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1 e de novo biosynthesis of the DNA nucleotide thymine.
2 racil is reduced under similar conditions to thymine.
3 le blue redox probe conjugated to a modified thymine.
4 redox active probe conjugated to a modified thymine.
5 bound by the TALE (the N0 base) should be a thymine.
6 dation of A/T-rich DNA leads to mutations at thymine.
7 (dsDNA), it forms three hydrogen bonds with thymine.
8 s, and the third containing both adenine and thymine.
9 ractions is adenine > cytosine >/= guanine > thymine).1 Since the degree of gold-DNA affinity interac
10 ntrinsic preference for cytosine preceded by thymine (5'-TC) in single-stranded DNA substrates, where
14 amination of 5-methylcytosine (mC) generates thymine, a canonical DNA base, presenting a challenge fo
16 ences containing 10 deoxy-ribonucleotides of thymine, adenine, cytosine, or guanine results in the gr
17 asured by the slide parameter in the central thymine-adenine base pairs; we also detect 'dynamic' def
21 d established cell-tracking methods based on thymine analog cell labeling and developed tailored math
22 glycosylation step utilized en route to the thymine analogue clearly suggests the absence of anchime
23 nd 5-hydroxymethylcytosine (5hmC) as well as thymine and 5-hydroxymethyluracil (i.e., the deamination
26 We also show that cleavage of thymidine to thymine and deoxyribose-1-phosphate by the host thymidin
29 s on pyrimidine 5' methyl groups provided by thymine and requires adjacent guanines and a correctly o
30 for the generation and isolation of various thymine and thymidine 5,6-epoxides from the correspondin
31 d photoelectron spectroscopy is performed on thymine and thymidine in aqueous solution to study the e
32 ely 20%) for guanine over adenine, cytosine, thymine and uracil, but this selectivity is extraordinar
33 to prepare high-purity 4-arm PEG-T(20) (T = thymine) and 4-arm PEG-A(20) building blocks in multigra
34 demonstrate that SLC25A33 transports uracil, thymine, and cytosine (deoxy)nucleoside di- and triphosp
36 would provide a preference for cytosine over thymine, and the latter one could explain the E446D pref
38 atic rings and attached methyl groups (as on thymine) are particularly favorable, as previously obser
39 initially located on adenines, localizes on thymine as the proton is lost from the methyl group, dem
40 n bands for phenylalanine at 1001 cm(-1) and thymine at 747 cm(-1) Raman bands), were used to quantif
41 demonstrate the concept using the nucleobase thymine at the oxygen K-edge, and unambiguously show tha
42 ned with mutating the continuous sequence of thymines at position 4 to cytosine or guanine significan
43 The AR9 nvRNAP requires uracils rather than thymines at specific conserved positions of late viral p
45 irions up to 0.7 mum in diameter and adenine-thymine (AT)-rich genomes of up to 1.25 Mb encoding a th
47 find that short minimum loop length and the thymine base are two main factors that lead to high GQ f
48 tonated at N3, one-electron oxidation of the thymine base by Cl(2)(*-) at ca. 155 K results in format
49 cules at both ends of the CTG repeat induces thymine base flipping and DNA backbone deformation to fo
50 , calculations predict that the deprotonated thymine base has a lower energy barrier (ca. 6 kcal/mol)
54 cinoma cells, the levels of both - 5fC and a thymine base modification, 5-hydroxymethyluracil, are co
55 showing that installation of a 2-aminopurine-thymine base pair at the cross-linking site produced hig
57 of deuterium substitution at C5' and on the thymine base, that is, specifically employing [5',5"-D,D
62 share the feature that 5-methylcytosine and thymine both have a methyl group in the same position, 5
65 of peptides conjugated to the C5 position of thymine by human translesion synthesis polymerases leads
67 i stacking and an Au...O contact involving a thymine carbonyl group, resolving the ambiguity of conve
68 lfur substitution of a carbonyl group in the thymine chromophore at position 2 or 4 results in a sign
69 toms in the exocyclic carbonyl groups of the thymine chromophore by sulfur atoms results in a remarka
70 A due to the formation of the thymine-Hg(2+)-thymine complex, which holds the Hg(2+) ions in proximit
74 In the reactions, additional nucleobases (thymine, cytosine, adenine, or guanine) were attached to
75 culated the electronic excitation spectra of thymine, cytosine, and adenine stacked dimers with ab in
76 onates with the natural nucleobases adenine, thymine, cytosine, and guanosine has been performed.
