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3 primate mammals, Liat1 genes of primates are subtelomeric, a location that tends to confer evolutiona
5 te postpatient cultures transcribed the same subtelomeric and central var genes, except for var2csa C
6 arasites carrying drug selectable markers in subtelomeric and central var loci and monitoring switchi
8 esults show that dog genes located either in subtelomeric and pericentromeric regions, or in short sy
11 tiation and replication fork movement in the subtelomeric and telomeric DNA of native Y' telomeres of
16 odes PHISTb (Plasmodium helical interspersed subtelomeric b) domain-containing RESA-like protein 1 ex
22 cated in spatial proximity to the repressive subtelomeric center, and colocalization of distinct grou
23 teractions have come from the study of yeast subtelomeric chromatin and its association with the NE,
24 R mutations, histone imbalances and aberrant subtelomeric chromatin as interconnected causes of gluco
25 t at each telomere the telomeric complex and subtelomeric chromatin cooperate to form a unique higher
26 sertion at different positions within silent subtelomeric chromatin in otherwise isogenic Saccharomyc
27 t from holo-NPCs and that it plays a role in subtelomeric chromatin organization and NE tethering.
28 y to be regulated by the organization of the subtelomeric chromatin rather than by a specific DNA ele
29 of various proteins necessary for tethering subtelomeric chromatin to the NE and the silencing of re
30 performs functionally distinct activities at subtelomeric chromatin versus the end of the chromosome,
31 In both cases, the ordered structure of the subtelomeric chromatin was disrupted, but the effect on
37 cription of telomere repeats can initiate at subtelomeric CTCF-binding sites to generate telomere rep
38 This gross structural difference places the subtelomeric defect underlying facioscapulohumeral muscu
40 ses of the breakpoint junctions suggest that subtelomeric deletions can be stabilized by both homolog
47 ound that there is a substantial fraction of subtelomeric DNA containing restriction sites that is no
48 hat, similar to yeast and humans, Drosophila subtelomeric DNA is evolving very differently from euchr
50 with previously reported data, reveals that subtelomeric DNA methylation controls the homeostasis of
51 s demonstrated no significant differences in subtelomeric DNA methylation, chromatin modifications, T
53 addition, we describe previously undetected subtelomeric DNA replication in G2/M and G1-phase-enrich
54 mania's genome duplication programme employs subtelomeric DNA replication initiation, possibly extend
56 been ascribed to the X-region, a segment of subtelomeric DNA that is resistant to being cut by restr
57 d association of de-ubiquitinase Ubp10p with subtelomeric DNA, as detected by chromatin immunoprecipi
58 panied by catastrophic loss of telomeric and subtelomeric DNA, high levels of end-to-end chromosome f
62 he Polycomb system that assembles repressive subtelomeric domains of H3K27 methylation (H3K27me) in t
63 form of a deacetylase complex assembles over subtelomeric domains that produces a heritable gene expr
64 specific sites including pericentromeric and subtelomeric domains, is dispensable for globule formati
67 l, telomere R-loops cause more telomeric and subtelomeric double-strand breaks (DSBs) and increase VS
69 brought telomeric RNA:DNA hybrids, telomeric/subtelomeric DSBs and VSG switching frequency back to WT
70 deletions and GCRs at both interstitial and subtelomeric DSBs, but has little effect on the frequenc
72 ms of ectopic DNA repair to the formation of subtelomeric duplications and find that non-homologous e
75 first possesses telomere repeats and the Y' subtelomeric element amplified together as a tandem arra
76 ed core X sequences revealed a role for this subtelomeric element in preventing telomeric recombinati
77 ence is the same at all chromosome ends, the subtelomeric elements (STEs) and level of TPE vary from
78 s subcomplement]) located at three different subtelomeric ends (1p, 6p, and 12p) whose expressions ar
80 study, we explored whether the regulation of subtelomeric epigenetic characteristics by DNMT3B is con
82 HEI10-mediated crossover increases occur in subtelomeric euchromatin, which is reminiscent of sex di
85 is transcribed from one of approximately 20 subtelomeric 'Expression Sites', but the role telomeres
87 ype is generated through the expression of a subtelomeric gene cluster containing genes that alter th
94 ne mutations, however, have little effect on subtelomeric gene repression or genome-wide expression,
96 de that DAC1 and DAC3 play distinct roles in subtelomeric gene silencing and that DAC3 represents the
97 Moreover, we find that deletion of SIR3, a subtelomeric gene silencing protein, inhibits silencing
