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1 mplex with lipid A disaccharide backbone and unliganded.
2 lcholine- (POPC-) only nanodiscs in both the unliganded (4.1- angstrom resolution) and agonist-bound
3 equilibrium constants, we estimate that the unliganded AChR gating constant is E(0) approximately 6.
4 n AChRs is approximately 1.15 x 10(-7); (ii) unliganded AChRs open for approximately 80 micros, once
5 ystal structure of a synaptic tetramer of an unliganded activated mutant (M114V) of the G-segment inv
7 ich hinders the conformational change of the unliganded alpha-CT required for binding of a second IGF
8 T forms a rigid beam-like structure with the unliganded alpha-CT, which hinders the conformational ch
9 rikingly different conformations of LIMBS in unliganded alphaIIbbeta3 versus alphaVbeta3, the result
10 s CD4-bound state, compare this structure to unliganded and antibody-bound forms to identify structur
11 1 ortholog from the giant Mimivirus (MvNei1) unliganded and bound to DNA containing tetrahydrofuran (
12 ions (CDRs) of the TCR seen in comparison of unliganded and bound X-ray structures, NMR characterizat
13 igate full-length, glycosylated HIV gp120 in unliganded and CD4-bound forms by using small-angle X-ra
15 ot bind to the YecSC transporter and closed, unliganded and closed, liganded forms that bind this tra
16 onding loop in MvNei1 is ordered in both the unliganded and furan-bound structures, unlike other Fpg/
17 namics, respectively, demonstrates that both unliganded and glucose-bound enzymes sample multiple con
19 utative binding region of SrpA (SrpABR) both unliganded and in complex with a synthetic disaccharide
21 results uncover a paradoxical action of the unliganded and ligand-activated PPARgamma in regulating
24 genes, we identified genes regulated by the unliganded and liganded forms of ERalpha and ERbeta in U
28 s shows that they are tightly coupled in the unliganded and single agonist-bound form and only upon b
31 nogen o-gp140DeltaV2TV1, in both its native (unliganded) and CD4-induced (liganded) states by cryoele
32 AR adopted a conformation that resembled the unliganded AR (apo-AR), precluding nuclear localization
33 of heat shock protein (HSP90) that binds to unliganded AR in the cytoplasm, restricting its entry in
34 with AR-FL to induce nuclear localization of unliganded AR-FL, AR-V7 does not need to interact with A
38 in ANS emission observed in the presence of unliganded ATH reflects the interaction of these hydroph
39 ts a compact or "closed" domain arrangement, unliganded avian SC is flexible and exists in both close
40 egulatory sites; ii) a simulated ensemble of unliganded Bcl2 structures reveals extensions of a known
44 lex, and (d) the binding interaction between unliganded C-Mad2 and Cdc20 cannot be catalyzed by a C-M
45 a C-Mad2-Cdc20 complex >300-fold slower than unliganded C-Mad2, (b) a stable C-Mad2-Mad1 core complex
47 arison of the structures of the liganded and unliganded CAP suggests that cAMP stabilizes the active
49 this electrostatic interaction also promotes unliganded channel opening in the absence of ATP binding
52 structural models that likely represent the unliganded closed-channel conformation and the fully lig
53 nto lipid nanodiscs that are captured in the unliganded (closed), glycine-bound (open and desensitize
57 ranched-chain amino acids, we concluded that unliganded CodY cannot repress transcription in vivo and
58 ghts, we determined the crystal structure of unliganded CodY from Bacillus subtilis revealing a 10-tu
60 e that PBPs typically adopt either an "open" unliganded configuration or a "closed" liganded one.
62 s of the so-far structurally uncharacterized unliganded conformation of HIV-1 gp120, which may prove
63 that bind conserved epitopes exposed on the unliganded conformation of the HIV-1 envelope glycoprote
64 econdary structure elements reveals that the unliganded conformations of both glycoprotein (gp)120 an
66 tically, we determined crystal structures of unliganded core gp120 from HIV-1 clades B, C, and E.