77 ibacterial and chemotherapeutic drugs elicit thymine deficiency, a mechanistic understanding of this
78 Under these growth conditions, accelerated thymine depletion is the primary trigger of the processe
82 lineC/C-C stretch vibrations) of cyclobutane thymine dimer and thymine dinucleotide radical anion, th
83 ms error-free bypass of the 8-oxoguanine and thymine dimer DNA lesions, though with a 10(3) and 10(2)
85 PL) repairs 5-thyminyl-5,6-dihydrothymine, a thymine dimer that is also called the spore photoproduct
86 A by converting two adjacent thymines into a thymine dimer which is potentially mutagenic, carcinogen
87 d in UV-irradiated bacterial endospores is a thymine dimer, 5-thyminyl-5,6-dihydrothymine, i.e., the
89 ct lyase (SPL) repairs a covalent UV-induced thymine dimer, spore photoproduct (SP), in germinating e
91 s value is comparable to that of cyclobutane thymine dimers (the major UV-induced lesions) in genomic
93 de currents in osteoblasts, had no effect on thymine dimers on its own but prevented the 1,25(OH)(2)D
96 IDS, at concentrations that had no effect on thymine dimers, blocked UVR-induced upregulation of p53.
97 oride currents help protect from UVR-induced thymine dimers, but further increases in p53 or reductio
103 vibrations) of cyclobutane thymine dimer and thymine dinucleotide radical anion, thymidylyl(3'-->5')t
104 excision of the latter oxidation products by thymine DNA (TDG) or Nei-like 1 (NEIL1) glycosylases fol
105 ipping assay to study damage search by human thymine DNA glycosylase (hTDG), which initiates BER of m
106 easoned that the base excision repair enzyme thymine DNA glycosylase (TDG) could be such a target for
110 aC), with 5fC and 5caC subject to removal by thymine DNA glycosylase (TDG) in conjunction with base e
111 nd T:G mispair, and this step is followed by thymine DNA glycosylase (TDG) initiated base excision re
116 slocation (TET) enzymes (TET1/TET2/TET3) and thymine DNA glycosylase (TDG) play crucial roles in earl
117 g a panel of DNA demethylases, we found that thymine DNA glycosylase (TDG) up-regulated Wnt signaling
118 relationship between chromatin structure and thymine DNA glycosylase (TDG) using chemically defined n
119 oxylcytosine (caC), excision of fC or caC by thymine DNA glycosylase (TDG), and restoration of cytosi
120 oxylcytosine (caC), excision of fC or caC by thymine DNA glycosylase (TDG), and subsequent base excis
121 aC are selectively recognized and excised by thymine DNA glycosylase (TDG), leading to DNA demethylat
122 e bases are recognized by the monofunctional thymine DNA glycosylase (Tdg), which cleaves the glycosi
123 ollowed by replication-dependent dilution or thymine DNA glycosylase (TDG)-dependent base excision re
124 to cytosine through iterative oxidation and thymine DNA glycosylase (TDG)-mediated base excision rep
132 rvation was paralleled by a compromised TDG (thymine DNA glycosylase) and TET1 (ten-eleven translocat
133 CadC, and 5-HmdU, may be cleaved from DNA by thymine DNA glycosylase, and subsequent action of base-e
134 regeneration-associated genes in a Tet3- and thymine DNA glycosylase-dependent fashion in DRG neurons
136 paired to regenerate unmodified cytosines by thymine-DNA glycosylase (TDG) and base excision repair (
140 s not influenced by either UNG1/2, SMUG1, or thymine-DNA glycosylase knockdown, strongly suggesting t
141 n of UNG1/2 but not by knockdown of SMUG1 or thymine-DNA glycosylase uracil-DNA glycosylases, proving
144 als that TDG attains context specificity for thymine excision through modulation of nucleotide flippi
145 rved that A3G favors adenines, cytosines and thymines flanking the cytosine dinucleotide target in un
147 th absence of -7T, the very highly conserved thymine found at the last position in -10 elements of pr
149 are three types of glycosylases that excise thymine from G.T mispairs, including thymine DNA glycosy
150 Initiating base excision repair, TDG removes thymine from mutagenic G .: T mispairs caused by 5-methy
153 cated that the population of WC-like guanine-thymine (G-T) mispairs depends on the environment, such
154 (T-Hg-T): in fact, Hg(2+) tends to bind two thymines, generating a T-Hg-T complex with a formation c
156 Here, we show that telomeric DNA containing thymine glycol (Tg), 8-oxo-7,8-dihydroguanine (8-oxoG),