99 Rather, the data revealed upregulation of subtelomeric genes and alteration of the repressive hist
101 ene silencing protein, inhibits silencing of subtelomeric genes associated with adaptation to loss of
109 ation of subtelomere-associated H2B, reduced subtelomeric H3K79 di-methylation, and increased binding
111 curred in humans, including the formation of subtelomeric heterochromatic caps, the hyperexpansion of
112 one modifications and piRNA transcription in subtelomeric heterochromatin (also known as telomere-ass
113 subtelomeres are abnormally hypomethylated, subtelomeric heterochromatin acquires open chromatin cha
114 nation in regions adjacent to centromeric or subtelomeric heterochromatin and add to our understandin
116 Although many shelterin mutations affect subtelomeric heterochromatin assembly, the mechanism rem
119 ining a structure consisting of a segment of subtelomeric heterochromatin that inserted into a cluste
121 ctions between shelterin subunits compromise subtelomeric heterochromatin without affecting CLRC inte
122 sequences included both repetitive gene-poor subtelomeric heterochromatin-like regions and their adja
126 tes, we see high frequencies of mutations in subtelomeric highly variable genes and internal var gene
127 y number variations, chromosomal inversions, subtelomeric hypervariation, loss of heterozygosity (LOH
131 ositively associated methylated CpG sites in subtelomeric loci (within 4 Mb of the telomere) (P < 0.0
133 ly of adhesins, which are encoded largely at subtelomeric loci, where they are subject to transcripti
134 e EPA genes, a family of adhesins encoded at subtelomeric loci, where they are subject to transcripti
138 xpression of TERRA in mice, we characterized subtelomeric methylation and associated telomeric functi
140 sequence analyses reveal that pieces of the subtelomeric patchwork have changed location and copy nu
141 genome, including segmental duplications and subtelomeric, pericentromeric, and acrocentric areas.
142 ns featuring Plasmodium helical interspersed subtelomeric (PHIST) domains has attracted attention, wi
143 ember of the Plasmodium helical interspersed subtelomeric (PHIST) superfamily with a calculated mass
145 ranscriptional repression of the specialized subtelomeric PTUs, the Bloodstream-form Expression-Sites
147 lications that cause some genomic disorders, subtelomeric rearrangements do not typically have recurr
151 equency varies at multiple scales, with high subtelomeric recombination and suppressed centromeric re
153 analysis reveals the presence of Hek2p at a subtelomeric region and HMR, its silencing effects at th
154 ng linkage disequilibrium between the distal subtelomeric region and the proximal telomere, which con
155 ts associated with terminal deletions of the subtelomeric region as well as the capture of a scramble
156 PCR fragment-length variation across the subtelomeric region indicated that the 1.4-kb distal reg
161 et of the D4Z4 macrosatellite repeats in the subtelomeric region of chromosome 4q causes facioscapulo
164 nogaster contains two distinct subdomains: a subtelomeric region of repetitive DNA, termed TAS, and a
165 f the heritable variation was explained by a subtelomeric region on chromosome 6; a genome-wide assoc
166 ional changes, Ada2 occupancy increases at a subtelomeric region proximal to a SAGA-inducible gene an
171 2 causes the spreading of Sir2 and Sir3 into subtelomeric regions and decreased histone H4 K16 acetyl
172 h CpG methylation density is correlated with subtelomeric regions and Giemsa-light bands (R bands).
173 some end remodeling with DNA breaks in their subtelomeric regions and loss of distal sequences includ
174 riantly expressed gene families localised at subtelomeric regions and variant gene expression based o
175 e recombination near telomeres is repressed, subtelomeric regions appear to recombine with each other
182 asis of gradually elevating G+C fractions in subtelomeric regions as a consequence of biased gene con
183 heterozygotes also remodel crossovers toward subtelomeric regions at the expense of the pericentromer
185 on450 BeadChip (Illumina) array, at specific subtelomeric regions containing GPR31 and SERPINB9 genes
188 tion changes have been described at specific subtelomeric regions in long-term meditators compared to
190 acetylation and loss of histones at specific subtelomeric regions in replicatively old yeast cells, w
191 oting genome stability at the rDNA locus and subtelomeric regions in the most common human fungal pat
195 risk for mutagenesis because they reside in subtelomeric regions of chromatin that are deficient in
196 hila are concentrated in pericentromeric and subtelomeric regions of the 5 micronuclear chromosomes,
198 e open reading frame), located mainly in the subtelomeric regions of the parasite's 14 chromosomes.