68 re, we report the X-ray crystal structure of unliganded DCS at 2.4 A resolution and the structure of
70 tically for the liganded complex compared to unliganded demethylase, which may correspond to the obse
71 ngaging the proapoptotic activity induced by unliganded dependence receptors are in late-stage precli
72 gate directly the effect of the JM domain on unliganded dimer stability of FGFR3, a receptor that is
73 ns are critical for the establishment of the unliganded dimer structure, and for the transition to th
74 point to a coordinated stabilization of the unliganded dimeric state of FGFR3 by its JM and TM domai
78 ny of these receptors are capable of forming unliganded dimers that are likely important intermediate
80 ctures of B3GNT2 have been determined in the unliganded, donor substrate-bound, acceptor substrate-bo
81 liganded during human pregnancy, it becomes unliganded during both term and preterm labour as a resu
82 that exploited the repressor capacity of the unliganded EcR, making it a hormone-controlled gateway f
83 presses genes that are normally repressed by unliganded EcR, thereby allowing wing patterning to prog
85 catalytic phosphorylation of tyrosine 845 on unliganded EGFR monomers is suppressed by vesicular recy
86 region studied in the context of either CD4-unliganded Env trimer or the gp41 peptide in the unbound
87 contribute to interprotomer contacts in the unliganded Env trimer, undergo rearrangement upon CD4 bi
91 s where the loop is generally ordered in the unliganded enzyme or in complexes with a lesion, and dis
92 ed to the catalytic site than in the case of unliganded enzyme or the WT enzyme-Mg(2+)-3-hydroxygluta
95 atible with substrate binding as seen in the unliganded enzyme; (ii) the active "on state" seen in in
97 Indeed, our data reveal that activation by unliganded ERalpha and repression by estrogen-activated
98 emonstrated that in MCF7 breast cancer cells unliganded ERalpha binds to more than 4,000 chromatin si
99 re, these results suggest a pivotal role for unliganded ERalpha in controlling a fundamental caretake
101 ased upon ERalpha silencing, suggesting that unliganded ERalpha participates, together with other fac
102 t virtually no gene regulation occurred with unliganded ERalpha, whereas many genes were regulated by
103 strogen-induced binding sites, we found that unliganded-ERalpha binding is specifically linked to gen
105 ing, imply that the tethered conformation of unliganded ErbBs evolved to prevent crosstalk among ErbB
108 estrogen, the results demonstrate a role for unliganded ESR1 in CYP3A4 expression consistent with unl
109 ed ESR1 in CYP3A4 expression consistent with unliganded ESR1 signaling reported in other cell types.
111 Trp/Arg(H100)Trp double mutant (1E9dm) as an unliganded Fab at 2.05 A resolution and in complex with
113 his approach we observed homodimerization of unliganded FGFR1 that is independent of its surface dens
115 rmation being significantly populated in the unliganded FKBP51 domain is more consistent with a confo
116 xide (TMAO), an osmolyte that stabilizes the unliganded folded form of the protein, enabled us to stu
117 otein fromPseudomonas putidaCSV86 (ppGBP) in unliganded form (2.5 A) and complexed with glucose (1.25
118 g from Archaeoglobus fulgidus, AfUbiA, in an unliganded form and bound to Mg2+ and two different isop
119 the X-ray crystal structures of NolR in the unliganded form and complexed with two different 22-base
120 ructures of the catalytic domain of hPARG in unliganded form and in complex with three inhibitors: AD
126 conformational equilibrium between an open, unliganded form that does not bind to the YecSC transpor
127 e report the structure of this domain in its unliganded form, allowing definition of the structural c
128 of the catalytic core of yeast Pol alpha in unliganded form, bound to an RNA primer/DNA template and
129 ural snapshots of EndoBT-3987, including the unliganded form, the EndoBT-3987-Man(9)GlcNAc(2)Asn subs
133 ructural comparisons of various liganded and unliganded forms of CCR and CAD2 highlight substantial c
134 uctural comparisons of antibody-liganded and unliganded forms of CD3epsilon from a single species, wh
137 (proportional, variant 1/KD(in)) and slower unliganded "free" carrier transit from inside to outside
139 dels of predominant solution conformation of unliganded full-length Myo1c and Myo1c bound to Neph1 we
140 ti-CD4i MAbs, including MAb 21c, which bound unliganded, full-length gp120 held in a constrained conf
143 y mutations of these prolines with regard to unliganded gating (DeltaG0) and the affinity change for
144 ng equilibrium constant only by changing the unliganded gating equilibrium constant (E(0)) and did no
147 steric" cycle as follows: diliganded gating, unliganded gating, dissociation from the C(losed) confor
149 proteolysis, we map the site of disorder in unliganded GCK to a 30-residue active-site loop that clo
151 loop and quaternary interactions restraining unliganded gp120 from "snapping" into this conformation.