157 dative DNA lesions, 8-oxoguanine (8oxoG) and thymine glycol (Tg), regulate the structural properties
158 capable of quantifying the rate of repair of thymine glycol in a variety of human cells with a high d
163 of this tract by adding adenines instead of thymines had similar effects, while the addition of othe
167 emical biosensor is developed by integrating thymine-Hg(2+)-thymine (T-Hg(2+)-T) base pairs for the h
169 ble-stranded DNA due to the formation of the thymine-Hg(2+)-thymine complex, which holds the Hg(2+) i
170 sensors through the formation of the complex Thymine-Hg-Thymine (T-Hg-T): in fact, Hg(2+) tends to bi
171 ement of the fluorine substituent with H6 of thymine, however, with a distance that is relatively lon
172 (4444)](+)) hydroxide with adenine (HAd) and thymine (HThy) led to hydrated salts of deprotonated ade
173 editors also convert cytosine to guanine or thymine in a narrow editing window (positions 5-7) and i
174 btained data, the main oxidation products of thymine in aqueous solution could most likely be identif
177 or the Raman red shifts of phenylalanine and thymine in response to (13)C-labeling is proposed in thi
178 with significantly more cytosines mutated to thymine in the lagging-strand template (LGST) than in th
179 576 (R576) to interact, respectively, with a thymine in the minor groove, a phosphate group of DNA ba
180 thyluracil, is an epigenetic modification of thymine in the nuclear DNA of flagellated protozoa of th
184 Sequencing of the katA gene demonstrated a thymine insertion leading to a frameshift mutation and p
185 light damages DNA by converting two adjacent thymines into a thymine dimer which is potentially mutag
186 omoazanucleoside containing both adenine and thymine, is a left-handed helix formed through Watson-Cr
187 a small molecule, cyanuric acid, with three thymine-like faces, reprogrammes the assembly of unmodif
188 es has been used as a tool to populate upper thymine-like triplet states via intramolecular sensitiza
191 e-pair steps with thymine versus uracil, the thymine methyl group tends to enhance the strength of th
197 o-chemical properties of DNA produced by the thymine modifications may have implications for recognit
198 te nanopores, short DNA fragments containing thymine modifications were found to exhibit distinct, re
199 hemical method to selectively tag and enrich thymine modifications, 5-formyluracil (5-fU) and 5-hydro
200 ns were chromatographically determined using thymine-modified complements that increase the overall c
202 ng two adenine molecules, the other with two thymine moieties, and the third containing both adenine
206 e also show that the predominant cytosine-to-thymine mutations observed in single-cell genomics often
208 e, with the substitution of a cytosine for a thymine nucleotide (C64T) at codon 22, leading to a prem
209 o one-electron oxidized thymidine (dThd) and thymine nucleotides in basic aqueous glasses is investig
211 lesion, the most common oxidation product of thymine, occurs via two alternative pathways, in one of
213 ng the duplex length and mutating the fourth thymine of the continuous sequence of thymines to cytosi
215 e (TDG) excises the mismatched base, uracil, thymine or 5-hydroxymethyluracil (5hmU), as well as remo
217 odified phosphoramidites carrying additional thymine or adenine attached to the 2'-position of arabin
219 he neutral loss of a base (guanine, adenine, thymine, or cytosine) was added to the original methodol
221 rotonated adenine, [N(4444)][Ad].2H(2)O, and thymine, [P(4444)][Thy].2H(2)O, as well as the double sa
223 we investigated the role of a homopolymeric thymine [poly(T)] tract -50 to -33 relative to the sabA
224 ce is slightly greater for binding at the 5' thymine position than at the 3' thymine position, presum
225 ng at the 5' thymine position than at the 3' thymine position, presumably because of stabilization ar
226 ynamically favored over dGTP binding at both thymine positions of the TTD, most likely due to more pe
227 tyl)-3-O-nosyl-2-deoxy-beta-D-lyxofuranosyl] thymine precursor on the EWOD chip starting from the fir
229 revealed three metabolites (6% of Tp dose): thymine propenoate and two mercapturate derivatives of g
230 a conserved cysteine donates a H atom to the thymine radical, resulting in a putative thiyl radical.
