proteins are essential splicing factors that promote numerous steps associated
267 eport suggesting that MCM7 is a critical RNA splicing factor, thus giving significant new insight int
268 this motif are necessary for the binding of splicing factors TIA1 and Pcbp1 and that these proteins
272 ole of combinatorial regulation by different splicing factors to fine tune gene expression programs d
273 ort on the impact of mutated or dysregulated splicing factors to hematopoiesis, mRNA splicing, and MD
274 P1 to RNAPIIo and for the recruitment of RNA splicing factors to the actively transcribed chromatin,
276 translocation of Hnrnpa1 and other pre-mRNA splicing factors to the nucleus in a transcription-depen
277 licing by sterically blocking the binding of splicing factors to the pre-mRNA, are a promising therap
278 s and association with alternative splicing (splicing factors), transcript abundance (AGO2) and mRNA
282 uclear localization and interaction with the splicing factor U2AF65, which promotes mRNA processing a
284 Here, we identified an additional pre-mRNA splicing factor, WBP11, as a novel protein required for
285 To understand how SRPK1 phosphorylates this splicing factor, we performed mass spectrometric and kin
286 licing event is likely regulated by multiple splicing factors, we identified the SRSF3 oncoprotein as
290 Since nuclear speckles are storage sites for splicing factors, which leave these sites to splice cell
291 that nuclear speckles are storage sites for splicing factors, which leave these sites to splice cell
293 erved Pir2(ARS2) protein in association with splicing factors, which recruit RNA processing and chrom
295 splicing include RNA-protein interactions of splicing factors with regulatory sites termed silencers
296 dicted that GMAS SNVs often alter binding of splicing factors, with SRSF1 affecting the most GMAS eve
299 s1076560(T) disrupted a binding site for the splicing factor ZRANB2, diminished binding affinity betw