152 extraordinary reduction in entropy, neither unliganded gp120 nor free CD4 was substantially unstruct
154 ence suggests are proximal to the V3 loop in unliganded gp120, also resulted in decreased gp120-gp41
157 cells, we observed that beta-arrestin-1 and unliganded GR interact in the cytoplasm and that, follow
158 catenin binding partners, indicating that an unliganded groove is absolutely required for an orientat
160 putational methods to distinguish individual unliganded HA trimers from those that have bound C179 an
161 tabilizing its open state and the opening of unliganded HCN1, which occurs as though already disinhib
162 strate here that in epidermal keratinocytes, unliganded heterodimers of vitamin D receptor (VDR)/RXR-
163 found moderate levels of PAG associated with unliganded HIV-1 and SIV virions incubated with the thre
167 e beta/alpha-barrel structures with those of unliganded HMGCL and R41M reveals substantial difference
169 Here we report the 2.6A crystal structure of unliganded human SC (hSC) and comparisons with a 1.7A st
170 FbpA, including one in which the protein was unliganded (i.e., apoFbpA) and one in which the protein
171 conformation between the IDE-ATP complex and unliganded IDE, but regions of the active site and C-ter
172 ed at the heterotetrameric interfaces in the unliganded IDH hetero-octamer are reduced in the ligand-
173 lin bound that allows direct comparison with unliganded IR and suggests a mechanism by which ligand r
176 d structure, we report two structures of the unliganded light chain with and without the Zn(II) cofac
178 rier complex requires a higher proportion of unliganded low-affinity inside sites (proportional, vari
179 n crystals, the liganded (high-affinity) and unliganded (low-affinity) conformations differ in orient
180 hat 1) the Fab-Fc or Fab-Fab interactions in unliganded mAbs are retained in digested products, and 2
182 In X-ray solution structures, the CARDs in unliganded MDA5 are flexible, and RNA binds on one side
183 lasmic reticulum (ER) contains a pool of two unliganded MR1 conformers stabilized via interactions wi
184 mical and structural studies reveal that the unliganded, multidomain cIAP1 sequesters the RING domain
186 tation alters ectodomain structure such that unliganded mutant EGFR adopts an extended, dimerization-
188 leading to the loosening of a flap, which in unliganded NMT structures, occludes the protein substrat
192 etrahedral oxydianions, which bind weakly to unliganded OMPDC and tightly to the enzyme-transition st
194 rably larger than DHEA, can bind only to the unliganded (open) enzyme, whereas DHEA binds both the op
195 me), could be appropriately explained by the unliganded, open crystal structure in that it both yield
197 d drugs, the lack of a BmrR structure in its unliganded or apo (DNA free and drug free) state hinders
198 there are several structures of Nei enzymes unliganded or bound to an abasic (apurinic or apyrimidin
199 t be coupled to intracellular asymmetry with unliganded partners favoring the activator kinase positi
200 They also suggest possible actions of the unliganded (passive) gating ring or added short tails on
202 ned from small angle x-ray scattering of the unliganded PimA and the PimA.GDP complexed forms clearly
205 nd negated RANTES induction, suggesting that unliganded PPARgamma is obligatory for NF-kappaB signali
206 end point of IFN activation, indicating that unliganded PR alone could decrease transcription of ISGs
208 enome-wide microarray analyses revealed that unliganded PR-B induced robust expression of a subset of
214 e stability of hemoglobin concluded that the unliganded protein is only stable in the T state when a
215 most bound-like conformation in ensembles of unliganded protein structures and providing input for fr
216 ntegral component of secretory Abs, or as an unliganded protein that can mediate interactions with ba
217 t to be detectable from the structure of the unliganded protein, even when substantial conformational
221 ilon-methionine and obtained HSQC spectra of unliganded receptor as well as receptor bound to an inve
223 epends on both the intrinsic tendency of the unliganded receptor to open and the amount of agonist bi
224 reveal the presence of a minor population of unliganded receptor, with the signature outward TM6 disp
226 showed a ratio that was identical to that of unliganded receptors, agonist-bound D2 receptor-ligand c
229 previously, flavonoids also bind directly to unliganded rod opsin, enhancing its folding, stability,
231 ing pocket, which was previously observed in unliganded RT, is dramatically suppressed by efavirenz.