232 ther base reduced the blockage, cytosine and thymine reduced the blockage more significantly than ade
233 thymidine depletion, and supplying exogenous thymine rescues both nucleotide levels and cell prolifer
234 ethylated cytosine occupies one of the inner thymine residues corresponding to the AP-1 element, resu
235 Therefore, the SP structure where the two thymine residues maintain a stacked conformation likely
237 tigation of DNA containing methyl-deuterated thymine reveals a large isotope effect establishing that
239 er the activity of Exo III toward a designed thymine-rich DNA oligonucleotide (e-T-rich probe) by the
241 ode putative transmembrane domains, and that thymine-rich intergenic regions harbor a widespread pote
242 ansmembrane polypeptides emerge de novo from thymine-rich non-genic regions and subsequently accumula
243 th ssDNA based linker in the middle and poly thymine sequences on both 3' and 5' ends as a template f
245 lity of GM-strains of Bacteroides to survive thymine starvation and overcome it through the exchange
246 e and origin-proximal DNA degradation during thymine starvation have now been quantified via whole-ge
250 mage include a high frequency of cytosine to thymine substitutions (C-to-T) at the ends of fragments,
254 quence d(TG4T) contains only guanine (G) and thymine (T) bases and has medical and nanotechnological
256 iro-oxetanoribonucleosides of uracil (U) and thymine (T) in 37 and 45% overall yields, respectively.
257 s, for example guanine (G), adenine (A), and thymine (T) in a beef and chicken livers samples to meas
258 he length (6, 10, or 14 bases) and identity (thymine (T) or adenine (A)) of the spacer connecting the
259 helix with the base pairs of adenine (A) and thymine (T) or cytosine (C) and guanine (G), but G-rich
262 (Adenine (A), Guanine (G), Cytosine (C), and Thymine (T)) on single-stranded DNA (ssDNA) and double-s
267 vely, the initial chromosomal replication in thymine (T)-starved cells could reflect a considerable e
268 ng, we introduced multiple Hg binding units (thymine (T)-T pairs) in a molecular trawl made of two po
269 r is developed by integrating thymine-Hg(2+)-thymine (T-Hg(2+)-T) base pairs for the high selectivity
271 ough the formation of the complex Thymine-Hg-Thymine (T-Hg-T): in fact, Hg(2+) tends to bind two thym
272 report for Cu nanocluster nucleation on ploy thymine tails of ssDNA which performed in two reduction
274 icient at mutating 5-methylcytosine (5mC) to thymine than APOBEC3A in a genetic assay and was at leas
277 seq), unmodified C, 5fC and 5caC are read as thymine; thus 5fC and 5caC cannot be distinguished from
278 xperimental and computational approach, that thymine (Thy) molecules diffuse through the pores of the
280 t known for its ability to bypass UV-induced thymine-thymine (T-T) dimers and other bulky DNA lesions
282 le against skin cancer caused by cyclobutane thymine-thymine dimers (TTDs), a frequent form of DNA da
285 hen sequenced with SLAMseq, which introduces thymine to cytosine (T>C) conversions at the sites of th
286 fourth thymine of the continuous sequence of thymines to cytosine or guanine significantly, and somet
290 adenine moieties of Poly A nanocapsules and thymine/uracil does not affect the fluorescence of poly
291 n both nucleic acids, is highly specific for thymine/uracil, and maintains and slightly stabilises th
294 seq, both cytosines and 5mCs are read out as thymines, whereas only 4mCs are read out as cytosines, r
295 es unmethylated cytosines to be sequenced as thymine, which allows methylation levels to reflected in
296 higher than that one of the coupling Adenine-Thymine, which can be employed for a selective, fast and
297 first guanine and the next two guanines by a thymine, which forms a single-residue bulge and is proje
298 with a 10-nucleotide ssDNA composed of poly-thymine, which reveals a novel positively charged nuclei
299 duplex and contains a continuous sequence of thymines, which is the pause signal for RNA polymerase I
300 t, we noted the hydantoin ring of dGh mimics thymine, while the iminohydantoin ring of dIa mimics cyt