201 pitated with J antiserum, localized J within subtelomeric regions rich in life-stage-specific surface
202 mutation causes the spread of silencing into subtelomeric regions that are not normally silenced in w
205 proach, we show that Repo-Man is enriched at subtelomeric regions together with H2AZ and H3.3 and tha
206 leosome mapping revealed that Sir binding to subtelomeric regions was associated with overpackaging o
207 ing telomere dynamics, identifying 12 unique subtelomeric regions with variable detection efficiencie
210 nd at the ribosomal DNA locus, telomeres and subtelomeric regions, are unstable sites of eukaryotic g
211 s and contractions of known gene families in subtelomeric regions, both species also were found to ha
212 not globally alter Sir2 or Sir3 occupancy in subtelomeric regions, but only led to some telomere-spec
213 nd LTR elements, segmental duplications, and subtelomeric regions, but single-copy sequences rarely b
214 s, associated with transposable elements and subtelomeric regions, conserved across diverse human eth
215 d that hiPSCs lack appropriate 5hmC marks in subtelomeric regions, contributing to epigenetic variati
216 n resulted in clustering of intra- and inter-subtelomeric regions, demonstrating a novel role for SMA
217 TAG/TAA stop-codon replacements, deletion of subtelomeric regions, introns, transfer RNAs, transposon
218 architecture associated with centromeric and subtelomeric regions, it locally influences meiotic reco
219 htylated CpG islands was found in chromosome subtelomeric regions, suggesting a differential activity
220 Furthermore, FACT maintains nucleosomes in subtelomeric regions, which is crucial for their compact
237 - and cytosine (GC)-rich, highly recombining subtelomeric regions; low divergence states cover inner
238 normal and affected alleles (deleted for the subtelomeric repeat D4Z4) localize to the nuclear periph
239 osome-specific subtelomere sequences through subtelomeric repeat regions to terminal (TTAGGG)n repeat
240 Mb of subtelomeric DNA analyzed, 3.01 Mb are subtelomeric repeat sequences (Srpt),and an additional 2
241 ole of DNMT1 in the de novo methylation of a subtelomeric repeat, D4Z4, which is lost in cells lackin
248 ully correlated, suggestive of CTD-dependent subtelomeric repression mechansims that act independentl
251 elomerase regulator Rif1 results in elevated subtelomeric RNA levels while telomere-repeat containing
254 ublic draft and finished sequences to derive subtelomeric sequence assemblies for each of the 41 gene
255 k that leverages both protein divergence and subtelomeric sequence divergence to test the hypothesis
259 canonical structure, with 3-4 kb of a unique subtelomeric sequence, followed by several kilobases of
261 st genome sequences do not contain assembled subtelomeric sequences, and, as a result, subtelomeres a
262 tin at the regions adjacent to boundaries of subtelomeric sequences, which exhibit specific crossover
263 ple mutants progressively lost telomeric and subtelomeric sequences, yet grew for more than 1 year.
266 We show that SIR3 and RIF1 are required for subtelomeric silencing in C. glabrata and that RIF1 regu
274 TeR-independent expansion and contraction of subtelomeric tandem repeats; and a variety of rearrangem
275 tological studies, provide evidence that the subtelomeric TAS region exhibits features resembling het
277 identical transcriptome phenotypes, with new subtelomeric transcription in yeast, and greatly increas
279 3K9 and H3K27 acetylation and stimulation of subtelomeric transcripts, including telomere repeat-cont
282 anism by which the parasite proteins STEVOR (SubTElomeric Variable Open Reading frame) exert changes
283 ultigene families, var, rif, and stevor (for subtelomeric variable open reading frame), located mainl
284 ction of J is also located within the silent subtelomeric variant surface glycoprotein (VSG) gene exp
285 ozoan parasite, relies upon rearrangement of subtelomeric variant surface glycoprotein (VSG) genes to
286 Pol I-mediated transcriptional switching of subtelomeric variant surface glycoprotein genes, continu
287 an reference sequence, detect many new large subtelomeric variants and demonstrate the feasibility of
288 cal Rabl organization with colocalization of subtelomeric virulence genes, while the Toxoplasma gondi
291 ange, which is significantly stronger at the subtelomeric VSG loci than at chromosome internal loci.
292 mosome-internal recombination, it suppressed subtelomeric VSG recombination, and these locus-specific
293 ion-dependent manner and sustain the active, subtelomeric VSG-associated transcription compartment.
295 er, Exo1 is critical for generating ssDNA in subtelomeric X repeats and internal single-copy sequence
296 type IA pathway involves an amplification of subtelomeric Y' elements, coupled with elongated and mor
298 dependent reverse transcription of mRNA from subtelomeric Y' repeats generates chimeric Y'-Ty1 cDNA.