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1             In vitro translation studies and toeprint analyses also indicated that fst expression is
2                       Gel mobility shift and toeprint analyses demonstrate that CsrA binds cooperativ
3                                              Toeprint analyses performed to map the positions of stal
4                                              Toeprint analysis demonstrated that purified RNA II was
5                                              Toeprint analysis revealed that in vitro formation of a
6                                Additionally, toeprinting analysis of miRNA-targeted mRNAs demonstrate
7 tro translation by E. coli cell extracts and toeprinting analysis of transcripts encoded by the chlor
8                                              Toeprinting analysis shows that different positions with
9                                              Toeprinting analysis shows that pre-translocation comple
10                 Primer extension inhibition (toeprint) analysis to measure ribosome binding demonstra
11                 Primer-extension inhibition (toeprint) analysis with 30 S ribosoma subunits, tRNAMet,
12                                 Results from toeprint and cell-free translation experiments indicate
13                                              Toeprint and cell-free translation results indicated tha
14                                              Toeprint and cell-free translation studies demonstrate t
15 om S. lividans were isolated and included in toeprint and filter binding assays with leadered and lea
16                                   Additional toeprint and in vitro translation analyses demonstrated
17                Furthermore, the results from toeprint and in vitro translation experiments indicate t
18           Results from gel shift, footprint, toeprint and in vitro translation experiments indicate t
19                                 Results from toeprint and RNA-directed cell-free translation experime
20                                  Here we use toeprinting and polysome profiling assays to delineate r
21 S1 subunits do not support standby-dependent toeprints and TisB translation in vitro.
22           Using primer extension inhibition (toeprint) and filter binding assays to measure ribosome
23      By using extension inhibition analysis (toeprinting) and RNA electrophoretic mobility shift assa
24 Results from cell-free translation, ribosome toeprint, and RNA structure mapping experiments demonstr
25       40S subunit binding generated the same toeprint as 80S ribosomes but also additional ones near
26 e of interactions that are not stable in the toeprint assay.
27 79 of the 23 S rRNA, respectively, using the toeprint assay.
28  pseudoknot upstream from the AUG codon, the toeprinting assay revealed 40S ribosomal subunits trappe
29                              Here, we used a toeprinting assay to how that streptomycin, neomycin, ka
30                                  The refined toeprinting assay was used to confirm context-dependent
31                                     When the toeprinting assay was used with mRNAs that initiate tran
32 chanism using a primer-extension inhibition (toeprint) assay in a homologous N. crassa cell-free tran
33               A primer extension inhibition (toeprint) assay was developed using ribosomes and riboso
34   Here we use a primer extension inhibition (toeprinting) assay to delineate ribosome positioning and
35 bed for using a primer extension inhibition (toeprinting) assay to study the initiation step of prote
36                          A primer extension (toeprinting) assay was used to monitor selection by ribo
37                                              Toeprinting assays showed that CsrA competes effectively
38                                              Toeprinting assays suggested that CsrA binding causes ch
39                                With ribosome toeprinting assays, we determined that both suppressor m
40 somes, based on primer extension inhibition (toeprint) assays and reporter synthesis assays, a window
41 gal extracts by primer extension inhibition (toeprint) assays showed that these AAPs acted similarly
42 ested as a 2 nucleotide forward shift of the toeprint attributed to pretermination complexes that lea
43  the polypyrimidine residues and generated a toeprint consistent with binding to this region.
44 e-specific regulation was retained revealed "toeprints" corresponding to ribosomes positioned at the
45  ad3.7 and ad3.10, but not wt MetNS3, formed toeprints downstream of the initiator AUG codon in an as
46               Results from ribosome and TRAP toeprint experiments indicated that the ribosome and TRA
47 identical band was also detected in in vitro toeprinting experiments after the addition of YoeB to th
48 identical band was also detected in in vitro toeprinting experiments when YafO was added to the react
49 some to produce an in vivo single-nucleotide toeprint of the 5' position of the ribosome.
50 s unusual regulatory element, we adapted the toeprinting (or reverse transcriptase extension inhibiti
51  repeats were protected by bound TRAP, while toeprint results suggest that nine triplet repeats contr
52 luorescence anisotropy experiments, ribosome toeprinting results, in vitro translation assays, and cr
53   However, extension inhibition experiments (toeprinting) showed that IF3 retained its ability to dis
54 0 nucleotides upstream of this site; and the toeprint signal corresponding to ribosomes at the downst
55         At high arginine concentrations, the toeprint signal corresponding to ribosomes at the uORF t
56               Generally, the IFs reduced the toeprint signal on leadered mRNA; however, incubation of
57 iator tRNA reactions that yielded weak or no toeprint signals still formed complexes in filter bindin
58  while coupled-transcription-translation and toeprint studies demonstrated that CsrA regulates CstA s
59 nation codon rapidly increased; a new, broad toeprint that represents additional ribosomes stalled on
60  analyzed by primer extension) analysis, and toeprinting, we found that (i) 40S subunits bind to BTE
61  independently; mRNA movement was assayed by toeprinting, while tRNA and ASL movement was monitored b