232 port the room temperature X-ray structure of unliganded SARS-CoV-2 3CL M(pro), revealing the ligand-f
239 nooxygenase, stachydrine demethylase, in the unliganded state (at 1.6 A resolution) and in the produc
241 Env proteins are kinetically trapped in the unliganded state and require the drug to negotiate CD4-i
244 g cavity of CD1a is largely preserved in the unliganded state because of persistent electrostatic int
246 ane envelope glycoprotein that stabilize the unliganded state by modulating the transitions from the
247 v to change conformation from the metastable unliganded state in response to the binding of ligands (
248 the overall shape of ct-AChBP in the apo or unliganded state is similar to that of homologues with k
249 ciency virus (SIV) must be maintained in the unliganded state of the envelope glycoprotein trimer.
251 d roughly 20-fold more rapid exchange in the unliganded state than regions of low diversity (outer do
252 gp120 and regulates Env transitions from the unliganded state to downstream conformations.IMPORTANCE
255 in decreased gp120-gp41 association (in the unliganded state) and decreased chemokine receptor bindi
256 rimeric Env displayed on native HIV-1 in the unliganded state, in complex with the broadly neutralizi
257 istic insights into the metastability of the unliganded state, receptor-induced conformational change
258 tes HIV-1 entry by rearranging from a mature unliganded state, through receptor-bound intermediates,
264 th the cytoplasm and nucleus that stabilizes unliganded steroid receptors, controls the catalytic act
266 chanism of control involving deformations in unliganded structure from a functionally critical state
267 on where a region that was disordered in the unliganded structure is now observed in the active site
268 Here we report the first, to our knowledge, unliganded structure of EBOV GP, and high-resolution com
272 ximab; however, unlike Cetuximab, one of the unliganded structures in S25-26 shows significant order
274 lex at a resolution of 2.1 A, as well as the unliganded structures of D8 and LA5-Fab at resolutions o
275 ) and murine PlxnA2(1-4)-Sema6A(ecto)), plus unliganded structures of PlxnA2(1-4) and Sema6A(ecto).
276 mGluR2/7 shows cooperativity in which an unliganded subunit greatly enhances activation by agonis
278 tal structure of the catalytic domain of the unliganded TbrPDEB1 and its use for the in silico screen
280 stid PDECs and the crystal structures of the unliganded TcrPDEC1 catalytic domain and its complex wit
283 g a simple two-state transition from an open-unliganded to closed-liganded state during the transport
285 nce and presence of hormone, suggesting that unliganded TR engagement with repressive complexes on ch
287 er examine NCoR1's role in repression by the unliganded TR, we deleted NCoR1 in the livers of euthyro
289 bility of developing selective modulators of unliganded transcription factors to dial out adverse eff
291 ion of the stability of the V3 pocket in the unliganded trimer or disruption of favorable V3/pocket i
294 angement similar to that displayed by native unliganded trimers on the surface of intact HIV-1 virion
295 erative pathways and a new pathway involving unliganded TrkA and transcriptional regulation of the pr
296 apidly on CD4-liganded virions and slowly on unliganded virions, although both reached similar levels
298 n retained the monomer-to-dimer ratio of the unliganded wild-type TNFR1 but exhibited no ligand bindi
300 nded CAP containing a D138L mutation and the unliganded WT CAP were determined at 2.3 and 3.6 A resol